miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 224 bits (113), Expect = 4e-58
Identities = 152/165 (92%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 84 agcaaaatgaatgaatctacactctaaagtatgtctatatacatccgtatgtagtccact 143
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61 agcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtccatt 120
Query: 144 aatgaaatctttttgaagacttatatttaggaacgaagggagtag 188
| |||||||| | |||||||||||||||||||| |||||||||
Sbjct: 121 agtgaaatctctacaaagacttatatttaggaacggagggagtag 165
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcacta 68
|||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcacta 120
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 159 aagacttatatttaggaacgaagggagta 187
|||||||||||||||||||| ||||||||
Sbjct: 29 aagacttatatttaggaacggagggagta 1
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 174 bits (88), Expect = 3e-43
Identities = 145/164 (88%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
||||||||||||||||||||||||||||||| ||| ||||| |||| | ||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 105
Query: 84 agcaaaatgaatgaatctacactctaaagtatgtctatatacatccgtatgtagtccact 143
|||||||||| |||||||| | |||||| |||||||||||||||||| |||||||| |||
Sbjct: 104 agcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctact 45
Query: 144 aatgaaatctttttgaagacttatatttaggaacgaagggagta 187
| ||||| || | |||||||||||||||||||| ||||||||
Sbjct: 44 agtgaaacctctaaaaagacttatatttaggaacggagggagta 1
Score = 73.8 bits (37), Expect = 9e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
||||||||||||||||||||||||||||||| ||| ||||||||| || |||||| |||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacattcgg 60
Query: 84 a 84
|
Sbjct: 61 a 61
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 159 aagacttatatttaggaacgaagggagtaga 189
|||||||||||||||||||| ||||||||||
Sbjct: 136 aagacttatatttaggaacggagggagtaga 166
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 151 bits (76), Expect = 5e-36
Identities = 139/164 (84%), Gaps = 17/164 (10%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92
Query: 84 agcaaaatgaatgaatctacactctaaagtatgtctatatacatccgtatgtagtccact 143
|||||||||| | ||||||||||||||||||||| |||||||||
Sbjct: 91 agcaaaatgagt-----------------tatgtctatatacatccgtatatagtccact 49
Query: 144 aatgaaatctttttgaagacttatatttaggaacgaagggagta 187
||||||| | ||| |||||||||||||||||||| ||||||||
Sbjct: 48 aatgaaacttctttaaagacttatatttaggaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaaga 58
|||||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgttcctaaatataagtctttaaaga 39
Score = 58.0 bits (29), Expect = 5e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 127 tccgtatgtagtccactaatgaaatctttttgaagacttatatttaggaacgaagggagt 186
||||||||||| | |||| |||||| | || |||||||||||||||||||| |||||||
Sbjct: 91 tccgtatgtagactactagtgaaatatcttaaaagacttatatttaggaacggagggagt 150
Query: 187 a 187
|
Sbjct: 151 a 151
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 151 bits (76), Expect = 5e-36
Identities = 143/164 (87%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
|||||||||||||||||||| |||||||||| ||| ||||| ||| | | ||||||| ||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgg 62
Query: 84 agcaaaatgaatgaatctacactctaaagtatgtctatatacatccgtatgtagtccact 143
|||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 63 agcaaaatgagtgaatctgtactct-aagtatgtctatatacatccgtatgtagtcccct 121
Query: 144 aatgaaatctttttgaagacttatatttaggaacgaagggagta 187
| ||||| | | |||||||||||||||||||| ||||||||
Sbjct: 122 agtgaaacttctaaaaagacttatatttaggaacggagggagta 165
Score = 81.8 bits (41), Expect = 4e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatacgg 106
Query: 84 a 84
|
Sbjct: 105 a 105
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 149 bits (75), Expect = 2e-35
Identities = 105/115 (91%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
||||||||||||||| ||||||||| | ||| || |||||||||||||| ||||||||||
Sbjct: 163 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 104
Query: 84 agcaaaatgaatgaatctacactctaaagtatgtctatatacatccgtatgtagt 138
|||||||||| |||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 103 agcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagt 49
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataag 48
|||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataag 25
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 145 bits (73), Expect = 3e-34
Identities = 144/165 (87%), Gaps = 2/165 (1%)
Strand = Plus / Plus
Query: 23 gtactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacg 82
|||||||||| ||||||||||||||||||||| ||| ||| | || | | |||||||||
Sbjct: 4 gtactccctctgttcctaaatataagtctttttagagattctaatatg-gactacatacg 62
Query: 83 gagcaaaatgaatgaatctacactctaaagtatgtctatatacatccgtatgtagtccac 142
||||||||||| ||||||||||||||||| || |||||||| |||||||||||||||||
Sbjct: 63 gagcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtcca- 121
Query: 143 taatgaaatctttttgaagacttatatttaggaacgaagggagta 187
|| | |||||| | |||||||||||||||||||| ||||||||
Sbjct: 122 tattcaaatctctaaaaagacttatatttaggaacggagggagta 166
Score = 63.9 bits (32), Expect = 8e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagatattt 63
||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagattt 127
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 133 bits (67), Expect = 1e-30
Identities = 103/115 (89%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
||||||||||||||| ||||||||| | ||| || ||||||||||| || ||||||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 84 agcaaaatgaatgaatctacactctaaagtatgtctatatacatccgtatgtagt 138
|||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagt 52
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataag 48
|||||||||||||||||||||||||
Sbjct: 4 tactccctccgttcctaaatataag 28
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 119 bits (60), Expect = 2e-26
Identities = 141/164 (85%), Gaps = 3/164 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
|||||||||||||||||||||||||||||| ||| ||||||||| || | ||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttggagagatttcacta-tagaccacatacgg 63
Query: 84 agcaaaatgaatgaatctacactctaaagtatgtctatatacatccgtatgtagtccact 143
|| ||||||| ||||||||||| |||| | ||||||||||||||||||| ||||||
Sbjct: 64 agaaaaatgagtgaatctacac-ataaaatgcatctatatacatccgtatgtggtccac- 121
Query: 144 aatgaaatctttttgaagacttatatttaggaacgaagggagta 187
| |||||| | | ||||||||||||||||||||| ||||||||
Sbjct: 122 agtgaaatatctacgaagacttatatttaggaacggagggagta 165
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatataagtcttttaagatatttcact 67
|||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 166 gtactccctccgttcctaaatataagtcttcgtagatatttcact 122
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 159 aagacttatatttaggaacgaagggagtag 188
|||||||||||||||||||| |||||||||
Sbjct: 33 aagacttatatttaggaacggagggagtag 4
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
|||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatacgg 64
Query: 84 agcaaaat 91
||||||||
Sbjct: 65 agcaaaat 72
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttt 53
||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataagtcttt 109
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 126 atccgtatgtagtccactaatgaaatctttttgaagacttatatttaggaacgaagggag 185
||||||||||||||| || | ||||||| |||||||||||||||||||| ||||||
Sbjct: 77 atccgtatgtagtccgttagttgaatctttcgaaagacttatatttaggaacggagggag 136
Query: 186 ta 187
||
Sbjct: 137 ta 138
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 101 bits (51), Expect = 4e-21
Identities = 82/91 (90%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 21 atgtactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacata 80
||||||||||||||||||||||||||||||| | ||| ||||||||| | | |||||||
Sbjct: 164 atgtactccctccgttcctaaatataagtctctgtagagatttcactatg-gactacata 106
Query: 81 cggagcaaaatgaatgaatctacactctaaa 111
|| |||||||||| |||||||||||||||||
Sbjct: 105 cgaagcaaaatgagtgaatctacactctaaa 75
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttt 53
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 160 agacttatatttaggaacgaagggagta 187
||||||||||||||||||| ||||||||
Sbjct: 134 agacttatatttaggaacggagggagta 161
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 95.6 bits (48), Expect = 2e-19
Identities = 137/164 (83%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
|||||||||||||||||||||||||||||| | | |||||| || | | | ||||||||
Sbjct: 2 tactccctccgttcctaaatataagtctttggacagatttcattatg-gaccacatacgg 60
Query: 84 agcaaaatgaatgaatctacactctaaagtatgtctatatacatccgtatgtagtccact 143
|| ||||||| |||| ||| |||||||| | |||| |||||||||||||| ||||| |
Sbjct: 61 agtaaaatgagtgaacctatactctaaaatgcatctacatacatccgtatgtggtcca-t 119
Query: 144 aatgaaatctttttgaagacttatatttaggaacgaagggagta 187
| |||||||| | |||||||||||||||||| | ||||||||
Sbjct: 120 agtgaaatctctacaaagacttatatttaggaatggagggagta 163
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 22 tgtactccctccgttcctaaatataagtcttttaagatatttcacta 68
|||||||||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 165 tgtactccctccattcctaaatataagtctttgtagagatttcacta 119
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 127 tccgtatgtagtccactaatgaaatctttttgaagacttatatttaggaacgaagggagt 186
||||||||| ||||| ||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 61 tccgtatgtggtcca-taatgaaatctgtccaaagacttatatttaggaacggagggagt 3
Query: 187 a 187
|
Sbjct: 2 a 2
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 93.7 bits (47), Expect = 9e-19
Identities = 99/115 (86%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
||||||||||||||||||||||||| | ||| | | ||||||||| || ||||||||||
Sbjct: 163 tactccctccgttcctaaatataagaccttttacaaatttcactat-agactacatacgg 105
Query: 84 agcaaaatgaatgaatctacactctaaagtatgtctatatacatccgtatgtagt 138
|||||||||| ||||| |||| | ||| |||| ||| |||||||||||||||||
Sbjct: 104 agcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgtagt 50
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataag 48
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatataag 26
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 163 cttatatttaggaacgaagggagtag 188
|||||||||||||||| |||||||||
Sbjct: 139 cttatatttaggaacggagggagtag 164
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 91.7 bits (46), Expect = 4e-18
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
||||||||||||||||||||||||||||||| ||| ||| ||||| | | ||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacactatg-gactacatacgg 63
Query: 84 agcaaaatgaatgaatct 101
|||||||||| |||||||
Sbjct: 64 agcaaaatgagtgaatct 81
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 21 atgtactccctccgttcctaaatataagtc 50
|||||| |||||||||||||||||||||||
Sbjct: 118 atgtaccccctccgttcctaaatataagtc 89
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 159 aagacttatatttaggaacgaagggagta 187
|||||||||||||||||||| ||||||||
Sbjct: 33 aagacttatatttaggaacggagggagta 5
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 85.7 bits (43), Expect = 2e-16
Identities = 98/115 (85%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
||||||||||||||||||||||||| | ||| ||| ||| |||| | | ||||||||||
Sbjct: 5 tactccctccgttcctaaatataagaccttttagaaattctactatg-gactacatacgg 63
Query: 84 agcaaaatgaatgaatctacactctaaagtatgtctatatacatccgtatgtagt 138
| ||||| ||| || ||| || ||||| ||||||||||||||||||||||||||
Sbjct: 64 aacaaaacaaataaacctataccctaaaatatgtctatatacatccgtatgtagt 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataag 48
|||||||||||||||||||||||||
Sbjct: 166 tactccctccgttcctaaatataag 142
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 163 cttatatttaggaacgaagggagtag 188
|||||||||||||||| |||||||||
Sbjct: 29 cttatatttaggaacggagggagtag 4
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 56.0 bits (28), Expect = 2e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagatatttcactaggagtctacatacgg 83
|||||||||| ||||||||||||||||||| | | ||||||||| | | |||||||||
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttcactacg-gactacatacga 63
Query: 84 agcaaaatgaatgaat 99
|| ||||||||||||
Sbjct: 64 agtgaaatgaatgaat 79
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 129 cgtatgtagtccactaatgaaatctttttgaagacttatatttaggaacgaagggagta 187
|||||||||||| || |||||||||| |||||||||||||||||| | ||||||||
Sbjct: 62 cgtatgtagtccg-tagtgaaatctttagaaagacttatatttaggaaaggagggagta 5
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||||||||||||||||
Sbjct: 77 gtactccctccgttcctaaatataag 52
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 22 tgtactccctccgttcctaaatata 46
|||||||||||||||||||||||||
Sbjct: 91 tgtactccctccgttcctaaatata 67
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataag 48
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataag 48
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 163 cttatatttaggaacgaagggagtag 188
|||||||||||||||| |||||||||
Sbjct: 29 cttatatttaggaacggagggagtag 4
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 21 atgtactccctccgttcctaaata 44
||||||||||||||||||||||||
Sbjct: 103 atgtactccctccgttcctaaata 80
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataa 47
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgtactccctccgttcctaaatataagt 49
|||||||||||||| |||||||||||||
Sbjct: 132 tgtactccctccgtccctaaatataagt 105
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 actccctccgttcctaaatataag 48
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatat 45
|||||||||||||||||||||||
Sbjct: 249 gtactccctccgttcctaaatat 227
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatat 45
|||||||||||||||||||||||
Sbjct: 241 gtactccctccgttcctaaatat 219
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 gtactccctccgttcctaaatat 45
|||||||||||||||||||||||
Sbjct: 1 gtactccctccgttcctaaatat 23
>RF00906;MIR1122;AAAA02031042.1/16213-16344 39946:Oryza sativa
Indica Group
Length = 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 atgtactccctccgttcctaaatataa 47
||||||||||||||| |||||||||||
Sbjct: 2 atgtactccctccgtccctaaatataa 28
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatata 46
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 20 aatgtactccctccgttcctaaatataagtctttt 54
|||||||||||||||| || |||||||||| ||||
Sbjct: 112 aatgtactccctccgtcccaaaatataagtatttt 78
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagt 49
||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgttccaaaatataagt 30
>RF00906;MIR1122;ABXC01006544.1/387099-387256 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 21 atgtactccctccgttcctaaatataagtc 50
|||||||||||||||||| || ||||||||
Sbjct: 157 atgtactccctccgttccaaattataagtc 128
>RF00906;MIR1122;EU730901.1/155966-155873 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 gtactccctccgttcctaaata 44
||||||||||||||||||||||
Sbjct: 4 gtactccctccgttcctaaata 25
>RF00906;MIR1122;AACV01023423.1/18495-18379 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 tgtactccctccgttcctaaatataa 47
|||||||||||||| |||||||||||
Sbjct: 115 tgtactccctccgtccctaaatataa 90
>RF00906;MIR1122;AP008217.1/6469174-6469304 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||| ||||||||||||
Sbjct: 128 gtactccctccgtccctaaatataag 103
>RF00906;MIR1122;AACV01000871.1/13756-13601 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||| ||||||||||||
Sbjct: 153 gtactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02001165.1/17166-17008 39946:Oryza sativa
Indica Group
Length = 159
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||| ||||||||||||
Sbjct: 156 gtactccctccgtccctaaatataag 131
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagt 49
||||| ||||||||||||||||||||
Sbjct: 146 tactcactccgttcctaaatataagt 121
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||| ||||||||||||
Sbjct: 128 gtactccctccgtccctaaatataag 103
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP008207.1/11769320-11769475 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgtccctaaatataag 29
