miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 163 bits (82), Expect = 9e-40
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagtctttaaagaggtatcattagtggactacatacgg 65
|||||||||||||||||||||||||||||| |||| | ||| || ||||||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacgg 105
Query: 66 atgtatatagacatactatagagtggagattcattcattttgcttcatatgtagattcct 125
||||||||||||||||| ||||||| | ||||| |||||||||| | |||||||| ||
Sbjct: 104 atgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatct 45
Query: 126 agtaaaatatcttaaaagacttatatttaggaac 159
||| |||| ||||||||||||||||||||||||
Sbjct: 44 agtgaaatcgcttaaaagacttatatttaggaac 11
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagtcttt 35
||||||||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttt 30
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 139 bits (70), Expect = 1e-32
Identities = 134/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagtctttaaagaggtatcattagtggactacatacgg 65
|||||||||||||||||||||||||||||| ||| || ||| ||| |||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatacgg 106
Query: 66 atgtatatagacatactatagagtggagattcattcattttgcttcatatgtagattcct 125
||||||||||||||||| |||||| ||||||| |||||||||| ||||||||| | |
Sbjct: 105 atgtatatagacatact-tagagtacagattcactcattttgctccatatgtagcccctt 47
Query: 126 agtaaaatatcttaaaagacttatatttaggaac 159
|| |||| ||| |||||||||| ||||||||||
Sbjct: 46 agagaaatctctaaaaagacttacatttaggaac 13
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataagtcttt 35
||||||||||||||||||||| |||||||||
Sbjct: 2 atactccctccgttcctaaatgtaagtcttt 32
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagtctttaaagaggtatcattagtggactacatacgg 65
|||||||||||||||||||||||||||||| |||||| ||| |||| |||||||| |||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacattcgg 60
Query: 66 atgtatatagacatactatagagtggagattcattcattttgcttcatatgtagattcct 125
||||||||||||||| | |||| | ||||||| |||||||||| | ||||||| ||
Sbjct: 61 atgtatatagacatattttagaatatagattcactcattttgctccgtatgtagtcgtct 120
Query: 126 agtaaaatatcttaaaagacttatatttaggaac 159
|| |||| ||| |||||||||||||||||||||
Sbjct: 121 agcgaaatctctaaaaagacttatatttaggaac 154
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagtcttt 35
||||||||||||||||||||||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtcttt 135
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 127 bits (64), Expect = 5e-29
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataagtctttaaagaggtatcattagtggactacatacg 64
|||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 4 atactccctccgttcctaaatataagtctttaaagaagtttcattagtggactatatacg 63
Query: 65 gatgtatatagacata 80
||||||||||||||||
Sbjct: 64 gatgtatatagacata 79
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataagtctttaaagaggtatcattagtggactacatacg 64
||||||||||||||||||||||||||||||| |||| | ||| |||| | |||||||||
Sbjct: 152 atactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacg 93
Query: 65 ga 66
||
Sbjct: 92 ga 91
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 117 bits (59), Expect = 5e-26
Identities = 133/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataagtctttaaagaggtatcattagtggactacatacg 64
||||||||||||||||||||||||||||||| |||| | | | || |||||||||||||
Sbjct: 167 atactccctccgttcctaaatataagtctttttagagatttgaata-tggactacatacg 109
Query: 65 gatgtatatagacatactatagagtggagattcattcattttgcttcatatgtagattcc 124
|||| |||||||| || | ||||||| ||||||| |||||||||| | ||||||| | |
Sbjct: 108 gatgaatatagacgtattttagagtgtagattcactcattttgctccgtatgtag-tcca 50
Query: 125 tagtaaaatatcttaaaagacttatatttaggaac 159
|| || ||| ||| |||||||||||||||||||||
Sbjct: 49 tattagaatctctaaaaagacttatatttaggaac 15
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagtcttt 35
||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctctgttcctaaatataagtcttt 34
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 130 aaatatcttaaaagacttatatttaggaac 159
|||| ||| |||||||||||||||||||||
Sbjct: 127 aaatctctaaaaagacttatatttaggaac 156
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 81.8 bits (41), Expect = 3e-15
Identities = 89/105 (84%)
Strand = Plus / Plus
Query: 55 actacatacggatgtatatagacatactatagagtggagattcattcattttgcttcata 114
|||||||||||||||| ||||||||| | |||||| ||||||| |||||||||| | ||
Sbjct: 49 actacatacggatgtacatagacatattttagagtatagattcactcattttgctccgta 108
Query: 115 tgtagattcctagtaaaatatcttaaaagacttatatttaggaac 159
||||| ||||||| ||||| || ||| | ||||||||| |||||
Sbjct: 109 tgtagtctcctagtgaaatacctaaaaggtcttatattttggaac 153
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
|||||||||||||||| |||||||||
Sbjct: 164 atactccctccgttccaaaatataag 139
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 65.9 bits (33), Expect = 2e-10
Identities = 87/105 (82%)
Strand = Plus / Plus
Query: 55 actacatacggatgtatatagacatactatagagtggagattcattcattttgcttcata 114
|||||||||||||||| ||||||||| | |||||| |||||| |||||||||| | ||
Sbjct: 52 actacatacggatgtacatagacatattttagagtatagattcgctcattttgctccgta 111
Query: 115 tgtagattcctagtaaaatatcttaaaagacttatatttaggaac 159
||||| | ||||| ||||| || ||| | ||||||||| |||||
Sbjct: 112 tgtagtcttctagtgaaatacctaaaaggtcttatattttggaac 156
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 102 attttgcttcatatgtagattcctagtaaaatatcttaaaagacttatattta 154
|||||||| | |||||||| |||||| |||||||||||||||||||||||||
Sbjct: 72 attttgctccgtatgtagacacctagtgaaatatcttaaaagacttatattta 20
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataagtcttt 35
|||||||||||||||||||||||||||||||
Sbjct: 139 atactccctccgttcctaaatataagtcttt 109
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataagtctttaaaga 40
||||||||||||| | ||||||||||||||| ||||
Sbjct: 4 atactccctccgtacttaaatataagtcttttaaga 39
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum
(bread wheat)
Length = 167
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataagtcttt 35
|||||||||||||||||||||||||||||||
Sbjct: 1 atactccctccgttcctaaatataagtcttt 31
Score = 61.9 bits (31), Expect = 2e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagtctttaaagaggtatcattagtggactacatacgg 65
|||||||||| ||||||||||||||||||| |||| | ||| || ||||| ||||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcacta-tggaccacatacgg 105
Query: 66 atgtatataga 76
|||||| ||||
Sbjct: 104 atgtatgtaga 94
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 61.9 bits (31), Expect = 2e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagtctttaaagaggtatcattagtggactacatacgg 65
||||||||||||||||||||||||||||| ||| | ||| | |||||| ||||||||
Sbjct: 165 tactccctccgttcctaaatataagtcttcgtagatatttcact-gtggaccacatacgg 107
Query: 66 atgtatataga 76
|||||||||||
Sbjct: 106 atgtatataga 96
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagtcttt 35
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataagtcttt 35
|||||||||||||||||||||||||||||||
Sbjct: 4 atactccctccgttcctaaatataagtcttt 34
Score = 50.1 bits (25), Expect = 9e-06
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 91 gagattcattcattttgcttcatatgtagattcctagtaaaatatcttaaaagacttata 150
|||||||| |||||||||| | ||||||| | | |||| ||| ||| ||||||||||||
Sbjct: 82 gagattcactcattttgctccgtatgtag-tccatagtgtaatctctaaaaagacttata 24
Query: 151 tttaggaac 159
|||||||||
Sbjct: 23 tttaggaac 15
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 ccctccgttcctaaatataagtc 32
|||||||||||||||||||||||
Sbjct: 111 ccctccgttcctaaatataagtc 89
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagtcttt 35
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagtct 33
||||||||||||||||||||||||||||
Sbjct: 161 tactccctccgttcctaaatataagtct 134
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataagtcttt 35
||||||||||| |||||||||||||||||||
Sbjct: 4 atactccctcctttcctaaatataagtcttt 34
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 55 actacatacggatgtatatagacata 80
||||||||||||||||||||||||||
Sbjct: 118 actacatacggatgtatatagacata 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||||||||||||||||
Sbjct: 167 atactccctccgttcctaaatataag 142
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||||||||||||||||
Sbjct: 4 atactccctccgttcctaaatataag 29
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatataag 26
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 163 tactccctccgttcctaaatataag 139
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataa 29
|||||||||||||||||||||||||
Sbjct: 116 atactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 catactccctccgttcctaaatataag 30
||||||||||| |||||||||||||||
Sbjct: 3 catactccctctgttcctaaatataag 29
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatata 28
||||||||||||||||||||||||
Sbjct: 4 atactccctccgttcctaaatata 27
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 actccctccgttcctaaatataag 30
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF00906;MIR1122;AACV01007572.1/20450-20296 39947:Oryza sativa
Japonica Group
Length = 155
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3 acatactccctccgttcctaaatataag 30
||||||||||||||| ||||||||||||
Sbjct: 154 acatactccctccgtccctaaatataag 127
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatat 27
|||||||||||||||||||||||
Sbjct: 239 atactccctccgttcctaaatat 217
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatat 27
|||||||||||||||||||||||
Sbjct: 1 atactccctccgttcctaaatat 23
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatata 28
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataagt 31
|||||| ||||||||||||||||||||
Sbjct: 147 atactcactccgttcctaaatataagt 121
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 catactccctccgttcctaaatataag 30
||||||||||||||||| |||||||||
Sbjct: 93 catactccctccgttccaaaatataag 67
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
|||||||||||||||| |||||||||
Sbjct: 119 atactccctccgttccaaaatataag 94
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
|||||||||||||||| |||||||||
Sbjct: 154 atactccctccgttccaaaatataag 129
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagt 31
||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgttccaaaatataagt 30
>RF00906;MIR1122;CT030168.3/87017-87173 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataag 30
|||||||||||||| |||||||||||
Sbjct: 4 atactccctccgtttctaaatataag 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
|||||||||||||| |||||||||||
Sbjct: 154 atactccctccgtttctaaatataag 129
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
|||||||||||||||| |||||||||
Sbjct: 152 atactccctccgttccaaaatataag 127
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaata 26
||||||||||||||||||||||
Sbjct: 91 atactccctccgttcctaaata 70
>RF00906;MIR1122;AACV01003381.1/5259-5104 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02005173.1/305-150 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 153 atactccctccgtccctaaatataag 128
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
Indica Group
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 138 atactccctccgtccctaaatataag 113
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 128 atactccctccgtccctaaatataag 103
>RF00906;MIR1122;AP005896.3/119867-120022 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01013612.1/22689-22534 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 153 atactccctccgtccctaaatataag 128
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagt 31
|||||||||||| |||||||||||||
Sbjct: 130 tactccctccgtccctaaatataagt 105
>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 137 atactccctccgtccctaaatataag 112
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 118 atactccctccgtccctaaatataag 93
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 128 atactccctccgtccctaaatataag 103
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AC087851.4/84630-84468 4530:Oryza sativa (rice)
Length = 163
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 160 atactccctccgtccctaaatataag 135
