miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 14 tattactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaact 73
||||||||||||||||| ||||||| ||||| ||||||| ||||| ||||||||| | ||
Sbjct: 2 tattactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatct 61
Query: 74 agtataacgttgagacacttatttt 98
||||||| ||||||||| |||||||
Sbjct: 62 agtataaagttgagacagttatttt 86
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 14 tattactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaact 73
||||||||||||||||| ||||||||||||| ||||||| | ||| ||| ||||| | ||
Sbjct: 2 tattactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagct 61
Query: 74 agtataacgttgagacacttattttaacacggaaggagtata 115
|||| || ||||||||||||||||| ||||| ||||||||
Sbjct: 62 agtacaaagttgagacacttattttgggacggagggagtata 103
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtct 44
|||||||||||||| |||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtct 74
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 89.7 bits (45), Expect = 8e-18
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 14 tattactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaact 73
||||||||||||||||| ||||||| ||||| ||||||| ||||| |||||| || | ||
Sbjct: 2 tattactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatct 61
Query: 74 agtataacgttgagacacttatttt 98
||||||| ||||||||| |||||||
Sbjct: 62 agtataaagttgagacagttatttt 86
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
|||||||||||||| ||||||| ||||| || ||||||| || ||| ||||| | |||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42
Query: 77 ataacgttgagacacttatttt 98
|||| |||||||||||||||||
Sbjct: 41 ataaagttgagacacttatttt 20
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 81.8 bits (41), Expect = 2e-15
Identities = 83/97 (85%)
Strand = Plus / Plus
Query: 20 tccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagtata 79
|||||| |||||||||||||||||| ||||||| || |||||| ||||| | ||| || |
Sbjct: 8 tccctcggtcctaaaataagtgtcttaagcttagtacaactttgtactagagctaataca 67
Query: 80 acgttgagacacttattttaacacggaaggagtataa 116
| ||||||||| ||||||| | ||||| |||||||||
Sbjct: 68 aagttgagacagttattttgagacggagggagtataa 104
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
|||||||||||| | ||||||||||||| |||||||||| || ||| ||||||| ||| |
Sbjct: 5 tactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaat 64
Query: 77 ataacgttgagacacttatttt 98
| || ||||||||| |||||||
Sbjct: 65 acaaagttgagacagttatttt 86
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
||||| |||||||| ||||||| ||||| |||| || || |||||| ||||| |||||||
Sbjct: 5 tactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaactagt 64
Query: 77 ataacgttgagacacttatttt 98
| || |||||||||||||||||
Sbjct: 65 acaaagttgagacacttatttt 86
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
|||||||||||||| ||||||||||||| ||||||| || |||||| ||||||| || |
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagttaat 64
Query: 77 ataacgttgagacacttatttt 98
| || ||||||||| |||||||
Sbjct: 65 acaaagttgagacatttatttt 86
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 73.8 bits (37), Expect = 5e-13
Identities = 82/97 (84%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
|||||||||||||| ||||||||||||| || |||| || |||||| ||||| | ||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagttagt 42
Query: 77 ataacgttgagacacttattttaacacggaaggagta 113
||| |||||||||||||||| ||||||||||||
Sbjct: 41 gtaaaattgagacacttattttgggacggaaggagta 5
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 73.8 bits (37), Expect = 5e-13
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
|||||||||||||| ||||||| | ||| || |||| || |||||||||||| | |||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 77 ataacgttgagacacttattttaacacggaaggagta 113
||| ||||||| ||||||||| | ||||| ||||||
Sbjct: 65 gtaaagttgagatacttattttgagacggagggagta 101
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
|||||||||||||| ||||||||||||| |||||| || || ||| ||||| | ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagatagt 64
Query: 77 ataacgttgagacacttatttt 98
| || |||||||||||||||||
Sbjct: 65 acaaagttgagacacttatttt 86
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaa 70
|||||| ||||| ||||||||||||||| || |||| |||||||||||||||||
Sbjct: 5 tactccttccgttctaaaataagtgtctcaatcttagtataactttatactaaa 58
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 83 ttgagacacttattttaacacggaaggagtata 115
||||||||||||||||| ||||||||||||||
Sbjct: 35 ttgagacacttattttagaacggaaggagtata 3
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
|||||||||||||| ||||||||||||| ||||||| || ||| || ||||||| || |
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagttaat 64
Query: 77 ataacgttgagacacttatttt 98
| || ||||||||| |||||||
Sbjct: 65 acaaagttgagacatttatttt 86
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
||||||||||||| ||||||||||||| |||| || || |||||| ||||||| ||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64
Query: 77 ataacgttgagacacttatttt 98
| || ||| |||||||||||||
Sbjct: 65 acaaagttaagacacttatttt 86
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtct 44
|||||||||||||| |||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtct 74
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
|||||||||||||| ||||||| | ||| || |||| || |||||||||||| | |||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 77 ataacgttgagacacttattttaacacggaaggagta 113
||| | ||||| ||||||||| | ||||| ||||||
Sbjct: 65 gtaaagctgagatacttattttgagacggagggagta 101
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 63.9 bits (32), Expect = 5e-10
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
|||||||||||| | ||||||| | ||| ||||||| || |||||| ||||| | |||||
Sbjct: 101 tactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagctagt 42
Query: 77 ataacgttgagacacttattttaacacggaaggagtataa 116
| || |||||||||||||||| ||||| |||||||||
Sbjct: 41 acaaatttgagacacttattttggaacggagggagtataa 2
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 60.0 bits (30), Expect = 8e-09
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
|||||||||||||| ||||||||||||| || |||| || || ||||||||| | ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagttagt 64
Query: 77 ataacgttgagacacttatttt 98
| || | |||||||||||||||
Sbjct: 65 acaaag-tgagacacttatttt 85
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtct 44
|||||||||||||| |||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgtct 73
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 60.0 bits (30), Expect = 8e-09
Identities = 82/98 (83%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
||||||||||||| ||||||| ||||| ||||||| ||||||||| ||| || |||||
Sbjct: 100 tactccctccgtctcaaaataattgtctcaagcttagtataactttgcact-aagctagt 42
Query: 77 ataacgttgagacacttattttaacacggaaggagtat 114
|||| || ||| ||||||||| | ||||| |||||||
Sbjct: 41 ataaaattaagaaacttattttgagacggagggagtat 4
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 60.0 bits (30), Expect = 8e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
||||||||||||| ||||||| ||||| || |||| ||||| |||||| |||| |||||
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42
Query: 77 ataacgttgagacacttatttt 98
| || ||| ||||| |||||||
Sbjct: 41 acaaagttaagacagttatttt 20
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 60.0 bits (30), Expect = 8e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
||||| |||||| |||||||||||||| ||||||| ||||| ||||||||| | ||||
Sbjct: 5 tactctctccgttttaaaataagtgtcttaagcttagtataattttatactagagctaga 64
Query: 77 ataacgttgagacacttatttt 98
| || ||| ||||| |||||||
Sbjct: 65 acaaagttaagacaattatttt 86
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 60.0 bits (30), Expect = 8e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
|||||||||| || ||||||| ||||| ||||||| || |||||| || || | |||||
Sbjct: 5 tactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagctagt 64
Query: 77 ataacgttgagacacttatttt 98
| || |||||||||||||||||
Sbjct: 65 acaaagttgagacacttatttt 86
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 60.0 bits (30), Expect = 8e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
||||||||||||| ||||||||||||| || |||| || || ||| ||||| | |||||
Sbjct: 5 tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64
Query: 77 ataacgttgagacacttatttt 98
| || ||||||||| |||||||
Sbjct: 65 acaatgttgagacagttatttt 86
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 19 ctccctccgtcctaaaataagtgtctaaagcttaatataactttatactaa 69
|||||||||||| ||||||||||||| || ||| ||||||||| ||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttagtataactttgtactaa 57
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtc 43
|||||||||||||||||||||||||||
Sbjct: 102 tactccctccgtcctaaaataagtgtc 76
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
|||||||||||| | ||||||||||||| ||| || || || ||| ||||| | |||||
Sbjct: 5 tactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagctagt 64
Query: 77 ataacgttgagacacttatttt 98
| || ||||||||| |||||||
Sbjct: 65 acaaagttgagacagttatttt 86
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 21 ccctccgtcctaaaataagtgtctaaagcttaatataactttatac 66
|||||||||| ||||||||||||| ||||||| || || |||||||
Sbjct: 9 ccctccgtcccaaaataagtgtcttaagcttagtacaattttatac 54
>RF01058;MIR806;AACV01007528.1/40785-40545 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcctaaaataagtg 216
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtct 44
|||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtct 44
|||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtct 32
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 47 agcttaatataactttatactaaaactagtataacgttgagacacttatttt 98
|||||| || |||||| ||||||| ||||| || |||||||||||||||||
Sbjct: 42 agcttagtacaactttgtactaaagttagtacaaagttgagacacttatttt 93
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 32 aaaataagtgtctaaagcttaatataactttatactaaaactagtataacgttgagacac 91
||||||||||||| || || || |||||| || |||| |||||| || ||||||||||
Sbjct: 86 aaaataagtgtctcaactctagtacaactttgtattaaagctagtacaaagttgagacac 27
Query: 92 ttatttt 98
|||||||
Sbjct: 26 ttatttt 20
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 ctccctccgtcctaaaataagtgtct 44
|||||||||||| |||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 19 ctccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagtat 78
|||||| ||||| ||||||||||||| || |||| || |||||| |||||| |||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaaccttagtacaactttgcactaaatttagtac 66
Query: 79 aacgttgagac 89
|| ||||||||
Sbjct: 67 aaagttgagac 77
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 71/87 (81%)
Strand = Plus / Minus
Query: 27 gtcctaaaataagtgtctaaagcttaatataactttatactaaaactagtataacgttga 86
|||| ||||||| | ||| || |||| || |||||||||||| | |||| ||| |||||
Sbjct: 91 gtcccaaaataactttctcaaacttagtacaactttatactagagctagggtaaagttga 32
Query: 87 gacacttattttaacacggaaggagta 113
||||| |||||| | ||||| ||||||
Sbjct: 31 gacacctattttgagacggagggagta 5
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtc 43
||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcttaaaataagtgtc 31
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtc 43
|||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtc 43
|||||||||||||| ||||||||||||
Sbjct: 102 tactccctccgtcccaaaataagtgtc 76
>RF00906;MIR1122;ABRL01001046.1/3877-3720 65489:Oryza barthii
Length = 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 ttactccctccgtcctaaaataa 38
|||||||||||||||||||||||
Sbjct: 4 ttactccctccgtcctaaaataa 26
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 attactccctccgtcctaaaata 37
|||||||||||||||||||||||
Sbjct: 3 attactccctccgtcctaaaata 25
>RF00906;MIR1122;AAAA02024971.1/2546-2390 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 attactccctccgtcctaaaata 37
|||||||||||||||||||||||
Sbjct: 3 attactccctccgtcctaaaata 25
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgt 42
|||||||||||||| |||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtgt 27
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ttactccctccgtcctaaaataagtg 41
||||||||||||||| ||||||||||
Sbjct: 1 ttactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 ttactccctccgtcctaaaataagtg 41
||||||||||||||| ||||||||||
Sbjct: 241 ttactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ttactccctccgtcctaaaataagtg 41
||||||||||||||| ||||||||||
Sbjct: 1 ttactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 ttactccctccgtcctaaaataagtg 41
||||||||||||||| ||||||||||
Sbjct: 241 ttactccctccgtcccaaaataagtg 216
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 68/82 (82%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctaaagcttaatataactttatactaaaactagt 76
||||||||||||| ||||||| ||||| || ||| || |||||| ||||| | |||||
Sbjct: 5 tactccctccgtctcaaaataactgtctcaa-ctttgtacaactttgtactagagctagt 63
Query: 77 ataacgttgagacacttatttt 98
| || ||||||||| |||||||
Sbjct: 64 acaaagttgagacagttatttt 85
>RF00906;MIR1122;AP008213.1/16335065-16334954 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 14 tattactccctccgtcctaaaa 35
||||||||||||||||||||||
Sbjct: 111 tattactccctccgtcctaaaa 90
>RF00906;MIR1122;AAAA02007712.1/608-473 39946:Oryza sativa Indica
Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 ttactccctccgtcctaaaata 37
||||||||||||||||||||||
Sbjct: 133 ttactccctccgtcctaaaata 112
>RF00906;MIR1122;AACV01016108.1/6300-6411 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tattactccctccgtcctaaaa 35
||||||||||||||||||||||
Sbjct: 2 tattactccctccgtcctaaaa 23
>RF00906;MIR1122;AAAA02004745.1/3305-3414 39946:Oryza sativa Indica
Group
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 ttactccctccgtcctaaaata 37
||||||||||||||||||||||
Sbjct: 107 ttactccctccgtcctaaaata 86
>RF00906;MIR1122;AACV01013318.1/27232-27074 39947:Oryza sativa
Japonica Group
Length = 159
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 ttactccctccgtcctaaaata 37
||||||||||||||||||||||
Sbjct: 4 ttactccctccgtcctaaaata 25
>RF00906;MIR1122;AAAA02010499.1/21534-21382 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataa 38
||||||||||||||||||||||
Sbjct: 149 tactccctccgtcctaaaataa 128
>RF00906;MIR1122;AP003508.3/31246-31125 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataa 38
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcctaaaataa 26
