miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 113 bits (57), Expect = 6e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| || |
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 82 cttatatttgtttacagagggagta 106
|||||||| ||||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
Score = 93.7 bits (47), Expect = 5e-19
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 21 ctactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgt 80
|||||||||| |||||||||||||||||| ||| ||||||| ||||||||||| ||
Sbjct: 90 ctactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgc 31
Query: 81 tcttatatttgtttacagagggagtat 107
||||||||| |||||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagtat 4
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 113 bits (57), Expect = 6e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| | |
Sbjct: 5 tactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgct 64
Query: 82 cttatatttgtttacagagggagta 106
||||||||| ||||| |||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||||||||| |||||||||||||||| ||||||| ||||||||| || | |
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 82 cttatatttgtttacagagggagtat 107
|||||||| |||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagtat 4
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 113 bits (57), Expect = 6e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||||||||||||||||||||| |||| || ||||||||||||||||||| |||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 82 cttatatttgtttacagagggagta 106
||||||| ||||||||||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
Score = 73.8 bits (37), Expect = 5e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| |||||||||||||| | |||||| ||||||| |||| |||||||| |
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 82 cttatatttgtttacagagggagta 106
|||||||| |||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 113 bits (57), Expect = 6e-25
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
|||||||||||||||||||||||||||| |||| || |||| |||||||||||||| | |
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 82 cttatatttgtttacagagggagta 106
|||||||| ||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 97.6 bits (49), Expect = 3e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| ||||||||||||||||||||||| ||||||| |||| ||||||||| |
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 82 cttatatttgtttacagagggagta 106
|||||||| |||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 113 bits (57), Expect = 6e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 35 aactaatataagagcatttatatcactactttagtgatctaaacgttcttatatttgttt 94
||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| ||||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 95 acagagggagtat 107
|||||||||||||
Sbjct: 16 acagagggagtat 4
Score = 81.8 bits (41), Expect = 2e-15
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||| |
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 82 cttatatttgtttacagagggagta 106
|||||||| ||| ||| ||||||||
Sbjct: 65 cttatattagttcaca-agggagta 88
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 111 bits (56), Expect = 2e-24
Identities = 80/88 (90%)
Strand = Plus / Minus
Query: 19 aactactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaac 78
||||||||||||||||||||||||||||||| |||| | ||||| |||||||||||||||
Sbjct: 92 aactactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaac 33
Query: 79 gttcttatatttgtttacagagggagta 106
||||||||| ||||| ||||||||||
Sbjct: 32 actcttatattggtttatagagggagta 5
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 109 bits (55), Expect = 9e-24
Identities = 77/83 (92%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 19 aactactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaac 78
|||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 90 aactactccctccgtaaactaatataagagcatttagatcactac-ttagtgatctaaat 32
Query: 79 gttcttatatttgtttacagagg 101
| | ||||||| |||||||||||
Sbjct: 31 gcttttatattagtttacagagg 9
Score = 71.9 bits (36), Expect = 2e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 27 cctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgttcttat 86
|||| |||||||||||||| |||||||| ||||||| | ||||||||||| | ||||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcactaagt-agtgatctaaatgctcttat 67
Query: 87 atttgtttacagagggagta 106
||| |||||| |||||||||
Sbjct: 68 attagtttacggagggagta 87
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 107 bits (54), Expect = 4e-23
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| |||||||||||||||| | |||| |||||||||||||||||||||| | |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 82 cttatatttgtttacagaggga 103
|||||||| |||||||||||||
Sbjct: 29 cttatattagtttacagaggga 8
Score = 83.8 bits (42), Expect = 5e-16
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 25 tccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgttctt 84
|||||| |||||||||||||||| | |||| ||||||| |||||||||||| | ||||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67
Query: 85 atatttgtttacagagggagta 106
||||| ||||||||||||||||
Sbjct: 68 atattagtttacagagggagta 89
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
|||| |||| ||||||||||||||||||||||| ||||||| |||||||| ||||||| |
Sbjct: 89 tacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgct 30
Query: 82 cttatatttgtttacagagggagta 106
|||||||| |||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
|||||||||||||||||||||||||||| |||| |||||| |||||||||||| | |
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 82 cttatatttgtttacagagggagtat 107
|||||||| ||||||||||| |||||
Sbjct: 65 cttatattagtttacagaggaagtat 90
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||| | |||||||||||||| |||||||| | |||||||||||| ||||||||| |
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30
Query: 82 cttatatttgtttacagagggagta 106
|||||||| ||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 69.9 bits (35), Expect = 8e-12
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 20 actactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacg 79
||||||||||| |||||||||||||||||| |||| || |||| ||||| |||||| |
Sbjct: 3 actactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatg 62
Query: 80 ttcttatatttgtttacagagggagta 106
| ||||||| |||||||| |||||||
Sbjct: 63 cttttatattagtttacagggggagta 89
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
|||||||||| |||||||||||||||||||||| | |||||||| ||| ||||||| |||
Sbjct: 89 tactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgtt 30
Query: 82 cttatatttgtttacagagggagta 106
|||||||| |||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
|||||||||||||||||||||||||| |||||| || ||| ||||| |||||| | |
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 82 cttatatttgtttacagagggagtat 107
|||||||| ||||| ||||||||||
Sbjct: 65 cttatattagtttatggagggagtat 90
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 18 aaactactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaa 77
|||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||
Sbjct: 93 aaactactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaa 34
Query: 78 cgttcttatatttgtttacagagggagta 106
|| ||||||||| ||||||||||||||||
Sbjct: 33 cgctcttatattagtttacagagggagta 5
Score = 97.6 bits (49), Expect = 3e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| |||||||||||||||||| |||| ||||||| |||||| |||||||| |
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 82 cttatatttgtttacagagggagta 106
|||||||| |||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||||||||| |||||||||||| |||| || ||||||||||||||||||||| |
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 82 cttatatttgtttacagagggagta 106
|||||| | ||||||||| ||||||
Sbjct: 65 cttatagtagtttacagacggagta 89
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 103 bits (52), Expect = 5e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 27 cctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgttcttat 86
||||||||||||||||||||||| |||| ||||||| |||||||||| ||||| ||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 87 atttgtttacagagggagta 106
||| |||||||||||||||
Sbjct: 24 attaatttacagagggagta 5
Score = 73.8 bits (37), Expect = 5e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 21 ctactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgt 80
|||||||||| ||||| |||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 4 ctactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgc 63
Query: 81 tcttatatttgtttacagagg 101
||||||||| |||||| ||||
Sbjct: 64 tcttatattagtttacggagg 84
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 97.6 bits (49), Expect = 3e-20
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 18 aaactactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaa 77
||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 93 aaactactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaa 34
Query: 78 cgttcttatatttgtttacagagggagta 106
| ||||||||| |||||| |||||||||
Sbjct: 33 cactcttatattagtttacggagggagta 5
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 21 ctactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgt 80
|||||||||||||||||||||||||||| |||| ||||||| |||| |||| |||| |
Sbjct: 4 ctactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgc 63
Query: 81 tcttatatttgtttacagagggagta 106
||||||||| |||||| |||||||||
Sbjct: 64 tcttatattagtttaccgagggagta 89
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 97.6 bits (49), Expect = 3e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
|||||||||||||||||||||||| ||| |||| | |||| ||||||||||||||||
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 82 cttatatttgtttacagagggagta 106
|||||||| ||||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| |||||||||||||||| | |||| ||||||| |||||| |||||||| |
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 82 cttatatttgtttacagagggagta 106
||||||| |||||| |||||||||
Sbjct: 29 tttatattagtttacggagggagta 5
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||| |
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 82 cttatatttgtttacagagggagt 105
|||||||| |||||| ||||||||
Sbjct: 65 cttatattagtttactgagggagt 88
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 23 actccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgttc 82
|||||||| |||||||||||||||||| |||| ||||||| |||||||| |||| ||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 83 ttatatttgtttacagagggagta 106
||||||| ||||| |||||||||
Sbjct: 28 ttatattaatttacggagggagta 5
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 78/88 (88%)
Strand = Plus / Minus
Query: 19 aactactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaac 78
|||||||||||||||||| |||||||||| |||| || ||||||||||||||||| ||
Sbjct: 92 aactactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagac 33
Query: 79 gttcttatatttgtttacagagggagta 106
| |||||||||| |||||||| ||||||
Sbjct: 32 gctcttatatttctttacagaaggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
|||||| || ||||| ||||||||||| | || ||||||| |||| |||||||| |
Sbjct: 5 tactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacact 64
Query: 82 cttatatttgtttacagagggagta 106
||||||||| ||||| |||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 25 tccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgttctt 84
||||| |||||||||||||||||||||||| | ||||| |||||| ||||||| ||||
Sbjct: 86 tcccttcgtaaactaatataagagcatttagaacactattttagtaatctaaatactctt 27
Query: 85 atatttgtttacagagggagta 106
||||| ||||||||||||||||
Sbjct: 26 atattagtttacagagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| ||||||||||||||||| ||||| || |||| ||||| |||||| | |
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64
Query: 82 cttatatttgtttac 96
|||||||| ||||||
Sbjct: 65 cttatattagtttac 79
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 25 tccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgttctt 84
|||||| ||||| ||||||||||| |||| ||||||| ||||| |||||||||| |||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 85 atatttgtttacagagggagta 106
||||||||||||||||||||||
Sbjct: 26 atatttgtttacagagggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| |||||| |||||||| || |||| ||| ||| |||||||||||||| |
Sbjct: 5 tactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgct 64
Query: 82 cttatatttgtttacagaggga 103
||||||||| ||||| ||||||
Sbjct: 65 cttatatttctttactgaggga 86
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 89.7 bits (45), Expect = 8e-18
Identities = 75/84 (89%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactact--ttagtgatctaaacg 79
||||||||| |||||||||||||||| | |||| ||||||||| ||||||||||||| |
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaag 32
Query: 80 ttcttatatttgtttacagaggga 103
||||||||| |||||||||||||
Sbjct: 31 gtcttatattagtttacagaggga 8
Score = 73.8 bits (37), Expect = 5e-13
Identities = 73/84 (86%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 25 tccctccgtaaactaatataagagcatttatatcactactt--tagtgatctaaacgttc 82
|||||| |||||||||||||||| | |||| ||||||| | |||||||||||| | ||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtc 67
Query: 83 ttatatttgtttacagagggagta 106
||||||| ||||||||||||||||
Sbjct: 68 ttatattagtttacagagggagta 91
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 89.7 bits (45), Expect = 8e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| |||| |||||||||||||||| || |||||||||||| |||||||| |
Sbjct: 89 tactccctctataaagaaatataagagcatttagataactactttagtgctctaaacgct 30
Query: 82 cttatatttgtttacagagggagta 106
||||||||| ||||| |||||||||
Sbjct: 29 cttatatttctttaccgagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| ||||| ||||||||||| |||| | ||||| |||| ||||||| | |
Sbjct: 5 tactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatgct 64
Query: 82 cttatatttgtttacagagggagta 106
||||||||| |||| ||||||||||
Sbjct: 65 cttatatttctttatagagggagta 89
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 89.7 bits (45), Expect = 8e-18
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 26 ccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgttctta 85
||||| ||||| ||||||||||| |||| |||||||||| ||||||||||||| |||||
Sbjct: 85 ccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacgctctta 26
Query: 86 tatttgtttacagagggagta 106
||||| |||||||||| ||||
Sbjct: 25 tatttctttacagaggtagta 5
Score = 73.8 bits (37), Expect = 5e-13
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 20 actactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacg 79
|||||| |||| ||||| ||||||||||| |||| |||||| ||||||||||||||
Sbjct: 3 actactacctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacg 62
Query: 80 ttcttatatttgtttacagagggagtata 108
|||||||||| ||||||||||| |||||
Sbjct: 63 ctcttatatttctttacagagggtgtata 91
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 89.7 bits (45), Expect = 8e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| ||||| ||||||||| |||||| || |||||||||||||||||||| ||
Sbjct: 89 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 30
Query: 82 cttatatttgtttacagagggagta 106
||||||||| | ||| |||||||||
Sbjct: 29 cttatatttctgtacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||||||| | ||||||||| |||| ||||||| |||| ||||||| | |
Sbjct: 5 tactccctccgtacagaaatataagaatgtttagatcactaaagtagttatctaaatgat 64
Query: 82 cttatatttgtttacagagggagta 106
||||||||| |||||||||||||||
Sbjct: 65 cttatatttctttacagagggagta 89
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||||||||||||||||||||||||||| |||| || |||||||||||||| |
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgct 75
Query: 82 cttatatt 89
||||||||
Sbjct: 74 cttatatt 67
Score = 79.8 bits (40), Expect = 8e-15
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 36 actaatataagagcatttatatcactactttagtgatctaaacgttcttatatttgttta 95
|||||||||||||| |||| ||||||| |||| ||||||||| | ||||||||| |||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 96 cagagggagtat 107
| ||||||||||
Sbjct: 124 cggagggagtat 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 73 ctaaacgttcttatatttgtttacagagggagta 106
||||||| ||||||||| ||||||||||||||||
Sbjct: 38 ctaaacgctcttatattagtttacagagggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcattta 54
||||||||| |||||||||||||||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagcgttta 37
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 85.7 bits (43), Expect = 1e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||||||||| ||||||||||| |||| ||||||||| |||||||| |||| |
Sbjct: 5 tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 64
Query: 82 cttatatttgtttac 96
|||||||||||||||
Sbjct: 65 cttatatttgtttac 79
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 32 gtaaactaatataagagcatttatatcactactttagtgatctaaacgttcttatatttg 91
|||||| ||||||||||| || | |||||| |||||| ||||||| ||||||||||
Sbjct: 79 gtaaacaaatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttc 20
Query: 92 tttacagagggagtat 107
||||| ||||||||||
Sbjct: 19 tttacggagggagtat 4
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
|||||||| |||||||||||||| |||||||| |||| ||||||||| |||||||| |
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 82 cttatatttgtttacagaggga 103
|||||||| |||||| ||||||
Sbjct: 29 cttatattagtttacggaggga 8
Score = 60.0 bits (30), Expect = 7e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 25 tccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgttctt 84
||||||||||||||||||||||||| |||| | |||| || ||||||||| | | ||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 85 atatttgtttacagagggagta 106
||||| ||||||| ||||||||
Sbjct: 68 atattagtttacaaagggagta 89
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
|||||||||||||||||||||||| ||| |||| | |||| |||||| |||||||| |
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30
Query: 82 cttatatttgtttacagagggagta 106
|||||||| ||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 71/85 (83%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| ||||||||||||||||| |||| || |||| |||| |||||||| |
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaacgct 62
Query: 82 cttatatttgtttacagagggagta 106
||||||| |||||| |||||||||
Sbjct: 63 attatattagtttacggagggagta 87
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 83.8 bits (42), Expect = 5e-16
Identities = 79/92 (85%), Gaps = 7/92 (7%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttata-------tcactactttagtgatct 74
|||||||||| ||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 96 tactccctccttaaactaatataagagcgtttagactttagatcactactttagtgatct 37
Query: 75 aaacgttcttatatttgtttacagagggagta 106
||| | ||||||||| ||||||||||||||||
Sbjct: 36 aaaagctcttatattagtttacagagggagta 5
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaa 77
||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaa 60
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
|||||||||| |||||||||||||||||||||| || | || |||||||||||| | |
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 82 cttatatttgtttacagagggagtat 107
||||||| |||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagtat 4
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| |||||||||||||| |||||||| ||||||| |||| | ||||||| | |
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64
Query: 82 cttatatttgtttacagagggagta 106
|||||||| ||||| |||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 83.8 bits (42), Expect = 5e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||| |
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcactac-ttaatgatctaaacgct 30
Query: 82 cttatatttgttta 95
||||||| |||||
Sbjct: 29 tttatattagttta 16
Score = 71.9 bits (36), Expect = 2e-12
Identities = 76/88 (86%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 19 aactactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaac 78
||||||||||| | ||||||||||||| ||| |||| |||| || | |||||||||||
Sbjct: 2 aactactcccttcataaactaatataaaagcgtttagatcattaagt-agtgatctaaat 60
Query: 79 gttcttatatttgtttacagagggagta 106
| ||||||||| ||||||||||||||||
Sbjct: 61 gctcttatattagtttacagagggagta 88
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
|||||||||||||||||||||||||||| |||| | |||| |||||| |||||||| |
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 82 cttatatttgtttacagagggagta 106
||||||| ||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 23 actccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgttc 82
|||||||||||||||||||||||||| |||| ||||| | |||| |||||| |||| ||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 83 ttatatttgtttacagaggga 103
||||||| ||||||| |||||
Sbjct: 28 ttatattagtttacaaaggga 8
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 32 gtaaactaatataagagcatttatatcactactttagtgatctaaacgttcttatatttg 91
|||||||||||||||||| || | |||| || | ||||||||||| ||||||||| |
Sbjct: 15 gtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctcttatattag 74
Query: 92 tttacagagggagt 105
||||| ||||||||
Sbjct: 75 tttacggagggagt 88
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 79.8 bits (40), Expect = 8e-15
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| ||||||||||||||||| |||| ||||||| |||||| || |||| |
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 82 cttatatttgtttacagagggagtatat 109
||||||| |||||||||||||||||||
Sbjct: 65 tttatattagtttacagagggagtatat 92
Score = 73.8 bits (37), Expect = 5e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| |||||||||||||| || |||| || |||| ||||||||||||| |
Sbjct: 89 tactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacact 30
Query: 82 cttatatttgtttacagagggagta 106
|||||||| ||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 32 gtaaactaatataagagcatttatatcactactttagtgatctaaacgttcttatatttg 91
|||||| ||||||||||| |||| |||||||||||||||||||| || ||||||||||
Sbjct: 15 gtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttatatttc 74
Query: 92 tttacagagggagtatat 109
||| | ||| ||||||||
Sbjct: 75 tttgcggagtgagtatat 92
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 66 tagtgatctaaacgttcttatatttgtttacagag 100
|||||||||||||| ||||||||||||||||||||
Sbjct: 45 tagtgatctaaacgctcttatatttgtttacagag 11
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 73.8 bits (37), Expect = 5e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 59 actactttagtgatctaaacgttcttatatttgtttacagagggagtat 107
|||| |||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 52 actattttagtgatctaaacgatcttatatttctttacagagggagtat 4
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 73.8 bits (37), Expect = 5e-13
Identities = 75/88 (85%), Gaps = 6/88 (6%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| ||||| ||||||||||| |||| ||||||| ||||||||||| |
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgct 30
Query: 82 cttatatttgtttacagagggagtatat 109
||||||||| ||||||||||||||||||
Sbjct: 29 cttatatttctttacagagggagtatat 2
Score = 67.9 bits (34), Expect = 3e-11
Identities = 72/85 (84%), Gaps = 6/85 (7%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| ||||| ||||||||||| |||| |||| |||||||||||||| |
Sbjct: 5 tactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgct 58
Query: 82 cttatatttgtttacagagggagta 106
||||||||| |||||||||||||||
Sbjct: 59 cttatatttctttacagagggagta 83
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 67.9 bits (34), Expect = 3e-11
Identities = 74/88 (84%), Gaps = 7/88 (7%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcattt-------atatcactactttagtgatct 74
||||||||| |||||||||||||||||| ||| || |||||| |||||||||||
Sbjct: 96 tactccctctgtaaactaatataagagcgtttcatttagatctcactattttagtgatct 37
Query: 75 aaacgttcttatatttgtttacagaggg 102
||| | ||||||||| ||||||||||||
Sbjct: 36 aaatgctcttatattagtttacagaggg 9
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 21 ctactccctccgtaaactaatataagagcatttatatcacta 62
|||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 4 ctaccccctctgtaaactaatataagagcatttagatcacta 45
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||
Sbjct: 87 tactccctctgtaaagaaatataagagtgtttagatcactactttagtgatctaaac--a 30
Query: 82 cttatatttgtttacagagggagta 106
|||| |||| ||||| |||||||||
Sbjct: 29 cttacatttatttacggagggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
||||||||||||||| ||| |||| | |||| ||||||| ||||||||||||| |
Sbjct: 5 tactccctccgtaaataaatgtaagtg--tttagatcactaaagtagtgatctaaacact 62
Query: 82 cttatatttgtttacagagggagta 106
||||||||| |||||||||||||||
Sbjct: 63 cttatatttctttacagagggagta 87
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagtgatctaaacgtt 81
|||||||||||||||||||||||| | ||||| | || || |||||| || |||| | |
Sbjct: 89 tactccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgct 30
Query: 82 cttatatttgtttacagagggagta 106
||||||| ||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagcattta 54
||||||||| |||||||||||||| ||||||||
Sbjct: 5 tactccctctgtaaactaatataaaagcattta 37
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 21 ctactccctccgtaaactaatataagagc 49
|||||||||||||||||||||||||||||
Sbjct: 63 ctactccctccgtaaactaatataagagc 35
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagagca 50
||||||||| |||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagca 33
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 81 tcttatatttgtttacagagggagtat 107
||||||||| |||||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagtat 4
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 59 actactttagtgatctaaacgttcttatatttgtttacagagggagta 106
|||||| |||||||||||||| ||||||||| |||||| ||||||||
Sbjct: 45 actactctagtgatctaaacgctcttatattattttacatagggagta 92
Score = 54.0 bits (27), Expect = 5e-07
Identities = 74/89 (83%), Gaps = 3/89 (3%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagcatttatatcactactttagt---gatctaaac 78
|||||||| ||||| |||||||||||| |||| ||||||| |||| |||||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcactagagtagtagtgatctaaac 33
Query: 79 gttcttatatttgtttacagagggagtat 107
| ||| |||||| || |||||||||||||
Sbjct: 32 gctctcatatttattcacagagggagtat 4
>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 82
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 66 tagtgatctaaacgttcttatatttgtttacagagggagtatat 109
|||||||||||| | |||||||||| ||||||||||||| ||||
Sbjct: 38 tagtgatctaaatgatcttatatttctttacagagggagaatat 81
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 74 taaacgttcttatatttgtttacagagggagtat 107
|||||| |||||||||| ||||||||||||||||
Sbjct: 37 taaacgatcttatatttctttacagagggagtat 4
>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
subsp. dicoccoides
Length = 96
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 66 tagtgatctaaacgttcttatatttgtttac 96
||||||||||||||||||||||||| |||||
Sbjct: 45 tagtgatctaaacgttcttatatttctttac 15
Score = 52.0 bits (26), Expect = 2e-06
Identities = 70/84 (83%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 29 tccgtaaactaatataagagcatttatatcactact---ttagtgatctaaacgttctta 85
|||||||| ||||||||| | |||| ||||||||| ||||||||||| ||| ||||
Sbjct: 12 tccgtaaagaaatataagaacgtttagatcactactattttagtgatctagacgctcttg 71
Query: 86 tatttgtttacagagggagtatat 109
||||| ||||| || |||||||||
Sbjct: 72 tatttctttacggatggagtatat 95
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tactccctccgtaaactaatataagagc 49
||||||||| ||||||||||||||||||
Sbjct: 74 tactccctcggtaaactaatataagagc 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 22 tactccctccgtaaactaatataagag 48
||||||||| |||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagag 31
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 81 tcttatatttgtttacagagggagta 106
||||||||| ||||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
