miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 167 bits (84), Expect = 6e-41
Identities = 145/164 (88%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagactttttaaagattacactatggattagatacgga 65
||||||||||||||||||||||||||| ||||| | ||| |||||| || || |||||||
Sbjct: 163 tactccctccgttcctaaatataagaccttttacaaatttcactatagactacatacgga 104
Query: 66 gcaaaataagtgaatctacatcctaaaatatgaatacatacatctgtatgtagtttataa 125
||||||| ||||||| ||||||| ||||||||| |||||||||| ||||||||||||||
Sbjct: 103 gcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgtagtttatag 44
Query: 126 tggaatttttaaaaggtattatatttaggaatcggagggagtag 169
|| || | |||||||| ||||||||||||| ||||||||||||
Sbjct: 43 tgagatctctaaaaggtcttatatttaggaa-cggagggagtag 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 111 gtatgtagtttataatggaatttttaaaaggtattatatttaggaatcggagggagtagt 170
||||||||| |||| || ||||| |||||||| ||||||||||||| |||||||||||||
Sbjct: 107 gtatgtagtctatagtgaaatttgtaaaaggtcttatatttaggaa-cggagggagtagt 165
Query: 171 a 171
|
Sbjct: 166 a 166
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagactttttaaagat 43
||||||||||||||||||||||||||| ||||| ||||
Sbjct: 2 tactccctccgttcctaaatataagaccttttagagat 39
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 119 bits (60), Expect = 1e-26
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 3 ttatactccctccgttcctaaatataagactttttaaagattacactatggattagatac 62
|||||||||||||||||||||||||||| ||||||| ||||||||||||||| || ||||
Sbjct: 2 ttatactccctccgttcctaaatataagtctttttagagattacactatggactacatac 61
Query: 63 ggagcaaaataagtgaatct 82
|||||||||| |||||||||
Sbjct: 62 ggagcaaaatgagtgaatct 81
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 10 ccctccgttcctaaatataagactttttaaagatt 44
||||||||||||||||||||| | ||||| |||||
Sbjct: 111 ccctccgttcctaaatataagtccttttagagatt 77
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 109 bits (55), Expect = 1e-23
Identities = 137/163 (84%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagactttttaaagattacactatggattagatacgga 65
||||||||||||||||||||||||||| ||||| | ||| |||||||| || |||||||
Sbjct: 5 tactccctccgttcctaaatataagaccttttagaaattctactatggactacatacgga 64
Query: 66 gcaaaataagtgaatctacatcctaaaatatgaatacatacatctgtatgtagtttataa 125
||||| || | || ||| | ||||||||||| || ||||||| |||||||||| |||
Sbjct: 65 acaaaacaaataaacctataccctaaaatatgtctatatacatccgtatgtagttcatag 124
Query: 126 tggaatttttaaaaggtattatatttaggaatcggagggagta 168
|| ||| |||||||| ||||||||||||| |||||||||||
Sbjct: 125 tgtaatacctaaaaggtcttatatttaggaa-cggagggagta 166
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataagactttttaaagattacactatggattagatacgg 64
|||||||||||||||||||||||||||| ||||| ||||||||||| | || ||||||
Sbjct: 167 atactccctccgttcctaaatataagaccttttaggtattacactatgaactacatacgg 108
Query: 65 a 65
|
Sbjct: 107 a 107
Score = 56.0 bits (28), Expect = 2e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 111 gtatgtagtttataatggaatttttaaaaggtattatatttaggaatcggagggagtagt 170
||||||||| ||| | |||||| |||||||| ||||||||||||| |||||||||||||
Sbjct: 61 gtatgtagtccatagtagaatttctaaaaggtcttatatttaggaa-cggagggagtagt 3
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 107 bits (54), Expect = 5e-23
Identities = 140/166 (84%), Gaps = 2/166 (1%)
Strand = Plus / Minus
Query: 4 tatactccctccgttcctaaatataagactttttaaagattacactatg-gattagatac 62
||||||||||||||||| ||||||||||| ||||| ||| ||||| | || || ||||
Sbjct: 165 tatactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatac 106
Query: 63 ggagcaaaataagtgaatctacatcctaaaatatgaatacatacatctgtatgtagttta 122
|||||||||| |||||||||| | |||||||||| || |||||| ||||||||||||
Sbjct: 105 ggagcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagttta 46
Query: 123 taatggaatttttaaaaggtattatatttaggaatcggagggagta 168
|| | ||| | |||||||| ||||||||||||| |||||||||||
Sbjct: 45 tagtacaatctctaaaaggtcttatatttaggaa-cggagggagta 1
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagactttttaaagatt 44
||||||||||||||||||||||||||| ||||| |||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagatt 39
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 93.7 bits (47), Expect = 8e-19
Identities = 135/163 (82%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagactttttaaagattacactatggattagatacgga 65
||||||||| ||||||||||||||| ||||||| ||||| | |||||| || |||||||
Sbjct: 5 tactccctctgttcctaaatataagtctttttagagattctaatatggactacatacgga 64
Query: 66 gcaaaataagtgaatctacatcctaaaatatgaatacatacatctgtatgtagtttataa 125
||||||| |||||||||||| |||||||| | || || |||| ||||||||| |||
Sbjct: 65 gcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtccatat 124
Query: 126 tggaatttttaaaaggtattatatttaggaatcggagggagta 168
| ||| | ||||| | ||||||||||||| |||||||||||
Sbjct: 125 tcaaatctctaaaaagacttatatttaggaa-cggagggagta 166
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataagactttttaaagattacactatggattagatacgg 64
|||||||||||||||||||||||||| ||||||| ||||| | |||||| || ||||||
Sbjct: 167 atactccctccgttcctaaatataagtctttttagagatttgaatatggactacatacgg 108
Query: 65 a 65
|
Sbjct: 107 a 107
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 91.7 bits (46), Expect = 3e-18
Identities = 138/166 (83%), Gaps = 2/166 (1%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagactttttaaagattacactatg-gattagatacgg 64
||||||||||||||| ||||||||||| ||||| ||| ||||| || || ||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 65 agcaaaataagtgaatctacatcctaaaatatgaatacatacatctgtatgtagtttata 124
|||||||| || ||||||| | |||||||||| || |||||| ||||||||||||||
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagtttata 47
Query: 125 atggaatttttaaaaggtattatatttaggaatcggagggagtagt 170
| ||| | |||||||| ||||||||||||| |||||||||||||
Sbjct: 46 gtacaatctctaaaaggtcttatatttaggaa-cggagggagtagt 2
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagactttttaaagatt 44
||||||||||||||||||||||||||| ||||| |||||
Sbjct: 4 tactccctccgttcctaaatataagaccttttagagatt 42
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 89.7 bits (45), Expect = 1e-17
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagactttttaaagattacactatggattagatacgga 65
||||||||||||||||||||||||| || | || ||||| ||||||||| || ||||| |
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcactatggactacatacgaa 102
Query: 66 gcaaaataagtgaatctacatcctaaaat 94
||||||| |||||||||||| |||||||
Sbjct: 101 gcaaaatgagtgaatctacactctaaaat 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagactttttaaagattacactatgga 54
||||||||||||||||||||||||| |||| || ||||| |||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttgtagagattccactatgga 53
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 85.7 bits (43), Expect = 2e-16
Identities = 98/115 (85%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagactttttaaagattacacta-tggattagatacgg 64
||||||||||||||||||||||||| ||||||| ||||| | ||| || || ||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 105
Query: 65 agcaaaataagtgaatctacatcctaaaatatgaatacatacatctgtatgtagt 119
|||||||| |||||||||| || |||||||||| || ||||||| | |||||||
Sbjct: 104 agcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagt 50
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagacttttta 38
||||||||||||||||||||||||| |||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttta 33
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagactttttaaagattacactatggattagatacgga 65
||||||||||||||||||||||||| |||| | ||||| |||||| || | |||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttggagagatttcactatagaccacatacgga 64
Query: 66 gcaaaataagtgaatctaca 85
| ||||| ||||||||||||
Sbjct: 65 gaaaaatgagtgaatctaca 84
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataag 141
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum
(bread wheat)
Length = 167
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataagactttttaaagattacactatggattagatacgg 64
|||||||||||||||||||||||||| |||| | ||||| || |||||| | ||||||
Sbjct: 1 atactccctccgttcctaaatataagtctttggacagatttcattatggaccacatacgg 60
Query: 65 agcaaaataagtgaa 79
|| ||||| ||||||
Sbjct: 61 agtaaaatgagtgaa 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagactttttaaagattacactatgga 54
|||||||||| |||||||||||||| |||| || ||||| |||||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcactatgga 115
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataagactttttaaagattacactatggattagatacg 63
||||||||||| |||||||||||||| |||| |||||||| ||||| ||| || |||||
Sbjct: 4 atactccctcctttcctaaatataagtctttctaaagatttcactacggactacatacg 62
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 4 tatactccctccgttcctaaatataagactttt 36
||||||||||||||||||||||||||| |||||
Sbjct: 153 tatactccctccgttcctaaatataagtctttt 121
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 4 tatactccctccgttcctaaatataagacttt 35
||||||||||||||||||||||||||| ||||
Sbjct: 3 tatactccctccgttcctaaatataagtcttt 34
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagacttttta 38
||||||||||||||||||||||||| |||||||
Sbjct: 165 tactccctccgttcctaaatataagtcttttta 133
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataagactttttaaagatt 44
||||||||||||||||||||| |||| ||||||| |||||
Sbjct: 2 atactccctccgttcctaaatgtaagtctttttagagatt 41
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagactttttaaagattacacta 50
||||||||||||||||||||||||| |||| || ||||| |||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcacta 120
Score = 56.0 bits (28), Expect = 2e-07
Identities = 96/117 (82%), Gaps = 5/117 (4%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagactttttaaagattacactatggat---tagatac 62
||||||||||||||||||||||||| ||||| | |||| ||||| ||| || ||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcacta--gatgtctacatac 58
Query: 63 ggagcaaaataagtgaatctacatcctaaaatatgaatacatacatctgtatgtagt 119
|||||||||| | ||||| |||| ||||| |||| || ||||||| |||||||||
Sbjct: 59 ggagcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagt 115
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 4 tatactccctccgttcctaaatataagactttttaaagatt 44
||||||||||||||||||||||||||| |||| |||||||
Sbjct: 140 tatactccctccgttcctaaatataagtctttcgaaagatt 100
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 4 tatactccctccgttcctaaatataag 30
|||||||||||||||||||||||||||
Sbjct: 3 tatactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 4 tatactccctccgttcctaaatataa 29
||||||||||||||||||||||||||
Sbjct: 117 tatactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
||||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataaga 51
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataag 30
|||||||||| |||||||||||||||
Sbjct: 4 atactccctctgttcctaaatataag 29
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 4 tatactccctccgttcctaaatata 28
|||||||||||||||||||||||||
Sbjct: 3 tatactccctccgttcctaaatata 27
>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 3 ttatactccctccgttcctaaatataaga 31
||||||||||||||| |||||||||||||
Sbjct: 139 ttatactccctccgtccctaaatataaga 111
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 actccctccgttcctaaatataaga 31
|||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataaga 30
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;EU626553.1/45919-45827 4572:Triticum urartu
Length = 93
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 2 attatactccctccgttcctaaatataagacttttt 37
||||||| ||||| ||||||||||||||||| ||||
Sbjct: 1 attatacaccctctgttcctaaatataagacgtttt 36
>RF00906;MIR1122;AF306827.1/682-774 4568:Triticum monococcum
Length = 93
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 2 attatactccctccgttcctaaatataagacttttt 37
||||||| ||||| ||||||||||||||||| ||||
Sbjct: 93 attatacaccctctgttcctaaatataagacgtttt 58
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagacttttt 37
||||||||||||||||||||||| ||| ||||
Sbjct: 89 tactccctccgttcctaaatatatgacgtttt 58
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatat 27
|||||||||||||||||||||||
Sbjct: 239 atactccctccgttcctaaatat 217
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatat 27
|||||||||||||||||||||||
Sbjct: 1 atactccctccgttcctaaatat 23
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 tatactccctccgttcctaaatataag 30
||||||||||||||||| |||||||||
Sbjct: 120 tatactccctccgttccaaaatataag 94
>RF00906;MIR1122;CT030168.3/87017-87173 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 tatactccctccgttcctaaatataag 30
||||||||||||||| |||||||||||
Sbjct: 3 tatactccctccgtttctaaatataag 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
|||||||||||||| |||||||||||
Sbjct: 154 atactccctccgtttctaaatataag 129
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 tatactccctccgttcctaaata 26
|||||||||||||||||||||||
Sbjct: 92 tatactccctccgttcctaaata 70
>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
Indica Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 tatactccctccgttcctaaatataag 30
|||||||||||||| ||||||||||||
Sbjct: 139 tatactccctccgtccctaaatataag 113
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataaga 31
||||||||||||| |||||||||||||
Sbjct: 128 atactccctccgtccctaaatataaga 102
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 tatactccctccgttcctaaatataagacttttta 38
||||||||||||||| | ||||||||||||||||
Sbjct: 3 tatactccctccgtttcacaatataagacttttta 37
>RF00906;MIR1122;AACV01013612.1/22689-22534 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 tatactccctccgttcctaaatataag 30
|||||||||||||| ||||||||||||
Sbjct: 154 tatactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 tatactccctccgttcctaaatataag 30
||||||| |||||||||||||||||||
Sbjct: 148 tatactcactccgttcctaaatataag 122
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 tatactccctccgttcctaaatataag 30
|||||||||||||| ||||||||||||
Sbjct: 119 tatactccctccgtccctaaatataag 93
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
Group
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataaga 31
||||||||||||| |||||||||||||
Sbjct: 128 atactccctccgtccctaaatataaga 102
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
|||||||||||||||| |||||||||
Sbjct: 154 atactccctccgttccaaaatataag 129
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
|||||||||||||||| |||||||||
Sbjct: 152 atactccctccgttccaaaatataag 127
>RF00906;MIR1122;AK248235.1/1048-956 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2 attatactccctccgttcctaaatat 27
||||||||||||| ||||||||||||
Sbjct: 1 attatactccctctgttcctaaatat 26
>RF00906;MIR1122;AAAA02004745.1/46871-46769 39946:Oryza sativa
Indica Group
Length = 103
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ccctccgttcctaaatataaga 31
||||||||||||||||||||||
Sbjct: 95 ccctccgttcctaaatataaga 74
>RF00906;MIR1122;DQ454157.1/29550-29395 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
|||||||||||| |||||||||||||
Sbjct: 152 tactccctccgtccctaaatataaga 127
>RF00906;MIR1122;AACV01003381.1/5259-5104 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02005173.1/305-150 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 153 atactccctccgtccctaaatataag 128
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01001639.1/6893-7021 39947:Oryza sativa
Japonica Group
Length = 129
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
|||||||||||| |||||||||||||
Sbjct: 125 tactccctccgtccctaaatataaga 100
>RF00906;MIR1122;AP005896.3/119867-120022 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02002822.1/13589-13717 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
|||||||||||| |||||||||||||
Sbjct: 125 tactccctccgtccctaaatataaga 100
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa Japonica
Group
Length = 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
|||||||||||| |||||||||||||
Sbjct: 117 tactccctccgtccctaaatataaga 92
>RF00906;MIR1122;AAAA02001165.1/17166-17008 39946:Oryza sativa
Indica Group
Length = 159
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
|||||||||||| |||||||||||||
Sbjct: 155 tactccctccgtccctaaatataaga 130
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
|||||||||||| |||||||||||||
Sbjct: 127 tactccctccgtccctaaatataaga 102
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
|||||||||||||||| |||||||||
Sbjct: 92 atactccctccgttccaaaatataag 67
>RF00906;MIR1122;AACV01007572.1/20450-20296 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 152 atactccctccgtccctaaatataag 127
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AC087851.4/84630-84468 4530:Oryza sativa (rice)
Length = 163
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgttcctaaatataag 30
||||||||||||| ||||||||||||
Sbjct: 160 atactccctccgtccctaaatataag 135
