miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 87.7 bits (44), Expect = 2e-17
Identities = 70/76 (92%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 15 cgtaaactaatataagagcatttaaaa-attactttagtaatctaac-actcttatatta 72
|||||||||||||||||||||||| || | || ||||||||||||| ||||||||||||
Sbjct: 80 cgtaaactaatataagagcatttagaacactattttagtaatctaaatactcttatatta 21
Query: 73 gtttacagagggagta 88
||||||||||||||||
Sbjct: 20 gtttacagagggagta 5
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 85.7 bits (43), Expect = 9e-17
Identities = 69/75 (92%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 16 gtaaactaatataagagcatttaaaa-attactttagtaatctaa-cactcttatattag 73
|||||||||||||| |||||||| || | |||||||||||||||| | ||||||||||||
Sbjct: 79 gtaaactaatataaaagcatttagaacactactttagtaatctaaacgctcttatattag 20
Query: 74 tttacagagggagta 88
|||||||||||||||
Sbjct: 19 tttacagagggagta 5
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 79.8 bits (40), Expect = 6e-15
Identities = 75/84 (89%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagcatttaaaaattactttagtaatctaa-cactc 64
|||| ||||||||||||||||||| ||| |||| || | | |||||| |||||| |||||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttagaact-attttagttatctaaacactc 29
Query: 65 ttatattagtttacagagggagta 88
||||||||||||||||||||||||
Sbjct: 28 ttatattagtttacagagggagta 5
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 79.8 bits (40), Expect = 6e-15
Identities = 75/84 (89%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagcatttaaaaattactttagtaatctaa-cactc 64
|||| ||||||||||||||||||||||| |||| || | | |||||| |||||| ||||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttagaact-attttagttatctaaacactt 29
Query: 65 ttatattagtttacagagggagta 88
||||||||||||||||||||||||
Sbjct: 28 ttatattagtttacagagggagta 5
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 62 ctcttatattagtttacagagggagta 88
||||||||||||||||| |||||||||
Sbjct: 61 ctcttatattagtttacggagggagta 87
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 73.8 bits (37), Expect = 3e-13
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagcatttaaa-aattactttagtaatct-aacact 63
|||| |||| ||||||||||||||||||||||||| |||| |||| |||| ||||||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 64 cttatattagtttacagagggagta 88
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 tacttcctccgtaaactaatataagag 32
|||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtaaactaatataagag 31
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 62 ctcttatattagtttacagagggagta 88
||||||||||||||||| |||||||||
Sbjct: 63 ctcttatattagtttaccgagggagta 89
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 73.8 bits (37), Expect = 3e-13
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagcattta-aaaattactttagtaatct-aacact 63
|||| ||||||||||||||||||||||| |||| || | || |||||| |||| ||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 64 cttatattagtttacagagggagta 88
|||||||| ||||| ||||||||||
Sbjct: 29 cttatattggtttatagagggagta 5
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 62 ctcttatattagtttacagagggagta 88
||||||||||||||||| |||||||||
Sbjct: 63 ctcttatattagtttacggagggagta 89
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 71.9 bits (36), Expect = 1e-12
Identities = 68/76 (89%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 19 aactaatataagagcatttaaaa-attactttagtaatctaa-cactcttatattagttt 76
||||||||||||||| |||| | | ||||||||| |||||| | |||||||||||||||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 77 acagagggagtatttg 92
||||||||||||||||
Sbjct: 16 acagagggagtatttg 1
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 67.9 bits (34), Expect = 2e-11
Identities = 75/86 (87%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 5 ttacttcctccgtaaactaatataagagcatttaaaa-attactttagtaatctaaca-c 62
||||| ||||||||||||||||||||||| |||| | | || |||||| |||||| |
Sbjct: 90 ttactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgc 31
Query: 63 tcttatattagtttacagagggagta 88
||||||||||||||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
Score = 60.0 bits (30), Expect = 5e-09
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 5 ttacttcctccgtaaactaatataagagcattta-aaaattactttagtaatct-aacac 62
||||| |||| ||||||||||||||||||||||| | | || ||||||||| ||| |
Sbjct: 4 ttactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgc 63
Query: 63 tcttatattagtttacagagggagta 88
|||||||||||||||| |||||||||
Sbjct: 64 tcttatattagtttacggagggagta 89
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 67.9 bits (34), Expect = 2e-11
Identities = 75/86 (87%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 5 ttacttcctccgtaaactaatataagagcatttaaaa-attactttagtaatctaaca-c 62
||||| ||||||||||||||||||| | |||||||| |||| ||||||||| ||| |
Sbjct: 90 ttactccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgc 31
Query: 63 tcttatattagtttacagagggagta 88
| ||||||||||||||||||||||||
Sbjct: 30 ttttatattagtttacagagggagta 5
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 6 tacttcctccgtaaactaatataagagcatttaaa 40
|||| |||| |||||||||||||| ||||||||||
Sbjct: 5 tactccctctgtaaactaatataaaagcatttaaa 39
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 65.9 bits (33), Expect = 8e-11
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtaaactaatataagagcatttaaaa-attactttagtaatctaa-cact 63
|||| |||| |||||||||||||||||| ||| | | ||||||||| |||||| | ||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 64 cttatattagtttacagagggagta 88
|||||||||||||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
Score = 60.0 bits (30), Expect = 5e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 62 ctcttatattagtttacagagggagtattt 91
||||||||||||||||||||||||||||||
Sbjct: 31 ctcttatattagtttacagagggagtattt 2
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 65.9 bits (33), Expect = 8e-11
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagcattta-aaaattactttagtaatct-aacact 63
||||||||| ||||||||||||||||||||||| | | || |||||| | || ||| ||
Sbjct: 89 tacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgct 30
Query: 64 cttatattagtttacagagggagta 88
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 6 tacttcctccgtaaactaatataagagcattta 38
|||| ||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtaaactaatataagagcgttta 37
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 62 ctcttatattagtttacagagggagtatt 90
|||||||||||||||||||||| ||||||
Sbjct: 63 ctcttatattagtttacagaggaagtatt 91
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 65.9 bits (33), Expect = 8e-11
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagcattta-aaaattactttagtaatct-aacact 63
|||| ||||| |||||||||||||||||||||| || | ||||| |||||||| || |
Sbjct: 89 tactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgtt 30
Query: 64 cttatattagtttacagagggagta 88
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 4 tttacttcctccgtaaactaatataagagcattta 38
|||||| ||||||||||||||||||||| ||||||
Sbjct: 3 tttactccctccgtaaactaatataagaacattta 37
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 65.9 bits (33), Expect = 8e-11
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagcatttaaaa-attactttagtaatctaa-cact 63
|||| ||||||||||||||||||||||| |||| || | || |||| |||||| | ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 64 cttatattagtttacagagggagta 88
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 58.0 bits (29), Expect = 2e-08
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtaaactaatataagagcatttaaaa-attactttagtaatctaa-cact 63
|||| |||| |||||||||||||||||| |||| | | || ||||||| ||||| | ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 64 cttatattagtttacagagggagta 88
||||||||||||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 63.9 bits (32), Expect = 3e-10
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 16 gtaaactaatataagagcatttaaaa-attactttagtaatctaa-cactcttatattag 73
|||||||||||||| |||||||| | |||||||||||| ||||| | ||||||||||||
Sbjct: 79 gtaaactaatataaaagcatttagatcattactttagtattctaaacgctcttatattag 20
Query: 74 tttacagaggga 85
||||| ||||||
Sbjct: 19 tttacggaggga 8
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 cctccgtaaactaatataagagcattta 38
||||||||||||||||||||||| ||||
Sbjct: 10 cctccgtaaactaatataagagcgttta 37
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 58 aacactcttatattagtttacagagggagta 88
|||||||||||||||||||||||||||||||
Sbjct: 35 aacactcttatattagtttacagagggagta 5
Score = 52.0 bits (26), Expect = 1e-06
Identities = 73/86 (84%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtaaactaatataagagcatttaaaa-attactttagtaatctaaca-ct 63
|||| |||| ||||||||||||||||| |||| | | || ||||||||| ||| | ||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 64 cttatattagtttacagagggagtat 89
|||||||||||||||||||||||||
Sbjct: 65 tttatattagtttacagagggagtat 90
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 58 aacactcttatattagtttacagagggagta 88
|||||||||||||||||||||||||||||||
Sbjct: 35 aacactcttatattagtttacagagggagta 5
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 62 ctcttatattagtttacagagggagta 88
||||||||||||||||| |||||||||
Sbjct: 48 ctcttatattagtttaccgagggagta 74
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 60.0 bits (30), Expect = 5e-09
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 44 tactttagtaatctaaca-ctcttatattagtttacagagggagta 88
||||||||| |||||| | |||||||||||||||||||||||||||
Sbjct: 50 tactttagtgatctaaaagctcttatattagtttacagagggagta 5
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 49 tagtaatctaa-cactcttatattagtttacagagggagta 88
||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 45 tagtaatctaaacactcttatattagtttacggagggagta 5
Score = 52.0 bits (26), Expect = 1e-06
Identities = 73/86 (84%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 5 ttacttcctccgtaaactaatataagagcattta-aaaattactttagtaatct-aacac 62
||||| |||||||||||||||||||||| |||| | | ||||||||| |||| ||
Sbjct: 4 ttactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgt 63
Query: 63 tcttatattagtttacagagggagta 88
| ||||||||||||||||||||||||
Sbjct: 64 ttttatattagtttacagagggagta 89
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 62 ctcttatattagtttacagagggagtatt 90
|||||||||||||||||||||||||||||
Sbjct: 31 ctcttatattagtttacagagggagtatt 3
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagc 33
|||| |||||||||||||||||||||||
Sbjct: 62 tactccctccgtaaactaatataagagc 35
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 62 ctcttatattagtttacagagggagta 88
||||||||||||||||| |||||||||
Sbjct: 36 ctcttatattagtttacggagggagta 62
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagcattta 38
|||| ||||||||||||||||||||||||||||
Sbjct: 134 tactccctccgtaaactaatataagagcattta 102
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 62 ctcttatattagtttacagagggagta 88
|||||||||||||||||||||||||||
Sbjct: 31 ctcttatattagtttacagagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 62 ctcttatattagtttacagagggagtat 89
||||||||||||||||| ||||||||||
Sbjct: 108 ctcttatattagtttacggagggagtat 135
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagcattta 38
|||| ||||||||||||||||||||||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcattta 55
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 62 ctcttatattagtttacagagggagta 88
||||||||||||||||| |||||||||
Sbjct: 61 ctcttatattagtttacggagggagta 87
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgtaaactaatataagagcattta-aaaattactttagtaatct-aacact 63
|||| |||||||||| |||||||||||| |||| | | ||||||||| |||| ||| ||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 64 cttatattagtttacagagggagta 88
|||||| ||||||||||| ||||||
Sbjct: 65 cttatagtagtttacagacggagta 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 49 tagtaatctaa-cactcttatattagtttacagagggagtat 89
||||||||||| | ||||||||||| ||||| ||||||||||
Sbjct: 45 tagtaatctaaacgctcttatattaatttacggagggagtat 4
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 56.0 bits (28), Expect = 8e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 62 ctcttatattagtttacagagggagtat 89
||||||||||||||||||||||||||||
Sbjct: 31 ctcttatattagtttacagagggagtat 4
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 6 tacttcctccgtaaactaatataagagcatt 36
|||| |||| |||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcatt 35
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 56.0 bits (28), Expect = 8e-08
Identities = 69/80 (86%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 11 cctccgtaaactaatataagagcattta-aaaattactttagtaat-ctaacactcttat 68
||||||||||||||||||||||| |||| | | || |||||| || | ||| |||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 69 attagtttacagagggagta 88
|||| |||||||||||||||
Sbjct: 24 attaatttacagagggagta 5
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 62 ctcttatattagtttacagagggagta 88
|||||||||||||||||||||||||||
Sbjct: 70 ctcttatattagtttacagagggagta 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 cctccgtaaactaatataagagcattta 38
|||| |||||||||||||||||||||||
Sbjct: 10 cctctgtaaactaatataagagcattta 37
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 62 ctcttatattagtttacagaggg 84
|||||||||||||||||||||||
Sbjct: 31 ctcttatattagtttacagaggg 9
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 54.0 bits (27), Expect = 3e-07
Identities = 74/87 (85%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagcatttaaaa-attactttagtaatctaaca-ct 63
|||| ||||| |||||||||||||||||||||| | |||| |||| |||||| ||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 64 cttatattagtttacagagggagtatt 90
||||||||||||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagtatt 3
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 62 ctcttatattagtttacagagggagta 88
|||||||||||||||||||||||||||
Sbjct: 62 ctcttatattagtttacagagggagta 88
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagcattta 38
|||| |||| |||||||||||||||||||||||
Sbjct: 88 tactccctctgtaaactaatataagagcattta 56
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 6 tacttcctccgtaaactaatataagagcatttaaaa-attactttagtaatctaacac-t 63
|||| |||| |||||||||||||||| | |||| | | ||||||||| |||||| | |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 64 cttatattagtttacagaggga 85
||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagaggga 8
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 tcttatattagtttacagagggagta 88
||||||||||||||||||||||||||
Sbjct: 64 tcttatattagtttacagagggagta 89
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 tcttatattagtttacagagggagta 88
||||||||||||||||||||||||||
Sbjct: 64 tcttatattagtttacagagggagta 89
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 tcttatattagtttacagagggagta 88
||||||||||||||||||||||||||
Sbjct: 66 tcttatattagtttacagagggagta 91
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 63 tcttatattagtttacagaggga 85
|||||||||||||||||||||||
Sbjct: 30 tcttatattagtttacagaggga 8
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 58 aacactcttatattagtttacagagggagta 88
||||||||||||||| ||||| |||||||||
Sbjct: 35 aacactcttatattaatttacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 62 ctcttatattagtttacagagggagt 87
||||||||||||||||| ||||||||
Sbjct: 63 ctcttatattagtttactgagggagt 88
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 58 aacactcttatattagtttacagagggagta 88
|||||||||||||| |||||||||||||||
Sbjct: 57 aacactcttatatttctttacagagggagta 87
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 62 ctcttatattagtttacagagggagt 87
||||||||||||||||| ||||||||
Sbjct: 63 ctcttatattagtttacggagggagt 88
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 cctccgtaaactaatataagag 32
||||||||||||||||||||||
Sbjct: 84 cctccgtaaactaatataagag 63
