miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 99.6 bits (50), Expect = 8e-21
Identities = 77/85 (90%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| |||||||||||||||||||||||||| |||| |||| |||| |||||||| |
Sbjct: 5 tactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgct 62
Query: 76 cttatattagtttacgaagggagta 100
|||||||||||||||| ||||||||
Sbjct: 63 cttatattagtttacggagggagta 87
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| || ||||||||||||||||| ||||| | | |||| ||||||||||||||||
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 76 cttatattagtttacgaagggagta 100
||||||||||||||| ||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
Score = 50.1 bits (25), Expect = 6e-06
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| ||||||||||||||||| | ||||| || | || |||| |||||||| |
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 76 cttatattagtttacgaagggagta 100
||||||||||||||| ||||||||
Sbjct: 29 tttatattagtttacggagggagta 5
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| ||||||||||||||||||||| |||| || | |||| ||||||||||||| |
Sbjct: 89 tactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacact 30
Query: 76 cttatattagtttacgaagggagta 100
||||||||||||||| ||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgttta 48
|||||| ||||||||||||||||| ||||||||
Sbjct: 5 tactccctctgtaaactaatataagagtgttta 37
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 89.7 bits (45), Expect = 7e-18
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| ||||||||||||||||| || ||||| || | ||||||||||||||||||| |
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 76 cttatattagtttacgaagggagta 100
|||||||||||| || |||||||||
Sbjct: 65 cttatattagttcac-aagggagta 88
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 60 tagtgatctaaacgttcttatattagtttacgaagggagta 100
|||||||||||||| |||||||||||||||| ||||||||
Sbjct: 45 tagtgatctaaacgctcttatattagtttacagagggagta 5
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| ||| ||||| ||||||| |||||||| || | |||| ||||| |||||||| |
Sbjct: 5 tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64
Query: 76 cttatattagtttacgaagggagtagt 102
|||||||||||||||| ||||||||||
Sbjct: 65 cttatattagtttacggagggagtagt 91
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 15 ctactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgt 74
||||||| ||||||||||||||||| || | ||| || | |||||||||||||||| ||
Sbjct: 90 ctactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgc 31
Query: 75 tcttatattagtttacgaagggagta 100
|||||||||||||||| ||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| ||||||||||||||||| || | ||| || | || ||||||||||| || |
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 76 cttatattagtttacgaagggagtag 101
||||||||||||||| |||||||||
Sbjct: 65 cttatattagtttacagagggagtag 90
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| ||||||||||||||||| |||||||| |||| |||| |||| |||||||| |
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaacgct 62
Query: 76 cttatattagtttacgaagggagta 100
||||||||||||||| ||||||||
Sbjct: 63 attatattagtttacggagggagta 87
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| ||||||||||||||||| ||| |||| || | |||| ||||| |||||| | |
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64
Query: 76 cttatattagtttacgaaggga 97
||||||||||||||||||||||
Sbjct: 65 cttatattagtttacgaaggga 86
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 15 ctactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgt 74
||||||| ||||||||||| ||||| || ||||| || | ||||||||| |||||||||
Sbjct: 90 ctactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgc 31
Query: 75 tcttatattagtttacgaagggagta 100
|||||||||| |||||| ||||||||
Sbjct: 30 tcttatattaatttacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 60 tagtgatctaaacgttcttatattagtttac 90
|||||||||||||| ||||||| ||||||||
Sbjct: 49 tagtgatctaaacgctcttatagtagtttac 79
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| ||||||||||||||||||| |||| || | ||||||||| |||||||| |
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 76 cttatattagtttacgaagggagta 100
|||||||||||||||| ||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| || |||||||||||||| |||||||| || | || |||||||||||| |||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 76 cttatattagtttacgaagggagta 100
|||||||||||||| ||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| ||||||||||||||||| || |||| || | |||| |||| ||||||||| |
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 76 cttatattagtttacgaagggagta 100
|||||||||||||||| ||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 58.0 bits (29), Expect = 3e-08
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| || |||||||||||||| || ||||| || | || |||||||||||| | |
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 76 cttatattagtttacgaagggagta 100
||||||||||||||| ||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 79.8 bits (40), Expect = 7e-15
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 14 actactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacg 73
|||||||| || |||||||||||||| || |||| || | |||| |||||||||||||
Sbjct: 91 actactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaaca 32
Query: 74 ttcttatattagtttacgaagggagtag 101
||||||||||||||||| |||||||||
Sbjct: 31 ctcttatattagtttacggagggagtag 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 15 ctactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgt 74
||||||| || |||||||||||||| |||||||| || | || || |||| |||| |
Sbjct: 4 ctactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgc 63
Query: 75 tcttatattagtttacgaagggagtagt 102
|||||||||||||||| ||||||||||
Sbjct: 64 tcttatattagtttaccgagggagtagt 91
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 79.8 bits (40), Expect = 7e-15
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 23 tctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgttcttatat 82
|||||||||||||||||||| |||| || | ||| ||||||||||||| | ||||||||
Sbjct: 11 tctgtaaactaatataaaagcatttagatcactaa-gtagtgatctaaatgctcttatat 69
Query: 83 tagtttacgaagggagtagt 102
||||||||| ||||||||||
Sbjct: 70 tagtttacggagggagtagt 89
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 77.8 bits (39), Expect = 3e-14
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 14 actactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacg 73
|||||||| || |||||||||||||| || ||||| | | |||| ||||||||||||||
Sbjct: 91 actactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacg 32
Query: 74 ttcttatattagtttacgaagggagta 100
|||||||||||||||| ||||||||
Sbjct: 31 ctcttatattagtttacagagggagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| ||||||||||||||||| || ||||| || | || |||| |||||||| |
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 76 cttatattagtttacgaagggagtagt 102
|||||||||||||||| ||||||||||
Sbjct: 65 cttatattagtttacggagggagtagt 91
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 13 tactactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaac 72
||||||||| ||||||||||||||||| || ||||| || | |||||||||| ||||||
Sbjct: 2 tactactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaat 61
Query: 73 gttcttatattagtttac 90
| | ||||||||||||||
Sbjct: 62 gcttttatattagtttac 79
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 60 tagtgatctaaacgttcttatattagtttacgaagggagtagt 102
|||| ||||||||| |||||||||||||||| ||||||||||
Sbjct: 45 tagtaatctaaacgctcttatattagtttacagagggagtagt 3
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 15 ctactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgt 74
||||||| |||||||| |||||||| || |||| || | |||| ||||||||||||||
Sbjct: 4 ctactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgc 63
Query: 75 tcttatattagtttacg 91
|||||||||||||||||
Sbjct: 64 tcttatattagtttacg 80
Score = 48.1 bits (24), Expect = 2e-05
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 26 gtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgttcttatattag 85
|||||||||||||| || ||||| || | || |||||||| ||||| ||||||||||
Sbjct: 79 gtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttatattaa 20
Query: 86 tttacgaagggagtag 101
||||| |||||||||
Sbjct: 19 tttacagagggagtag 4
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 23 tctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgttcttatat 82
||||||||||||||||| | |||| || | ||||||||||||||||| | ||||||||
Sbjct: 12 tctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttatat 71
Query: 83 tagtttacgaagggagta 100
|||||||| ||||||||
Sbjct: 72 tagtttacagagggagta 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tagtgatctaaacgttcttatattagtttac 90
|||||||||||| | ||||||||||||||||
Sbjct: 45 tagtgatctaaaaggtcttatattagtttac 15
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 67.9 bits (34), Expect = 3e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 27 taaactaatataaaagtgtttacataagtaaagtagtgatctaaacgttcttatattagt 86
|||||||||||||||| ||||| || | ||| ||||||||||||| | ||||||||||||
Sbjct: 16 taaactaatataaaagcgtttagatcattaa-gtagtgatctaaatgctcttatattagt 74
Query: 87 ttacgaagggagta 100
|||| ||||||||
Sbjct: 75 ttacagagggagta 88
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 63 tgatctaaacgttcttatattagtttacgaagggagtagt 102
||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 42 tgatctaaacgcttttatattagtttatgaagggagtagt 3
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 63.9 bits (32), Expect = 4e-10
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 17 actccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgttc 76
||||| || |||||||||||||| || ||||| || | |||| |||||||| |||| ||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 77 ttatattagtttacgaagggagta 100
|||||||| |||||| ||||||||
Sbjct: 28 ttatattaatttacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 60 tagtgatctaaacgttcttatattagtttacgaagggagt 99
|||||||||||||| |||||||||||||||| |||||||
Sbjct: 49 tagtgatctaaacgctcttatattagtttactgagggagt 88
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 26 gtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgttcttatattag 85
|||||||||||||| || ||||| | | ||||||| ||||||||| | | |||||||||
Sbjct: 15 gtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgcttttatattag 74
Query: 86 tttacgaagggagta 100
||||| |||||||||
Sbjct: 75 tttacaaagggagta 89
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| | |||||||||||||||||| |||| || | || |||| |||||||| |
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 76 cttatattagtttacgaaggga 97
|||||||||||||||| |||||
Sbjct: 29 cttatattagtttacggaggga 8
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| || |||||||||||||| || ||||| | | |||| |||||||||||| | |
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 76 cttatattagtttac 90
|||||||||||||||
Sbjct: 65 cttatattagtttac 79
Score = 60.0 bits (30), Expect = 7e-09
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 23 tctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgttcttatat 82
||||||||||||||||| || |||| || | || |||||| ||||||| ||||||||
Sbjct: 82 tctgtaaactaatataagagcatttagatcactattttagtgacctaaacgctcttatat 23
Query: 83 tagtttacgaagggagta 100
||||||||| ||||||||
Sbjct: 22 tagtttacggagggagta 5
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 25 tgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgttcttatatta 84
||||||||||||||| || ||| | || | |||| | ||||||||||| ||||||||||
Sbjct: 14 tgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctcttatatta 73
Query: 85 gtttacgaagggagt 99
||||||| |||||||
Sbjct: 74 gtttacggagggagt 88
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 63 tgatctaaacgttcttatattagtttacgaagggagtagt 102
|||||| |||| |||||||||||||||| |||||| ||||
Sbjct: 42 tgatctcaacgctcttatattagtttacaaagggaatagt 3
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| || |||||||||||||| || |||| || | |||| |||||||||||||| |
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgct 75
Query: 76 cttatattagt 86
|||||||||||
Sbjct: 74 cttatattagt 64
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 63 tgatctaaacgttcttatattagtttacgaagggagta 100
||||||||| | ||||||||||||||||| ||||||||
Sbjct: 97 tgatctaaatgctcttatattagtttacggagggagta 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 67 ctaaacgttcttatattagtttacgaagggagta 100
||||||| |||||||||||||||| ||||||||
Sbjct: 38 ctaaacgctcttatattagtttacagagggagta 5
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 33 aatataaaagtgtttacataagtaaagtagtgatctaaacgttcttatattagtttac 90
||||||| ||||| || || | ||||||||||||||||||| ||||||||| ||||||
Sbjct: 72 aatataagagtgtctagatcactaaagtagtgatctaaacgctcttatatttgtttac 15
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaa 71
|||||| ||||||||||||||||| || |||| || | |||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaa 60
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 60 tagtgatctaaacgttcttatattagtttacgaagggagta 100
|||||||||||| | |||||||||||||||| ||||||||
Sbjct: 45 tagtgatctaaaagctcttatattagtttacagagggagta 5
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 65 atctaaacgttcttatattagtttacgaagggagta 100
||||||| ||||||||||||||||||| ||||||||
Sbjct: 40 atctaaatgttcttatattagtttacggagggagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| || |||||||||||||| | |||| || | | |||||||| |||||| | |
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 76 cttatattagtttacgaagggagta 100
|||||||||||||| | ||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 12 ttactactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaa 71
|||||||| | |||||||| ||||||| || ||||| || | | |||||||||||||||
Sbjct: 1 ttactactacctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaa 60
Query: 72 cgttcttatatt 83
|| |||||||||
Sbjct: 61 cgctcttatatt 72
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 58 agtagtgatctaaacgttcttatattagtttacgaagggagta 100
|||||||||||||| | |||||||||||||||| ||||||||
Sbjct: 49 agtagtgatctaaaaggtcttatattagtttacagagggagta 91
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tagtgatctaaacgttcttatattagtttac 90
|||||||||||| | ||||||||||||||||
Sbjct: 45 tagtgatctaaaaggtcttatattagtttac 15
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 55 taaagtagtgatctaaacgttcttatattagtttacgaagggagta 100
|||||||||||||| || | |||||||||||||||| ||||||||
Sbjct: 50 taaagtagtgatctgaatgctcttatattagtttacagagggagta 5
>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
subsp. dicoccoides
Length = 96
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 58 agtagtgatctaaacgttcttatatt 83
||||||||||||||||||||||||||
Sbjct: 47 agtagtgatctaaacgttcttatatt 22
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 27 taaactaatataaaagtgtttacataagtaaagtagtgatctaaacgttcttatattagt 86
||||||||||||| || |||| || | |||| |||||||||||| | | ||||||||||
Sbjct: 78 taaactaatataagagcatttagattattaaaatagtgatctaaatgcttttatattagt 19
Query: 87 ttacgaagggagta 100
|||| ||||||||
Sbjct: 18 ttacagagggagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| |||||||||||||||||||| |||| || | || || | ||||||| | |
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64
Query: 76 cttatattagtttacgaagggagta 100
|||||||||||||| | ||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 60 tagtgatctaaacgttcttatattagtttacgaagggagta 100
|||||||||||||| |||||||||| ||||| ||||||||
Sbjct: 52 tagtgatctaaacgctcttatattattttacatagggagta 92
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 50.1 bits (25), Expect = 6e-06
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| |||||||||||||||||||| |||| || | |||| || || | |||| |
Sbjct: 5 tactccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataat 64
Query: 76 cttatattagtttacgaagggagta 100
||||||||||||||| ||||||||
Sbjct: 65 tttatattagtttacggagggagta 89
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 50.1 bits (25), Expect = 6e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 40 aagtgtttacataagtaaagtagtgatctaaacgttcttatattagtttacgaagggagt 99
||||||||| || | |||||||||||||||||| ||||||||| ||||| |||||||
Sbjct: 27 aagtgtttagatcactaaagtagtgatctaaacactcttatatttctttacagagggagt 86
Query: 100 a 100
|
Sbjct: 87 a 87
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgttt 47
|||||| ||||||||||||||||| |||||||
Sbjct: 5 tactccctctgtaaactaatataagagtgttt 36
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
|||||| ||||||||| ||||||| | ||||| || |||| |||||||||||||| |
Sbjct: 5 tactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgct 64
Query: 76 cttatatt 83
||||||||
Sbjct: 65 cttatatt 72
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tagtgatctaaacgttcttatattagtttac 90
|||||||||||| | ||||||||||||||||
Sbjct: 45 tagtgatctaaatgctcttatattagtttac 15
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 tcttatattagtttacgaagggagtag 101
||||||||||||||||| |||||||||
Sbjct: 37 tcttatattagtttacggagggagtag 63
