miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 14 tattactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaact 73
||||||||||||||||| ||||||| ||||| ||||||| ||||| ||||||||||| ||
Sbjct: 2 tattactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatct 61
Query: 74 agtataacgttgagacacttatttt 98
||||||| ||||||||| |||||||
Sbjct: 62 agtataaagttgagacagttatttt 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||||||| ||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 99.6 bits (50), Expect = 9e-21
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 14 tattactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaact 73
||||||||||||||||| ||||||||||||||||||||| | ||| ||| ||||| | ||
Sbjct: 2 tattactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagct 61
Query: 74 agtataacgttgagacacttattttaagacggaaagagtata 115
|||| || ||||||||||||||||| |||||| |||||||
Sbjct: 62 agtacaaagttgagacacttattttgggacggagggagtata 103
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||||||| ||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaa 71
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 14 tattactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaact 73
||||||||||||||||| ||||||| ||||| ||||||| ||||| |||||| |||| ||
Sbjct: 2 tattactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatct 61
Query: 74 agtataacgttgagacacttatttt 98
||||||| ||||||||| |||||||
Sbjct: 62 agtataaagttgagacagttatttt 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||||||| ||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 91.7 bits (46), Expect = 2e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
||||| |||||||| ||||||| |||||||||| || || |||||| |||||||||||||
Sbjct: 5 tactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaactagt 64
Query: 77 ataacgttgagacacttatttt 98
| || |||||||||||||||||
Sbjct: 65 acaaagttgagacacttatttt 86
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
|||||||||||||| ||||||| |||||||| ||||||| || ||| ||||| | |||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42
Query: 77 ataacgttgagacacttatttt 98
|||| |||||||||||||||||
Sbjct: 41 ataaagttgagacacttatttt 20
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||| ||||||| ||||||||||||||||
Sbjct: 5 tactccatccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
|||||||||||||| ||||||| | |||||| |||| || |||||||||||||| |||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 77 ataacgttgagacacttattttaagacgga 106
||| ||||||| ||||||||| |||||||
Sbjct: 65 gtaaagttgagatacttattttgagacgga 94
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 89.7 bits (45), Expect = 8e-18
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
|||||||||||||| |||||||||||||||| |||| || |||||| ||||||| ||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagttagt 42
Query: 77 ataacgttgagacacttattttaagacggaaagagta 113
||| |||||||||||||||| ||||||| |||||
Sbjct: 41 gtaaaattgagacacttattttgggacggaaggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||| ||||||| ||||||||||||||||
Sbjct: 5 tactccttccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 89.7 bits (45), Expect = 8e-18
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 20 tccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagtata 79
|||||| |||||||||||||||||| ||||||| || |||||| ||||||| ||| || |
Sbjct: 8 tccctcggtcctaaaataagtgtcttaagcttagtacaactttgtactagagctaataca 67
Query: 80 acgttgagacacttattttaagacggaaagagtataa 116
| ||||||||| ||||||| ||||||| ||||||||
Sbjct: 68 aagttgagacagttattttgagacggagggagtataa 104
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
|||||||||||||| ||||||| | |||||| |||| || |||||||||||||| |||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 77 ataacgttgagacacttattttaagacgga 106
||| | ||||| ||||||||| |||||||
Sbjct: 65 gtaaagctgagatacttattttgagacgga 94
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 75.8 bits (38), Expect = 1e-13
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
|||||||||||||| |||||||||||||||| |||| || || ||||||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagttagt 64
Query: 77 ataacgttgagacacttatttt 98
| || | |||||||||||||||
Sbjct: 65 acaaag-tgagacacttatttt 85
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctca 46
|||||||||||||| |||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgtctca 71
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
|||||||||||||| ||||||||||||| |||||| || || ||| ||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagatagt 64
Query: 77 ataacgttgagacacttatttt 98
| || |||||||||||||||||
Sbjct: 65 acaaagttgagacacttatttt 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||| ||| ||||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtctcaa 71
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
|||||||||||| | ||||||| | ||||||||||| || |||||| ||||||| |||||
Sbjct: 101 tactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagctagt 42
Query: 77 ataacgttgagacacttatttt 98
| || ||||||||||||||||
Sbjct: 41 acaaatttgagacacttatttt 20
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||||| | ||||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtctcaa 35
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
|||||||||| || ||||||| ||||||||||||| || |||||| || |||| |||||
Sbjct: 5 tactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagctagt 64
Query: 77 ataacgttgagacacttatttt 98
| || |||||||||||||||||
Sbjct: 65 acaaagttgagacacttatttt 86
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
|||||||||||||| ||||||||||||||||||||| || |||||| ||||| | || |
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagttaat 64
Query: 77 ataacgttgagacacttatttt 98
| || ||||||||| |||||||
Sbjct: 65 acaaagttgagacatttatttt 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||||||| ||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaa 71
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatacta 68
|||||| ||||| |||||||||||||||||| |||| |||||||||||||||
Sbjct: 5 tactccttccgttctaaaataagtgtctcaatcttagtataactttatacta 56
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 69.9 bits (35), Expect = 8e-12
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
||||||||||||| ||||||||||||| || |||| || || ||| ||||||| |||||
Sbjct: 5 tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64
Query: 77 ataacgttgagacacttattttaagac 103
| || ||||||||| ||||||| ||||
Sbjct: 65 acaatgttgagacagttattttgagac 91
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
|||||||||||| | ||||||||||||| |||||||||| || ||| ||||| | ||| |
Sbjct: 5 tactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaat 64
Query: 77 ataacgttgagacacttatttt 98
| || ||||||||| |||||||
Sbjct: 65 acaaagttgagacagttatttt 86
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 67.9 bits (34), Expect = 3e-11
Identities = 77/90 (85%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
||||||||||||| ||||||| ||||||||||||| ||||||||| |||| | |||||
Sbjct: 100 tactccctccgtctcaaaataattgtctcaagcttagtataactttgcacta-agctagt 42
Query: 77 ataacgttgagacacttattttaagacgga 106
|||| || ||| ||||||||| |||||||
Sbjct: 41 ataaaattaagaaacttattttgagacgga 12
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
||||| |||||| |||||||||||||| ||||||| ||||| ||||||||||| ||||
Sbjct: 5 tactctctccgttttaaaataagtgtcttaagcttagtataattttatactagagctaga 64
Query: 77 ataacgttgagacacttatttt 98
| || ||| ||||| |||||||
Sbjct: 65 acaaagttaagacaattatttt 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 86 agacacttattttaagacggaaagagtataa 116
||||||||||||||| ||||| |||||||||
Sbjct: 32 agacacttattttaaaacggagagagtataa 2
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
|||||||||||||| ||||||||||||||||||||| || ||| || ||||| | || |
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagttaat 64
Query: 77 ataacgttgagacacttatttt 98
| || ||||||||| |||||||
Sbjct: 65 acaaagttgagacatttatttt 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||||||| ||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaa 71
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
||||||||||||| |||||||||||||||||| || || |||||| ||||| | ||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64
Query: 77 ataacgttgagacacttatttt 98
| || ||| |||||||||||||
Sbjct: 65 acaaagttaagacacttatttt 86
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtct 44
|||||||||||||| |||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtct 74
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 63.9 bits (32), Expect = 5e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 27 gtcctaaaataagtgtctcaagcttaatataactttatactagaactagtataacgttga 86
|||| ||||||| | |||||| |||| || |||||||||||||| |||| ||| |||||
Sbjct: 91 gtcccaaaataactttctcaaacttagtacaactttatactagagctagggtaaagttga 32
Query: 87 gacacttattttaagacgga 106
||||| |||||| |||||||
Sbjct: 31 gacacctattttgagacgga 12
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 19 ctccctccgtcctaaaataagtgtctcaagcttaatataactttatacta 68
|||||||||||| |||||||||||||||| ||| ||||||||| |||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttagtataactttgtacta 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||| ||||||||| ||||||||||||||||
Sbjct: 89 tacttcctccgtcccaaaataagtgtctcaa 59
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 60.0 bits (30), Expect = 8e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
|||||||||||| | ||||||||||||| ||| || || || ||| ||||||| |||||
Sbjct: 5 tactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagctagt 64
Query: 77 ataacgttgagacacttatttt 98
| || ||||||||| |||||||
Sbjct: 65 acaaagttgagacagttatttt 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||||||| ||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 60.0 bits (30), Expect = 8e-09
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
||||||||||||| ||||||| |||||||| ||| || |||||| ||||||| |||||
Sbjct: 5 tactccctccgtctcaaaataactgtctcaa-ctttgtacaactttgtactagagctagt 63
Query: 77 ataacgttgagacacttatttt 98
| || ||||||||| |||||||
Sbjct: 64 acaaagttgagacagttatttt 85
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtc 43
|||||||||||||||||||||||||||
Sbjct: 102 tactccctccgtcctaaaataagtgtc 76
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaagcttaatataactttatactagaactagt 76
||||||||||||| ||||||| ||||| || |||| ||||| |||||| || | |||||
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42
Query: 77 ataacgttgagacacttatttt 98
| || ||| ||||| |||||||
Sbjct: 41 acaaagttaagacagttatttt 20
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 21 ccctccgtcctaaaataagtgtctcaagcttaatataactttatac 66
|||||||||| ||||||||||||| ||||||| || || |||||||
Sbjct: 9 ccctccgtcccaaaataagtgtcttaagcttagtacaattttatac 54
>RF01058;MIR806;AACV01007528.1/40785-40545 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcctaaaataagtg 216
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 19 ctccctccgtcctaaaataagtgtctcaa 47
|||||||||||| ||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 32 aaaataagtgtctcaagcttaatataactttatactagaactagtataacgttgagacac 91
|||||||||||||||| || || |||||| || || | |||||| || ||||||||||
Sbjct: 86 aaaataagtgtctcaactctagtacaactttgtattaaagctagtacaaagttgagacac 27
Query: 92 ttatttt 98
|||||||
Sbjct: 26 ttatttt 20
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctc 45
|||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctc 33
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 19 ctccctccgtcctaaaataagtgtctcaagcttaatataacttt 62
|||||| ||||| |||||||||||||||| |||| || ||||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaaccttagtacaacttt 50
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaag 48
|||||||||||||| ||||||| |||||||||
Sbjct: 149 tactccctccgtcccaaaataactgtctcaag 118
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtct 44
|||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtct 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||| ||| ||||||||||||||||
Sbjct: 108 tactccctccatcccaaaataagtgtctcaa 78
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||||||| |||||||||| |||||
Sbjct: 112 tactccctccgtcccaaaataagtgactcaa 82
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||||||| |||||||||| |||||
Sbjct: 111 tactccctccgtcccaaaataagtgactcaa 81
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||||||| |||||||||| |||||
Sbjct: 100 tactccctccgtcccaaaataagtgactcaa 70
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtc 43
||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcttaaaataagtgtc 31
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtc 43
|||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtc 43
|||||||||||||| ||||||||||||
Sbjct: 102 tactccctccgtcccaaaataagtgtc 76
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgtctcaa 47
|||||||||||||| |||||||||| |||||
Sbjct: 5 tactccctccgtcccaaaataagtgactcaa 35
>RF00906;MIR1122;ABRL01001046.1/3877-3720 65489:Oryza barthii
Length = 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 ttactccctccgtcctaaaataa 38
|||||||||||||||||||||||
Sbjct: 4 ttactccctccgtcctaaaataa 26
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 attactccctccgtcctaaaata 37
|||||||||||||||||||||||
Sbjct: 3 attactccctccgtcctaaaata 25
>RF00906;MIR1122;AAAA02024971.1/2546-2390 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 attactccctccgtcctaaaata 37
|||||||||||||||||||||||
Sbjct: 3 attactccctccgtcctaaaata 25
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataagtgt 42
|||||||||||||| |||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtgt 27
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ttactccctccgtcctaaaataagtg 41
||||||||||||||| ||||||||||
Sbjct: 1 ttactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 ttactccctccgtcctaaaataagtg 41
||||||||||||||| ||||||||||
Sbjct: 241 ttactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ttactccctccgtcctaaaataagtg 41
||||||||||||||| ||||||||||
Sbjct: 1 ttactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 ttactccctccgtcctaaaataagtg 41
||||||||||||||| ||||||||||
Sbjct: 241 ttactccctccgtcccaaaataagtg 216
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataagtgtctca 46
|||||||||||| | |||||||||||||||
Sbjct: 130 tactccctccgttccaaaataagtgtctca 101
>RF00906;MIR1122;AP008213.1/16335065-16334954 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 14 tattactccctccgtcctaaaa 35
||||||||||||||||||||||
Sbjct: 111 tattactccctccgtcctaaaa 90
>RF00906;MIR1122;AAAA02007712.1/608-473 39946:Oryza sativa Indica
Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 ttactccctccgtcctaaaata 37
||||||||||||||||||||||
Sbjct: 133 ttactccctccgtcctaaaata 112
>RF00906;MIR1122;AACV01016108.1/6300-6411 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tattactccctccgtcctaaaa 35
||||||||||||||||||||||
Sbjct: 2 tattactccctccgtcctaaaa 23
>RF00906;MIR1122;AAAA02004745.1/3305-3414 39946:Oryza sativa Indica
Group
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 ttactccctccgtcctaaaata 37
||||||||||||||||||||||
Sbjct: 107 ttactccctccgtcctaaaata 86
>RF00906;MIR1122;AACV01013318.1/27232-27074 39947:Oryza sativa
Japonica Group
Length = 159
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 ttactccctccgtcctaaaata 37
||||||||||||||||||||||
Sbjct: 4 ttactccctccgtcctaaaata 25
>RF00906;MIR1122;AAAA02010499.1/21534-21382 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcctaaaataa 38
||||||||||||||||||||||
Sbjct: 149 tactccctccgtcctaaaataa 128
>RF00906;MIR1122;AP003508.3/31246-31125 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcctaaaataa 38
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcctaaaataa 26
