miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 246 bits (124), Expect = 1e-64
Identities = 148/156 (94%)
Strand = Plus / Minus
Query: 45 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 104
||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||
Sbjct: 165 ctactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacg 106
Query: 105 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccct 164
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 105 gatgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatc 46
Query: 165 tagtgaaatcgcttaaaagacttatatttaggaacg 200
||||||||||||||||||||||||||||||||||||
Sbjct: 45 tagtgaaatcgcttaaaagacttatatttaggaacg 10
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
|||||||||||||||||||||||||| ||| || ||||||||||| | ||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 106 a 106
|
Sbjct: 61 a 61
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 149 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 200
||||||||||| || ||||||||||| || |||||||||||||||||||||
Sbjct: 104 tccgtatgtagtccattagtgaaatctctacaaagacttatatttaggaacg 155
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 172 bits (87), Expect = 2e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
|||||||||||||||||||||||||| ||| |||| ||||||||| || ||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatacgg 106
Query: 106 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 165
|||||||||||||||| |||||||| | ||||| |||||||||||| ||||||| |||||
Sbjct: 105 atgtatatagacatac-ttagagtacagattcactcattttgctccatatgtagcccctt 47
Query: 166 agtgaaatcgcttaaaagacttatatttaggaacg 200
|| |||||| || |||||||||| |||||||||||
Sbjct: 46 agagaaatctctaaaaagacttacatttaggaacg 12
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacata 102
|||||||||||||||||||| ||||| ||| |||||||||| ||| ||||||||||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacata 59
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 149 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 200
||||||||||| ||| |||||||| || ||||||||||||||||||||||
Sbjct: 105 tccgtatgtagtcccctagtgaaacttctaaaaagacttatatttaggaacg 156
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 172 bits (87), Expect = 2e-42
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
|||||||||||||||||||||||||| ||| ||||| |||||||||| | |||||| |||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacattcgg 60
Query: 106 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 165
||||||||||||||| |||||| |||| ||||| |||||||||||||||||||| | |
Sbjct: 61 atgtatatagacatattttagaatatagattcactcattttgctccgtatgtagtcgtct 120
Query: 166 agtgaaatcgcttaaaagacttatatttaggaacg 200
|| |||||| || ||||||||||||||||||||||
Sbjct: 121 agcgaaatctctaaaaagacttatatttaggaacg 155
Score = 77.8 bits (39), Expect = 7e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 44 tctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac 103
|||||||||||||||||||||||||||| ||| |||||||||| |||| | ||||||||
Sbjct: 166 tctactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatac 107
Query: 104 gga 106
|||
Sbjct: 106 gga 104
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 165 tagtgaaatcgcttaaaagacttatatttaggaacg 200
|||||||| | || ||||||||||||||||||||||
Sbjct: 45 tagtgaaacctctaaaaagacttatatttaggaacg 10
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 131 bits (66), Expect = 5e-30
Identities = 134/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
|||||||||||||||||||||||||| ||| ||||||||| | || ||| ||||||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagatttgaata-tggactacatacgg 108
Query: 106 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 165
||| |||||||| || |||||||| || ||||| |||||||||||||||||||| || |
Sbjct: 107 atgaatatagacgtattttagagtgtagattcactcattttgctccgtatgtag-tccat 49
Query: 166 agtgaaatcgcttaaaagacttatatttaggaac 199
| | |||| || |||||||||||||||||||||
Sbjct: 48 attagaatctctaaaaagacttatatttaggaac 15
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatt 84
||||||||| |||||||||||||||| ||| ||||||||
Sbjct: 5 tactccctctgttcctaaatataagtctttttagagatt 43
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 170 aaatcgcttaaaagacttatatttaggaacg 200
||||| || ||||||||||||||||||||||
Sbjct: 127 aaatctctaaaaagacttatatttaggaacg 157
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 117 bits (59), Expect = 8e-26
Identities = 132/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
||||||||||||||||||||||||| || |||||||| |||| | ||||||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagattgtacta-taaactacatacgg 59
Query: 106 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 165
||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||| | | |
Sbjct: 60 atgtacatagacatattttagagtatagattcactcattttgctccgtatgtagtctcct 119
Query: 166 agtgaaatcgcttaaaagacttatatttaggaacg 200
|||||||| || ||| | ||||||||| ||||||
Sbjct: 120 agtgaaatacctaaaaggtcttatattttggaacg 154
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 109 bits (55), Expect = 2e-23
Identities = 132/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
|||||||||| ||||||||||||||| |||||||||||||||||| ||| | ||||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcacta-tggaccacatacgg 105
Query: 106 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 165
|||||| |||| | ||||||||||| |||| ||||||| |||||||||| | || |
Sbjct: 104 atgtatgtagatgcattttagagtataggttcactcattttactccgtatgt-ggtccat 46
Query: 166 agtgaaatcgcttaaaagacttatatttaggaacg 200
| ||||||| | |||||||||||||||||||||
Sbjct: 45 aatgaaatctgtccaaagacttatatttaggaacg 11
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttca 87
|||||||||||||||||||||||||| |||| | ||||||||
Sbjct: 2 tactccctccgttcctaaatataagtctttggacagatttca 43
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 165 tagtgaaatcgcttaaaagacttatatttaggaa 198
|||||||||| || |||||||||||||||||||
Sbjct: 119 tagtgaaatctctacaaagacttatatttaggaa 152
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 103 bits (52), Expect = 1e-21
Identities = 131/156 (83%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 104
|||||||||||||||||||||||||| || |||||||| |||| | |||||||||
Sbjct: 3 ctactccctccgttcctaaatataagaccttttagagattgtacta-taaactacatacg 61
Query: 105 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccct 164
|||||| ||||||||| ||||||||||| |||| |||||||||||||||||||| |
Sbjct: 62 gatgtacatagacatattttagagtatagattcgctcattttgctccgtatgtagtcttc 121
Query: 165 tagtgaaatcgcttaaaagacttatatttaggaacg 200
||||||||| || ||| | ||||||||| ||||||
Sbjct: 122 tagtgaaatacctaaaaggtcttatattttggaacg 157
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 93.7 bits (47), Expect = 1e-18
Identities = 131/155 (84%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
|||||||||||||||||||||||||| || ||||| |||||||| |||| | ||||||||
Sbjct: 165 tactccctccgttcctaaatataagtcttcgtagatatttcact-gtggaccacatacgg 107
Query: 106 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 165
||||||||||| | |||| || || ||||| ||||||| |||||||||| | | |
Sbjct: 106 atgtatatagatgcatttta-tgtgtagattcactcatttttctccgtatgt-ggtctat 49
Query: 166 agtgaaatcgcttaaaagacttatatttaggaacg 200
||||||||| || |||||||||||||||||||||
Sbjct: 48 agtgaaatctctccaaagacttatatttaggaacg 14
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataagtttttgtagagatttcacta 90
||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataagtctttggagagatttcacta 49
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 93.7 bits (47), Expect = 1e-18
Identities = 130/155 (83%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
|||||||||||||||||||||||||| |||||||||||| ||||| ||| | |||||
Sbjct: 5 tactccctccgttcctaaatataagtctttgtagagattccacta-tggaccacata--- 60
Query: 106 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 165
||||||||| | |||||||| || ||||| |||||||||| ||||||||| || |
Sbjct: 61 --gtatatagatgcattttagagtgtagattcactcattttgcttcgtatgtag-tccat 117
Query: 166 agtgaaatcgcttaaaagacttatatttaggaacg 200
||||||||| || | |||||||||||||||||||
Sbjct: 118 agtgaaatctctacagagacttatatttaggaacg 152
Score = 77.8 bits (39), Expect = 7e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 104
|||||||||||||||||||||||||| | |||||||||||||||| ||| |||||||||
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcacta-tggactacatacg 104
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 85.7 bits (43), Expect = 3e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
|||||||||||||||||||||||||| ||| ||| ||||| |||||| ||| ||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttaaagaagtttcattagtggactatatacgg 64
Query: 106 atgtatatagacata 120
|||||||||||||||
Sbjct: 65 atgtatatagacata 79
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
|||||||||||||||||||||||||| ||| ||| ||||||||||| | ||||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92
Query: 106 a 106
|
Sbjct: 91 a 91
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 77.8 bits (39), Expect = 7e-14
Identities = 97/115 (84%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 104
|||||||||||||||||||||||||| || ||||||| |||||| | |||||||||
Sbjct: 1 ctactccctccgttcctaaatataagaccttttagagatctcacta-taaactacatacg 59
Query: 105 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 159
||||||| ||| |||| ||| | | || ||||| ||||||||||||||||||||
Sbjct: 60 gatgtatgtagtcatattttgggatgtaaattcactcattttgctccgtatgtag 114
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||||||||||||||||
Sbjct: 164 ctactccctccgttcctaaatataag 139
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 73.8 bits (37), Expect = 1e-12
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
|||||||||||||||||||||||||| ||| |||||||| ||||| ||| ||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacacta-tggactacatacgg 63
Query: 106 a 106
|
Sbjct: 64 a 64
Score = 69.9 bits (35), Expect = 2e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 134 attcaatcattttgctccgtatgtagacccttagtgaaatcgcttaaaagacttatattt 193
||||| |||||||||||||||||||| || | |||| |||| || |||||||||||||||
Sbjct: 79 attcactcattttgctccgtatgtagtccat-agtgtaatctctaaaaagacttatattt 21
Query: 194 aggaacg 200
|||||||
Sbjct: 20 aggaacg 14
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 50 ccctccgttcctaaatataagtttttgtagagatt 84
|||||||||||||||||||||| || ||||||||
Sbjct: 111 ccctccgttcctaaatataagtccttttagagatt 77
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 142 attttgctccgtatgtagacccttagtgaaatcgcttaaaagacttatattta 194
|||||||||||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 72 attttgctccgtatgtagacacctagtgaaatatcttaaaagacttatattta 20
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatataagt 71
||||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataagt 113
Score = 50.1 bits (25), Expect = 2e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
|||||||||||| | ||||||||||| ||| ||| |||||||||| | ||||||||||
Sbjct: 5 tactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatacgg 64
Query: 106 a 106
|
Sbjct: 65 a 65
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 69.9 bits (35), Expect = 2e-11
Identities = 75/87 (86%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 105
||||||||||||||||||||||||| || ||| ||| ||||| || ||||||||||
Sbjct: 166 tactccctccgttcctaaatataagaccttttaggtattacacta-tgaactacatacgg 108
Query: 106 atgtatatagacatactttagagtata 132
||||||||||||||| ||||| |||||
Sbjct: 107 atgtatatagacatattttagggtata 81
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataag 29
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 58.0 bits (29), Expect = 6e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatataagtttttgtagagatttcacta 90
|||||||||| ||||||||||||||| ||| || |||||||||||
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttcacta 49
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataag 29
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatataag 70
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatataag 70
|||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52
>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 43 ctctactccctccgttcctaaatataag 70
||||||||||||||| ||||||||||||
Sbjct: 2 ctctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatataa 69
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 43 ctctactccctccgttcctaaatataag 70
||||||||||||||| ||||||||||||
Sbjct: 2 ctctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 actccctccgttcctaaatataag 70
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataagt 71
|||||||||||||||| ||||||||||
Sbjct: 4 ctactccctccgttccaaaatataagt 30
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatata 68
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;EU730896.1/84586-84679 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 44 tctactccctccgttcctaaata 66
|||||||||||||||||||||||
Sbjct: 92 tctactccctccgttcctaaata 70
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 44 tctactccctccgttcctaaatataag 70
|||||||||||||| ||||||||||||
Sbjct: 3 tctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01007836.1/7963-7867 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 44 tctactccctccgttcctaaatataag 70
|||||||||||||| ||||||||||||
Sbjct: 95 tctactccctccgtccctaaatataag 69
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatata 68
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 44 tctactccctccgttcctaaatataag 70
|||||||||||||| ||||||||||||
Sbjct: 155 tctactccctccgtccctaaatataag 129
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatat 67
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatat 67
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatat 67
||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatat 67
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatat 67
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatat 67
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatat 67
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 46 tactccctccgttcctaaatat 67
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;ABXC01002968.1/30248-30403 4558:Sorghum bicolor
(sorghum)
Length = 156
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataagtttt 74
|||||||||||||||| || ||||||||||
Sbjct: 4 ctactccctccgttccaaattataagtttt 33
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa Japonica
Group
Length = 110
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||| ||||||||||||
Sbjct: 107 ctactccctccgtccctaaatataag 82
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||| ||||||||||||
Sbjct: 153 ctactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02028211.1/1243-1359 39946:Oryza sativa
Indica Group
Length = 117
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||| ||||||||||||
Sbjct: 112 ctactccctccgtccctaaatataag 87
>RF00906;MIR1122;AC136448.2/118247-118097 39947:Oryza sativa
Japonica Group
Length = 151
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01023423.1/18495-18379 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AC120985.3/48011-47950 39947:Oryza sativa
Japonica Group
Length = 62
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||| ||||||||||||
Sbjct: 59 ctactccctccgtccctaaatataag 34
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataag 70
||||| ||||||||||||||||||||
Sbjct: 4 ctacttcctccgttcctaaatataag 29
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatataagt 71
|||||||||||| |||||||||||||
Sbjct: 130 tactccctccgtccctaaatataagt 105
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02019543.1/35421-35577 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||| ||||||||||||
Sbjct: 154 ctactccctccgtccctaaatataag 129
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 46 tactccctccgttcctaaatataagt 71
||||| ||||||||||||||||||||
Sbjct: 146 tactcactccgttcctaaatataagt 121
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa Japonica
Group
Length = 132
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 ctactccctccgttcctaaatataag 70
||||||||||||| ||||||||||||
Sbjct: 129 ctactccctccgtccctaaatataag 104
