miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 93.7 bits (47), Expect = 5e-19
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
|||||||||||||||||||||| ||||||||||| ||||| | |||||||||||| ||||
Sbjct: 99 ctccctccgtctcaaaataagtatctcagctttacactagctctagtataaagttgtact 40
Query: 72 aagcttgaaacatttattttgaggcggagcgagta 106
||| |||| | | |||||||| | ||||| |||||
Sbjct: 39 aagtttgagaaagttattttgggacggagggagta 5
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 93.7 bits (47), Expect = 5e-19
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
||||||||||| |||||||| ||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 99 ctccctccgtcccaaaataactgtctcaactttatactagatctagtataaatttatact 40
Query: 72 aagcttgaaacatttattttgaggcggagcgagta 106
|||||| | ||| |||||||| | ||||| |||||
Sbjct: 39 aagcttaagacagttattttgggacggagggagta 5
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 85.7 bits (43), Expect = 1e-16
Identities = 83/95 (87%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
|||||||||||||||||||||| ||| | |||||||||| || ||| |||||||||||
Sbjct: 7 ctccctccgtctcaaaataagtttcttaattttatactagctt-agtgcaaagttatact 65
Query: 72 aagcttgaaacatttattttgaggcggagcgagta 106
|||||||| ||| |||||||||| ||||| |||||
Sbjct: 66 aagcttgagacaattattttgagacggagggagta 100
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctca 39
|||||||||||||||||||| |||||||
Sbjct: 98 ctccctccgtctcaaaataattgtctca 71
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
||||||||||| |||||||| ||||||| ||||||||||| | || |||||| |||||||
Sbjct: 99 ctccctccgtcccaaaataactgtctcaactttatactagatctaatataaatttatact 40
Query: 72 aagcttgaaacatttattttgaggcggagcgagta 106
|||||| | ||| |||||||| | ||||| |||||
Sbjct: 39 aagcttaagacagttattttgggacggagggagta 5
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
||||||||||| |||||||||||||||| |||| |||||| | ||||| ||| ||| |||
Sbjct: 99 ctccctccgtcccaaaataagtgtctcaactttgtactagctgtagtacaaaattacact 40
Query: 72 aagcttgaaacatttattttgaggcggagcgagta 106
|||||||| ||| |||||||| | ||||| |||||
Sbjct: 39 aagcttgagacacttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctca 39
||||||||||| ||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctca 34
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
|||||||||||||||||||||| ||||| ||||| ||||| | |||||||||||| ||||
Sbjct: 99 ctccctccgtctcaaaataagtatctcaactttacactagctctagtataaagttgtact 40
Query: 72 aagcttgaaacatttattttgaggcggagcgagta 106
||| |||| | | |||||||| | ||||| |||||
Sbjct: 39 aagtttgagaaagttattttgggacggagggagta 5
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
||||||||||| |||||||||||||| | |||| ||||| ||||||| |||||| ||||
Sbjct: 99 ctccctccgtcccaaaataagtgtcttaactttgtactaactttagtacaaagttgtact 40
Query: 72 aagcttgaaacatttattttgaggcggagcgagta 106
| |||||| ||| |||||||||| ||||| |||||
Sbjct: 39 aggcttgagacacttattttgagacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctca 39
||||||||||||||||||||||||||||
Sbjct: 7 ctccctccgtctcaaaataagtgtctca 34
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 24 caaaataagtgtctcagctttatactagttttagtataaagttatactaagcttgaaaca 83
|||||||||||||||| |||| |||||||| ||||| |||||| ||||| |||||| |||
Sbjct: 87 caaaataagtgtctcaactttgtactagttctagtacaaagttgtactaggcttgagaca 28
Query: 84 tttattttgaggcggagcgagtatt 108
|||||||| | ||||| |||||||
Sbjct: 27 gttattttgggacggagtgagtatt 3
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 79.8 bits (40), Expect = 7e-15
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
||||||||||| |||||||| ||||||| |||| || || ||||||| |||||| ||||
Sbjct: 99 ctccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaagttgtact 40
Query: 72 aagcttgaaacatttattttgaggcggagcgagtat 107
|||||||| ||| |||||||| | ||||| ||||||
Sbjct: 39 aagcttgagacacttattttgggacggagggagtat 4
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctca 39
||||||||||| ||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctca 34
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 10 tgctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttata 69
||||||||||||| |||||||||||||||| |||| |||||| |||| || |||||| ||
Sbjct: 5 tgctccctccgtcccaaaataagtgtctcaactttgtactagctttaatacaaagttgta 64
Query: 70 ctaagcttgaaacatttattttgag 94
||| |||| ||| ||||||||||
Sbjct: 65 ctagagttgagacacttattttgag 89
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 73.8 bits (37), Expect = 4e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
||||||||||||||||||| |||||||| ||||| |||| | |||||||||||| ||||
Sbjct: 7 ctccctccgtctcaaaataggtgtctcaactttaccctagctctagtataaagttgtact 66
Query: 72 aagcttgaaacatttattttg 92
||| |||| | | ||||||||
Sbjct: 67 aagtttgagaaagttattttg 87
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 71.9 bits (36), Expect = 2e-12
Identities = 82/96 (85%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
||||||||||| |||||||||||||||| |||| ||||| | ||||||||| || ||||
Sbjct: 98 ctccctccgtcccaaaataagtgtctca-ctttgtactaactctagtataaaattgtact 40
Query: 72 aagcttgaaacatttattttgaggcggagcgagtat 107
||| |||| ||| |||||||| | ||||| ||||||
Sbjct: 39 aaggttgagacacttattttgggacggagggagtat 4
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctca 39
||||||||||| ||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctca 34
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
|||||||||||||||||||| ||||||| |||| || ||| | ||||| |||||| ||||
Sbjct: 99 ctccctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagttgtact 40
Query: 72 aagcttgaaacatttatttt 91
|||||| | ||| |||||||
Sbjct: 39 aagcttaagacacttatttt 20
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 24 caaaataagtgtctcagctttatactagttttagtataaagttatactaagcttgaaaca 83
|||||||||||||||| |||| |||||| | || || |||||| |||||||||||| |||
Sbjct: 87 caaaataagtgtctcaactttgtactagctctactacaaagttgtactaagcttgagaca 28
Query: 84 tttattttgaggcggagcgagtat 107
|||||||||| |||| ||||||
Sbjct: 27 gttattttgagatggagggagtat 4
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
||||||||||| |||||||| ||||||| |||| || || ||||||| || ||| ||||
Sbjct: 99 ctccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaggttgtact 40
Query: 72 aagcttgaaacatttattttgaggcggagcgagtat 107
|||||||| ||| |||||||| | ||||| ||||||
Sbjct: 39 aagcttgagacacttattttgggacggagggagtat 4
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctca 39
||||||||||| ||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctca 34
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 69.9 bits (35), Expect = 7e-12
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
|||| |||||| |||||||||||||||| ||||||||||| | ||||| ||| || || |
Sbjct: 7 ctccatccgtcccaaaataagtgtctcaactttatactagctatagtacaaacttgtatt 66
Query: 72 aagcttgaaacatttattttgaggcggagcgagta 106
||| |||| ||| |||||||| | ||||| |||||
Sbjct: 67 aagtttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
|||||||||| |||||||||||||||| ||| |||||| | ||||| |||||| ||||
Sbjct: 7 ctccctccgttccaaaataagtgtctcaaatttgtactagctctagtacaaagttgtact 66
Query: 72 aagcttgaaacatttattttg 92
|||||||| | | ||||||||
Sbjct: 67 aagcttgagatagttattttg 87
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
|||||||| || |||||||||||||||| |||| ||||| ||||||| |||||| ||||
Sbjct: 106 ctccctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagttgtact 47
Query: 72 aagct 76
|||||
Sbjct: 46 aagct 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtct 37
||||||||||| ||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 63.9 bits (32), Expect = 4e-10
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
|||| |||||| |||||||||||||||| |||| |||| | ||||| |||||| ||||
Sbjct: 7 ctccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaagttgtact 66
Query: 72 aagcttgaaacatttattttgaggcggagcgagtat 107
||| |||| ||| |||||||| | ||||| ||||||
Sbjct: 67 aaggttgagacacttattttgggacggagggagtat 102
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctca 39
||||||||||| ||||||||||||||||
Sbjct: 99 ctccctccgtcccaaaataagtgtctca 72
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 63.9 bits (32), Expect = 4e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
|||||||| || |||||||||||| | | ||| || ||| |||||||||||||||||||
Sbjct: 99 ctccctccatcccaaaataagtgtgttaattttgtattagctttagtataaagttatact 40
Query: 72 aagcttgaaacatttatttt 91
||| |||| ||| |||||||
Sbjct: 39 aagattgagacacttatttt 20
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 63.9 bits (32), Expect = 4e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
||||||||||| |||||||| ||||| | |||| | |||| | ||||||||| |||||||
Sbjct: 99 ctccctccgtcccaaaataattgtcttaactttgttctagctctagtataaaattatact 40
Query: 72 aagcttgaaacatttatttt 91
|||||| | ||| |||||||
Sbjct: 39 aagcttaagacacttatttt 20
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 24 caaaataagtgtctcagctttatactagttttagtataaagttatactaagcttgaaaca 83
|||||||| ||||| | |||| |||||| |||| |||||| |||||||||| || | |||
Sbjct: 19 caaaataactgtcttaactttgtactagctttactataaatttatactaagtttaagaca 78
Query: 84 tttattttgaggcggagcgagta 106
||||||||| | ||||| |||||
Sbjct: 79 tttattttgcgacggagggagta 101
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
||||||| |||||||||||| ||||||| | || |||||| | ||||| ||| || ||||
Sbjct: 99 ctccctctgtctcaaaataactgtctcaacattgtactagctctagtacaaaattgtact 40
Query: 72 aagcttgaaacatttattttgaggcggagcgagta 106
||| || | ||| |||||||||| ||||| |||||
Sbjct: 39 aagattaagacacttattttgagacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtct 37
||||||||||||||||||||||||||
Sbjct: 7 ctccctccgtctcaaaataagtgtct 32
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 58.0 bits (29), Expect = 3e-08
Identities = 80/97 (82%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
|||||||| || |||||||||||||||| |||| ||||| | ||||| ||| || ||||
Sbjct: 99 ctccctccatcccaaaataagtgtctcaactttgtactatctctagtacaaatttttact 40
Query: 72 aagcttgaaacatttattttgaggcggagcgagtatt 108
||||| | ||| |||||||| | ||||| |||||||
Sbjct: 39 aagctcaagacacttattttgggacggagggagtatt 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtct 37
||||||||||| ||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 10 tgctccctccgtctcaaaataagtgtctcagcttta 45
||||||||||||| |||||||||||||||| |||||
Sbjct: 5 tgctccctccgtcccaaaataagtgtctcaacttta 40
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
||||||||||| |||||||| ||||||| ||| ||||| ||||||| |||||| ||||
Sbjct: 147 ctccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagttgtact 88
Query: 72 aagcttga 79
||| ||||
Sbjct: 87 aaggttga 80
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/50 (90%), Gaps = 2/50 (4%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtg--tctcagctttatactagttttagta 59
||||||||||| ||||||||||| ||||| |||||||||| ||||||||
Sbjct: 7 ctccctccgtcccaaaataagtggatctcaactttatactatttttagta 56
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagtt 66
||||||||||| |||| |||||| |||| |||||||||| ||||||| ||||||
Sbjct: 88 ctccctccgtcccaaattaagtgactcaactttatactaactttagtacaaagtt 34
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagtt 66
||||||| ||| ||||||||||| |||| |||| ||||| |||||||||||||
Sbjct: 7 ctccctctgtcccaaaataagtgactcaactttgtactaaagttagtataaagtt 61
>RF00906;MIR1122;AY268139.1/69673-69778 4513:Hordeum vulgare
Length = 106
Score = 52.0 bits (26), Expect = 2e-06
Identities = 78/94 (82%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 15 cctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttata-ctaa 73
||||||||||||||||| ||||| | ||||||| || ||| |||||||| || || |||
Sbjct: 97 cctccgtctcaaaataactgtcttaactttatattaatttcagtataaaattgtatttaa 38
Query: 74 gcttgaaacatttattttgaggcggagcgagtat 107
| || ||||| ||||||||| ||||| ||||||
Sbjct: 37 gtttaaaacagttattttgaaacggagggagtat 4
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 71
||||||||||| |||||||| ||||||| |||| |||||| | ||||| ||| || ||||
Sbjct: 99 ctccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaaattgtact 40
Query: 72 a 72
|
Sbjct: 39 a 39
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctcagcttt 44
|||||||||||||||||||| ||||||| ||||
Sbjct: 7 ctccctccgtctcaaaataactgtctcaacttt 39
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatacta 50
||||||||||| ||||||||||| |||| |||| |||||
Sbjct: 98 ctccctccgtcccaaaataagtgactcaactttgtacta 60
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctc 38
||||||||||| |||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctc 33
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 12 ctccctccgtctcaaaataagtgtctcagctttatacta 50
||||||||||| ||||||||||| |||| |||| |||||
Sbjct: 7 ctccctccgtcccaaaataagtgactcaactttgtacta 45
>RF00906;MIR1122;AF427791.1/40179-40064 4513:Hordeum vulgare
Length = 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 42 tttatactagttttagtataaagtta 67
||||||||| ||||||||||||||||
Sbjct: 69 tttatactaattttagtataaagtta 44
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 ctccctccgtctcaaaataagt 33
||||||||||||||||||||||
Sbjct: 114 ctccctccgtctcaaaataagt 93
