miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 208 bits (105), Expect = 2e-53
Identities = 148/161 (91%), Gaps = 1/161 (0%)
Strand = Plus / Minus
Query: 15 ctactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatacg 74
||||||||||||||||||||||||||||||| || || |||||||||| || ||||||||
Sbjct: 165 ctactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacg 106
Query: 75 gatgtatatagacatactctagagtgtacattcaatcattttgcttcgtatctaaacct- 133
|||||||||||||||||| |||||||||||||||||||||||||| ||||| || || |
Sbjct: 105 gatgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatc 46
Query: 134 tagtgaaatcgtttaacagacttatatttaggaacggaggg 174
||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 45 tagtgaaatcgcttaaaagacttatatttaggaacggaggg 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttt 46
|||||||||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtctttt 31
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 151 agacttatatttaggaacggaggg 174
||||||||||||||||||||||||
Sbjct: 137 agacttatatttaggaacggaggg 160
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 143 bits (72), Expect = 1e-33
Identities = 139/160 (86%), Gaps = 1/160 (0%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatacgg 75
||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacattcgg 60
Query: 76 atgtatatagacatactctagagtgtacattcaatcattttgcttcgtatctaaacct-t 134
||||||||||||||| | |||| | || ||||| |||||||||| ||||| || | | |
Sbjct: 61 atgtatatagacatattttagaatatagattcactcattttgctccgtatgtagtcgtct 120
Query: 135 agtgaaatcgtttaacagacttatatttaggaacggaggg 174
|| |||||| | || ||||||||||||||||||||||||
Sbjct: 121 agcgaaatctctaaaaagacttatatttaggaacggaggg 160
Score = 67.9 bits (34), Expect = 5e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 15 ctactccctccgttcctaaatataagtcttttta 48
||||||||||||||||||||||||||||||||||
Sbjct: 165 ctactccctccgttcctaaatataagtcttttta 132
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 151 agacttatatttaggaacggaggg 174
||||||||||||||||||||||||
Sbjct: 28 agacttatatttaggaacggaggg 5
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 119 bits (60), Expect = 1e-26
Identities = 137/160 (85%), Gaps = 2/160 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatacgg 75
||||||||||||||||||||||||||||||||| | ||||||||| || |||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatacgg 106
Query: 76 atgtatatagacatactctagagtgtacattcaatcattttgcttcgtatcta-aacctt 134
||||||||||||||||| |||||| | ||||| |||||||||| | ||| || ||||
Sbjct: 105 atgtatatagacatact-tagagtacagattcactcattttgctccatatgtagcccctt 47
Query: 135 agtgaaatcgtttaacagacttatatttaggaacggaggg 174
|| |||||| | || ||||||| ||||||||||||||||
Sbjct: 46 agagaaatctctaaaaagacttacatttaggaacggaggg 7
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttaaaggtttcactaa 61
|||||||||||||||||||| |||||||||||| || |||| ||||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaa 48
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 151 agacttatatttaggaacggaggg 174
||||||||||||||||||||||||
Sbjct: 138 agacttatatttaggaacggaggg 161
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 103 bits (52), Expect = 9e-22
Identities = 137/164 (83%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatacgg 75
||||||||||||||||||||||||||||||||| || ||| | | || || |||||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagatttgaat-atggactacatacgg 108
Query: 76 atgtatatagacatactctagagtgtacattcaatcattttgcttcgtatctaaacctta 135
||| |||||||| || | ||||||||| ||||| |||||||||| ||||| || || ||
Sbjct: 107 atgaatatagacgtattttagagtgtagattcactcattttgctccgtatgtagtccata 48
Query: 136 gtgaaatcgtttaacagacttatatttaggaacggagggcgtac 179
| |||| | || |||||||||||||||||| ||||| ||||
Sbjct: 47 ttagaatctctaaaaagacttatatttaggaacagagggagtac 4
Score = 58.0 bits (29), Expect = 5e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtcttttta 48
||||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctctgttcctaaatataagtcttttta 37
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 151 agacttatatttaggaacggaggg 174
||||||||||||||||||||||||
Sbjct: 139 agacttatatttaggaacggaggg 162
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 83.8 bits (42), Expect = 8e-16
Identities = 94/110 (85%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatacgg 75
||||||||||||||||||||||||| | ||||| || || |||| || | |||||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagattgtacta-taaactacatacgg 59
Query: 76 atgtatatagacatactctagagtgtacattcaatcattttgcttcgtat 125
||||| ||||||||| | |||||| || ||||| |||||||||| |||||
Sbjct: 60 atgtacatagacatattttagagtatagattcactcattttgctccgtat 109
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 83.8 bits (42), Expect = 8e-16
Identities = 136/166 (81%), Gaps = 6/166 (3%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatacgg 75
|||||||||||||||||||||||||||||| || || || ||||| | || |||||
Sbjct: 5 tactccctccgttcctaaatataagtctttgtagagattccacta-tggaccacata--- 60
Query: 76 atgtatatagacatactctagagtgtacattcaatcattttgcttcgtatctaaacctta 135
||||||||| | | ||||||||| ||||| |||||||||||||||| || || ||
Sbjct: 61 --gtatatagatgcattttagagtgtagattcactcattttgcttcgtatgtagtccata 118
Query: 136 gtgaaatcgtttaacagacttatatttaggaacggagggcgtacat 181
|||||||| | | |||||||||||||||||||||||| ||||||
Sbjct: 119 gtgaaatctctacagagacttatatttaggaacggagggagtacat 164
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttaaaggtttcacta 60
|||||||||||||||||||||||||||| | || || ||||||||
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcacta 117
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 151 agacttatatttaggaacggaggg 174
||||||||||||||||||||||||
Sbjct: 32 agacttatatttaggaacggaggg 9
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 79.8 bits (40), Expect = 1e-14
Identities = 95/112 (84%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 14 actactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatac 73
||||||||||||||||||||||||||| | ||||| || || ||| ||| | |||||||
Sbjct: 2 actactccctccgttcctaaatataagaccttttagagattgtact-ataaactacatac 60
Query: 74 ggatgtatatagacatactctagagtgtacattcaatcattttgcttcgtat 125
||||||| ||||||||| | |||||| || |||| |||||||||| |||||
Sbjct: 61 ggatgtacatagacatattttagagtatagattcgctcattttgctccgtat 112
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 77.8 bits (39), Expect = 5e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatacgg 75
|||||||||||||||||||||||||||||| | | |||||| || | || || ||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttaaagaagtttcattagtggactatatacgg 64
Query: 76 atgtatatagacata 90
|||||||||||||||
Sbjct: 65 atgtatatagacata 79
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatacgg 75
||||||||||||||||||||||||||||||| | | |||||||| ||| |||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92
Query: 76 a 76
|
Sbjct: 91 a 91
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 146 ttaacagacttatatttaggaacggaggg 174
|||| ||||||||||||||||||||||||
Sbjct: 119 ttaaaagacttatatttaggaacggaggg 147
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 151 agacttatatttaggaacggaggg 174
||||||||||||||||||||||||
Sbjct: 32 agacttatatttaggaacggaggg 9
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 71.9 bits (36), Expect = 3e-12
Identities = 130/160 (81%), Gaps = 1/160 (0%)
Strand = Plus / Plus
Query: 15 ctactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatacg 74
|||||||||||||||||||||||||| | ||||| || | ||||| ||| | ||||||||
Sbjct: 1 ctactccctccgttcctaaatataagaccttttagagatctcact-ataaactacatacg 59
Query: 75 gatgtatatagacatactctagagtgtacattcaatcattttgcttcgtatctaaacctt 134
||||||| ||| |||| | | | |||| ||||| |||||||||| ||||| || | |
Sbjct: 60 gatgtatgtagtcatattttgggatgtaaattcactcattttgctccgtatgtagtctat 119
Query: 135 agtgaaatcgtttaacagacttatatttaggaacggaggg 174
|||||||| | || | |||||||||||||||||||||
Sbjct: 120 agtgaaatttgtaaaaggtcttatatttaggaacggaggg 159
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 14 actactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatac 73
||||||||||||||||||||||||||| | ||||| | ||||||| ||||| |||||||
Sbjct: 165 actactccctccgttcctaaatataagaccttttacaaatttcact-atagactacatac 107
Query: 74 gga 76
|||
Sbjct: 106 gga 104
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtcttttta 48
|||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttttta 37
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 104 attcaatcattttgcttcgtatctaaaccttagtgaaatcgtttaacagacttatattta 163
||||| |||||||||| ||||| || || ||||| |||| | || |||||||||||||
Sbjct: 79 attcactcattttgctccgtatgtagtccatagtgtaatctctaaaaagacttatattta 20
Query: 164 ggaacggaggg 174
|||||||||||
Sbjct: 19 ggaacggaggg 9
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 152 gacttatatttaggaacggagggcgtacat 181
||||||||||||||||||||||| ||||||
Sbjct: 89 gacttatatttaggaacggagggggtacat 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 20 ccctccgttcctaaatataagtcttttta 48
||||||||||||||||||||||| |||||
Sbjct: 111 ccctccgttcctaaatataagtcctttta 83
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttaaaggtttcacta 60
|||||||||| ||||||||||||||||||| ||||| ||||||||
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttcacta 49
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 104 attcaatcattttgcttcgtatctaaaccttagtgaaatcgtttaacagacttatattta 163
||||| |||||| |||||||| || || |||||||||| || | |||||||||||||
Sbjct: 79 attcattcatttcacttcgtatgtagtccgtagtgaaatctttagaaagacttatattta 20
Query: 164 ggaacggaggg 174
|||| ||||||
Sbjct: 19 ggaaaggaggg 9
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 13 gactactccctccgttcctaaatataa 39
||||||||||||||||||||| |||||
Sbjct: 106 gactactccctccgttcctaagtataa 80
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 63.9 bits (32), Expect = 8e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 14 actactccctccgttcctaaatataagtcttt 45
||||||||||||||||||||||||||||||||
Sbjct: 3 actactccctccgttcctaaatataagtcttt 34
Score = 58.0 bits (29), Expect = 5e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctt 44
|||||||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctt 137
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 151 agacttatatttaggaacggagggcgtac 179
|||||||||||||||||||||||| ||||
Sbjct: 138 agacttatatttaggaacggagggagtac 166
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 151 agacttatatttaggaacggaggg 174
||||||||||||||||||||||||
Sbjct: 32 agacttatatttaggaacggaggg 9
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatacgg 75
|||||||||| ||||||||||||||||||| || || ||||||| || || ||||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcact-atggaccacatacgg 105
Query: 76 atgtatataga 86
|||||| ||||
Sbjct: 104 atgtatgtaga 94
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtcttt 45
||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatataagtcttt 31
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 151 agacttatatttaggaacggagggcgtaca 180
||||||||||||||||| |||||| |||||
Sbjct: 136 agacttatatttaggaatggagggagtaca 165
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtcttt 45
||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataagtcttt 109
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 151 agacttatatttaggaacggaggg 174
||||||||||||||||||||||||
Sbjct: 111 agacttatatttaggaacggaggg 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttt 46
|||||||||||| | ||||||||||||||||
Sbjct: 5 tactccctccgtacttaaatataagtctttt 35
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 actactccctccgttcctaaatataag 40
|||||||||||||||||||||||||||
Sbjct: 3 actactccctccgttcctaaatataag 29
Score = 54.0 bits (27), Expect = 7e-07
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttaaaggtttcactaatagagtacatacgg 75
||||||||||||||||||||||||| | ||||| || |||| || | |||||||||
Sbjct: 166 tactccctccgttcctaaatataagaccttttaggtattacact-atgaactacatacgg 108
Query: 76 atgtatatagacata 90
|||||||||||||||
Sbjct: 107 atgtatatagacata 93
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 ctactccctccgttcctaaatataag 40
||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataag 29
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 154 cttatatttaggaacggagggcgtac 179
||||||||||||||||||||| ||||
Sbjct: 52 cttatatttaggaacggagggagtac 77
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 actactccctccgttcctaaatataagt 41
||||||||||||||||| ||||||||||
Sbjct: 3 actactccctccgttccaaaatataagt 30
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataa 39
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 actccctccgttcctaaatataag 40
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatata 38
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa Japonica
Group
Length = 110
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 14 actactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 108 actactccctccgtccctaaatataag 82
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 14 actactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 154 actactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02028211.1/1243-1359 39946:Oryza sativa
Indica Group
Length = 117
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 actactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 3 actactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01023423.1/18495-18379 39947:Oryza sativa
Japonica Group
Length = 117
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 actactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 3 actactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 actactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 3 actactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa
Japonica Group
Length = 121
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 actactccctccgttcctaaatataag 40
|||||| ||||||||||||||||||||
Sbjct: 3 actacttcctccgttcctaaatataag 29
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 actactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 3 actactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatata 38
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AC078977.6/20616-20377 39947:Oryza sativa Japonica
Group
Length = 240
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 157 atatttaggaacggagggcgta 178
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggcgta 2
>RF00906;MIR1122;EU730896.1/84586-84679 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 ctactccctccgttcctaaata 36
||||||||||||||||||||||
Sbjct: 91 ctactccctccgttcctaaata 70
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 ctactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 112 ctactccctccgtccctaaatataag 87
>RF00906;MIR1122;AACV01007836.1/7963-7867 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 ctactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 94 ctactccctccgtccctaaatataag 69
>RF00906;MIR1122;AC136448.2/118247-118097 39947:Oryza sativa
Japonica Group
Length = 151
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AC120985.3/48011-47950 39947:Oryza sativa
Japonica Group
Length = 62
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 ctactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 59 ctactccctccgtccctaaatataag 34
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagt 41
|||||||||||| |||||||||||||
Sbjct: 130 tactccctccgtccctaaatataagt 105
>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02019543.1/35421-35577 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 ctactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 154 ctactccctccgtccctaaatataag 129
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagt 41
||||| ||||||||||||||||||||
Sbjct: 146 tactcactccgttcctaaatataagt 121
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 ctactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 154 ctactccctccgtccctaaatataag 129
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa Japonica
Group
Length = 132
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 ctactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 129 ctactccctccgtccctaaatataag 104
