miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 190 bits (96), Expect = 4e-48
Identities = 120/128 (93%)
Strand = Plus / Plus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtca 72
|||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 5 tactccctccgttccaaaattcttgtcttagatttgtttagatatgaatgtatctagtta 64
Query: 73 agttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggacag 132
|||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||| |
Sbjct: 65 agttttagtatttagatacatcaatttctagacaaagctaagacaagaattttaggacgg 124
Query: 133 agggagta 140
||||||||
Sbjct: 125 agggagta 132
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatcta 68
||||||||||||||||||||||||||| ||| ||||| |||| || |||||||||
Sbjct: 132 tactccctccgtcctaaaattcttgtcttagctttgtctagaaattgatgtatcta 77
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 85 tagatacatccatttctagaaaaagctaagacaagaattttgggacagagggagta 140
||||||||| ||| |||| | ||| |||||||||||||||||| || |||||||||
Sbjct: 60 tagatacattcatatctaaacaaatctaagacaagaattttggaacggagggagta 5
>RF00906;MIR1122;DQ890004.1/48-183 4513:Hordeum vulgare
Length = 136
Score = 182 bits (92), Expect = 9e-46
Identities = 119/128 (92%)
Strand = Plus / Minus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtca 72
|||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 132 tactacctccgttccaaaattcttgtcttagatttgtttagatatgaatgtatctagtta 73
Query: 73 agttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggacag 132
|||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||| |
Sbjct: 72 agttttagtatttagatacatcaatttctagacaaagctaagacaagaattttaggacgg 13
Query: 133 agggagta 140
||||||||
Sbjct: 12 agggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatcta 68
||||||||||||||||||||||||||| ||| ||||| |||| || |||||||||
Sbjct: 5 tactccctccgtcctaaaattcttgtcttagctttgtctagaaattgatgtatcta 60
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 85 tagatacatccatttctagaaaaagctaagacaagaattttgggacagagggagta 140
||||||||| ||| |||| | ||| |||||||||||||||||| || |||| ||||
Sbjct: 77 tagatacattcatatctaaacaaatctaagacaagaattttggaacggaggtagta 132
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 176 bits (89), Expect = 6e-44
Identities = 119/129 (92%)
Strand = Plus / Plus
Query: 12 gtactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtc 71
||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaattattgtcttagatttgtttagatatgaatgtatctagtc 63
Query: 72 aagttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggaca 131
||||||||||| ||||||||||| ||||||| | |||| ||||||||||||||||||||
Sbjct: 64 aagttttagtaattagatacatctatttctaaacaaagttaagacaagaattttgggacg 123
Query: 132 gagggagta 140
||||||||
Sbjct: 124 aagggagta 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 85 tagatacatccatttctagaaaaagctaagacaagaattttgggacagagggagta 140
||||||||| ||| |||| | ||| ||||||||| ||||||||||| |||||||||
Sbjct: 60 tagatacattcatatctaaacaaatctaagacaataattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatcta 68
|||||||| ||||| |||||||||||| || |||||||||| || |||||||||
Sbjct: 132 tactcccttcgtcccaaaattcttgtcttaactttgtttagaaatagatgtatcta 77
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 159 bits (80), Expect = 1e-38
Identities = 116/128 (90%)
Strand = Plus / Plus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtca 72
|||||||||||||| |||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaattcttgtcttacatttgtctagatatgaatgtatctagtca 64
Query: 73 agttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggacag 132
|||||||||||| |||||||| ||||||| | ||| |||||||||||||||||||| |
Sbjct: 65 cgttttagtattttgatacatctatttctaaacaaacttaagacaagaattttgggacgg 124
Query: 133 agggagta 140
||||||||
Sbjct: 125 agggagta 132
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 85 tagatacatccatttctagaaaaagctaagacaagaattttgggacagagggagtag 141
||||||||| ||| |||||| ||| |||||||||||||||||||| ||||||||||
Sbjct: 60 tagatacattcatatctagacaaatgtaagacaagaattttgggacggagggagtag 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 12 gtactccctccgtcctaaaattcttgtcgtagatttgtttaga 54
||||||||||||||| |||||||||||| || ||||||||||
Sbjct: 133 gtactccctccgtcccaaaattcttgtcttaagtttgtttaga 91
>RF00906;MIR1122;AF254799.1/46723-46588 4513:Hordeum vulgare
Length = 136
Score = 145 bits (73), Expect = 2e-34
Identities = 115/129 (89%)
Strand = Plus / Plus
Query: 12 gtactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtc 71
||||||| ||||||| |||||||||||| || |||||| || ||||||||||||||||||
Sbjct: 4 gtactccttccgtcccaaaattcttgtcttaaatttgtctatatatgaatgtatctagtc 63
Query: 72 aagttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggaca 131
| | |||||||||||||||||||||| | |||| || ||||||||||||||||||| ||
Sbjct: 64 atggtttagtatttagatacatccatgtgtagacaatgctaagacaagaattttggaacg 123
Query: 132 gagggagta 140
|||||||||
Sbjct: 124 gagggagta 132
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 85 tagatacatccatttctagaaaaagctaagacaagaattttgggacagagggagta 140
||||||||| ||| | |||| ||| |||||||||||||||||||| || ||||||
Sbjct: 60 tagatacattcatatatagacaaatttaagacaagaattttgggacggaaggagta 5
>RF00906;MIR1122;AY853252.1/33762-33628 4513:Hordeum vulgare
Length = 135
Score = 145 bits (73), Expect = 2e-34
Identities = 116/129 (89%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 12 gtactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtc 71
|||||||||||||| |||||||||| | || ||||||||||||| ||||||||||||||
Sbjct: 4 gtactccctccgtctcaaaattcttgccttatatttgtttagatacgaatgtatctagtc 63
Query: 72 aagttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggaca 131
|| ||| |||||||||||||||||| ||||||| |||||||||||||||||||||| |
Sbjct: 64 aaattt-agtatttagatacatccagttctagacaaagctaagacaagaattttggaatg 122
Query: 132 gagggagta 140
|||||||||
Sbjct: 123 gagggagta 131
>RF00906;MIR1122;DQ145528.1/676-542 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 135
Score = 139 bits (70), Expect = 1e-32
Identities = 107/118 (90%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 23 gtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtcaagttttagta 82
|||| |||||||||||| ||||||||| || ||||||||||||||||||| |||||||||
Sbjct: 15 gtcccaaaattcttgtcttagatttgtctaaatatgaatgtatctagtcatgttttagta 74
Query: 83 tttagatacatccatttctagaaaaagctaagacaagaattttgggacagagggagta 140
||||||||||||||||||||| | || |||||||||||||||||||| ||| |||||
Sbjct: 75 tttagatacatccatttctag-acaatttaagacaagaattttgggacggagagagta 131
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 85 tagatacatccatttctagaaaaagctaagacaagaattttgggacagaggga 137
||||||||| ||| | |||| ||| |||||||||||||||||||||| |||||
Sbjct: 60 tagatacattcatatttagacaaatctaagacaagaattttgggacaaaggga 8
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 133 bits (67), Expect = 8e-31
Identities = 117/134 (87%), Gaps = 6/134 (4%)
Strand = Plus / Plus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtca 72
|||||||||||||| ||| |||||||| ||||||||| ||||||||||||||| ||||||
Sbjct: 5 tactccctccgtcccaaacttcttgtcttagatttgtctagatatgaatgtatgtagtca 64
Query: 73 agttttagtatttaga------tacatccatttctagaaaaagctaagacaagaattttg 126
||||| ||||||||| ||||||||||| |||| ||| |||||||||||||||||
Sbjct: 65 cgttttggtatttagatacacctacatccatttatagacaaacctaagacaagaattttg 124
Query: 127 ggacagagggagta 140
|||| |||||||||
Sbjct: 125 ggacggagggagta 138
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 88 atacatccatttctagaaaaagctaagacaagaattttgggacagagggagta 140
|||||| ||| |||||| ||| |||||||||||| |||||||| |||||||||
Sbjct: 57 atacattcatatctagacaaatctaagacaagaagtttgggacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgt 49
|||||||||||||| |||||||||||| ||| |||||
Sbjct: 138 tactccctccgtcccaaaattcttgtcttaggtttgt 102
>RF00906;MIR1122;AP009567.1/9225-9090 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 119 bits (60), Expect = 1e-26
Identities = 111/128 (86%)
Strand = Plus / Plus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtca 72
||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||| |||
Sbjct: 5 tactccctctgtcataaaattcttgtcttagatttgtctagatatgaatgtatctaatca 64
Query: 73 agttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggacag 132
||||| ||||||||||| |||||| |||| ||| ||||||||||| |||| ||| |
Sbjct: 65 cgttttgacatttagatacaaccatttttagacaaacctaagacaagatttttaagacgg 124
Query: 133 agggagta 140
||||||||
Sbjct: 125 agggagta 132
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 84 ttagatacatccatttctagaaaaagctaagacaagaattttgggacagagggagta 140
|||||||||| ||| |||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 61 ttagatacattcatatctagacaaatctaagacaagaattttatgacagagggagta 5
>RF00906;MIR1122;AM932686.1/57613-57747 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 115 bits (58), Expect = 2e-25
Identities = 113/130 (86%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 12 gtactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtc 71
|||||||||| |||| |||||||||||| ||||||||| |||||| | ||||||| ||||
Sbjct: 4 gtactccctcggtcccaaaattcttgtcttagatttgtctagatacggatgtatcaagtc 63
Query: 72 aagttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggaca 131
| |||| ||||| ||||||||| | |||||| ||| |||||||||||| |||||||||
Sbjct: 64 acattttcgtatt-agatacatctgtatctagacaaatctaagacaagaaatttgggaca 122
Query: 132 gagggagtag 141
||||||||||
Sbjct: 123 gagggagtag 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 87 gatacatccatttctagaaaaagctaagacaagaattttgggacagagggagta 140
||||||||| | |||||| ||| ||||||||||||||||||||| |||||||||
Sbjct: 58 gatacatccgtatctagacaaatctaagacaagaattttgggaccgagggagta 5
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 113 bits (57), Expect = 7e-25
Identities = 112/129 (86%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 12 gtactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtc 71
||||||||||||||| |||||||||||| ||||||||| || ||| | ||||||| ||||
Sbjct: 4 gtactccctccgtcccaaaattcttgtcttagatttgtctaaatacggatgtatcaagtc 63
Query: 72 aagttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggaca 131
| ||||||||| |||||||||||| | ||||| ||| |||||||||||||||||| ||
Sbjct: 64 acgttttagta-ttagatacatccgtatctaggcaaatctaagacaagaattttggaacg 122
Query: 132 gagggagta 140
|||| ||||
Sbjct: 123 gaggaagta 131
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 87 gatacatccatttctagaaaaagctaagacaagaattttgggacagagggagta 140
||||||||| | | |||| ||| ||||||||||||||||||||| |||||||||
Sbjct: 58 gatacatccgtatttagacaaatctaagacaagaattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatcta 68
|||| ||||||| | |||||||||||| |||||||| |||||| | |||||||||
Sbjct: 131 tacttcctccgttccaaaattcttgtcttagatttgcctagatacggatgtatcta 76
>RF00906;MIR1122;AF277239.1/1056-1190 37679:Heteranthelium piliferum
Length = 135
Score = 113 bits (57), Expect = 7e-25
Identities = 111/128 (86%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtca 72
|||||||||||||| |||||||||||| ||||||||| || ||| | |||||||||||||
Sbjct: 5 tactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatctagtca 64
Query: 73 agttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggacag 132
|||||||| ||||| |||| ||| |||| | ||| ||||||| ||||||||||||| |
Sbjct: 65 tgttttagt-gttagacacattcatatctaaacaaatctaagacnagaattttgggacgg 123
Query: 133 agggagta 140
||||||||
Sbjct: 124 agggagta 131
Score = 81.8 bits (41), Expect = 2e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatcta 68
|||||||||||||| |||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 131 tactccctccgtcccaaaattctngtcttagatttgtttagatatgaatgtgtcta 76
>RF00906;MIR1122;FJ374610.1/683-817 4568:Triticum monococcum
Length = 135
Score = 111 bits (56), Expect = 3e-24
Identities = 111/128 (86%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtca 72
|||||| || |||| |||||||||||| ||||||| | || ||| | ||||||| | |||
Sbjct: 5 tactccttctgtcccaaaattcttgtcttagatttttctaaatagggatgtatcaactca 64
Query: 73 agttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggacag 132
||||||||||| |||||||||||| |||||| ||| ||||||||||||||||||||| |
Sbjct: 65 cgttttagtatt-agatacatccatatctagacaaatctaagacaagaattttgggacgg 123
Query: 133 agggagta 140
||||||||
Sbjct: 124 agggagta 131
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatcta 68
|||||||||||||| |||||||||||| ||||||||| |||||||| |||||||||
Sbjct: 131 tactccctccgtcccaaaattcttgtcttagatttgtctagatatggatgtatcta 76
>RF00906;MIR1122;EU660901.1/93085-92951 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 105 bits (53), Expect = 2e-22
Identities = 111/129 (86%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 12 gtactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtc 71
|||||| ||||||||| ||||||||||| || |||||| || | | ||||||||| ||||
Sbjct: 4 gtactcgctccgtcctgaaattcttgtcttaaatttgtctaaagacgaatgtatcaagtc 63
Query: 72 aagttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggaca 131
| ||||| ||||| |||||||||| | |||||| ||||||| ||||||||||||||||
Sbjct: 64 acgtttttgtatt-agatacatccgtatctagacaaagctacaacaagaattttgggacg 122
Query: 132 gagggagta 140
|||||||||
Sbjct: 123 gagggagta 131
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 10 tggtactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatcta 68
||||||||||||||||| ||||||||||| |||| ||||| |||||| | |||||||||
Sbjct: 134 tggtactccctccgtcccaaaattcttgttgtagctttgtctagatacggatgtatcta 76
>RF00906;MIR1122;AY887089.1/1801-1936 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 103 bits (52), Expect = 7e-22
Identities = 109/128 (85%)
Strand = Plus / Plus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtca 72
||||||||||||| |||||| |||| | |||||| |||||||| ||||||||||| |
Sbjct: 5 tactccctccgtctcaaaattattgttttgaatttgtctagatatggatgtatctagtta 64
Query: 73 agttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggacag 132
|||||||||||| || ||||||| |||| ||| | ||||||||||||||||||||| |
Sbjct: 65 cattttagtatttaaatgcatccatatctaaaaacatctaagacaagaattttgggacgg 124
Query: 133 agggagta 140
||||||||
Sbjct: 125 agggagta 132
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatg 58
|||||||||||||| |||||||||||| ||||| | ||||||||||
Sbjct: 132 tactccctccgtcccaaaattcttgtcttagatgtttttagatatg 87
>RF00906;MIR1122;DJ023121.1/176-54 4513:Hordeum vulgare
Length = 123
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaat 61
||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 5 tactccctccgtcctaaaattcttgtcttagatttgtctagatatgaat 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 99 tctagaaaaagctaagacaagaattttgggacagagggagta 140
|||||| ||| |||||||||||||||| |||| |||||||||
Sbjct: 46 tctagacaaatctaagacaagaattttaggacggagggagta 5
>RF00906;MIR1122;AY853252.1/217307-217173 4513:Hordeum vulgare
Length = 135
Score = 81.8 bits (41), Expect = 2e-15
Identities = 108/129 (83%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtca 72
|||||||||| || |||||||| ||| || |||| | || ||||| |||||||||||||
Sbjct: 5 tactccctccatctcaaaattctggtcttaaatttctctaaatatggatgtatctagtca 64
Query: 73 agttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggacag 132
|||||||| || |||||||||| | |||||| ||| | |||||||||||||||||| |
Sbjct: 65 cgttttagtgtt-agatacatccgtatctagataaatcctagacaagaattttgggacgg 123
Query: 133 agggagtag 141
||| |||||
Sbjct: 124 aggtagtag 132
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 99/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 12 gtactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtc 71
||||||||||||||| |||||| ||||| || |||||| || ||||| |||||| ||||
Sbjct: 4 gtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtt 63
Query: 72 aagttttagtatttagatacatccatttctagaaaaagctaagacaagaattttggga 129
| ||||||| |||||||||||| | |||| | ||| |||||||||||||||||||
Sbjct: 64 acattttagt-gttagatacatccgtatctaaacaaatgtaagacaagaattttggga 120
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 16 tccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatcta 68
||||||| ||| |||||||||||| || ||||||||||||| | |||||||||
Sbjct: 128 tccctccatcccaaaattcttgtcttacatttgtttagatacggatgtatcta 76
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 88 atacatccatttctagaaaaagctaagacaagaattttgggacagagggagta 140
|||||||||| | |||| ||| |||||||| ||||||||||| |||||||||
Sbjct: 57 atacatccatatttagacaaatttaagacaacaattttgggacggagggagta 5
>RF00906;MIR1122;EU660895.1/53244-53110 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 71.9 bits (36), Expect = 2e-12
Identities = 106/128 (82%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtca 72
|||||||||| ||| |||||||||||| ||||||||| || ||| | |||||| |||||
Sbjct: 131 tactccctccatcccaaaattcttgtcttagatttgtctaaatacggatgtatgaagtca 72
Query: 73 agttttagtatttagatacatccatttctagaaaaagctaagacaagaattttgggacag 132
|||||||| ||| |||||| | |||||| ||| |||||||||||||||| ||| |
Sbjct: 71 tattttagta-ttaaatacatatgtatctagacaaatgtaagacaagaattttgagacgg 13
Query: 133 agggagta 140
||||||||
Sbjct: 12 agggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 88 atacatccatttctagaaaaagctaagacaagaattttgggacagagggagtag 141
|||||||| | | |||| ||| |||||||||||||||||||| ||||||||||
Sbjct: 79 atacatccgtatttagacaaatctaagacaagaattttgggatggagggagtag 132
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagata 56
||||||||||||| |||||||||||| || |||||| ||||||
Sbjct: 5 tactccctccgtctcaaaattcttgtcttacatttgtctagata 48
>RF00906;MIR1122;EF540321.1/52965-52831 4571:Triticum turgidum
Length = 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 98/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 12 gtactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctagtc 71
|||| |||||||||| |||||||||||| || |||||| || ||| | |||||||||||
Sbjct: 132 gtaccccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatctagtt 73
Query: 72 aagttttagtatttagatacatccatttctagaaaaagctaagacaagaattttggga 129
| ||||||| ||||||||||| | |||| | ||| |||||||||||||||||||
Sbjct: 72 acattttagt-gttagatacatctttatctaaacaaatgtaagacaagaattttggga 16
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 16 tccctccgtcctaaaattcttgtcgtagatttgtttagata 56
||||||| ||| |||||||||||| || |||||||||||||
Sbjct: 8 tccctccatcccaaaattcttgtcttacatttgtttagata 48
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 85 tagatacatccatttctagaaaaagctaagacaagaattttgggacagaggg 136
||||||||||| | | |||| ||| |||||||||||||||||||| |||||
Sbjct: 76 tagatacatccgtatttagacaaatttaagacaagaattttgggacggaggg 127
>RF00906;MIR1122;EU626553.1/30213-30109 4572:Triticum urartu
Length = 105
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagata 56
|||||||||||||| |||||||||||| ||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaattcttgtcttagatttatttagata 58
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 110 ctaagacaagaattttgggacagagggagtag 141
||||||||||||||||||||| ||||||||||
Sbjct: 71 ctaagacaagaattttgggacggagggagtag 102
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 90 acatccatttctagaaaaagctaagacaagaattttgg 127
|||||| | |||||| ||| ||||||||||||||||||
Sbjct: 54 acatccgtatctagataaatctaagacaagaattttgg 17
>RF00906;MIR1122;X73528.1/281-181 4565:Triticum aestivum (bread
wheat)
Length = 101
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 13 tactccctccgtcctaaaattcttgtcgtagatttgtttagata 56
|||||||||| || ||||||||||||| ||||||||| ||||||
Sbjct: 97 tactccctccatcttaaaattcttgtcttagatttgtctagata 54
>RF00906;MIR1122;EU660894.1/143713-143848 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 136
Score = 50.1 bits (25), Expect = 9e-06
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 60 atgtatctagtcaagttttagtatttagatacatccatttctagaaaaagctaagacaag 119
|||||||||| || |||||||||| ||| ||||||||||| | || ||| ||| ||||
Sbjct: 52 atgtatctagacatgttttagtatataggtacatccatttttggacaaatggaagtcaag 111
Query: 120 aattttgggacagagggagta 140
||||||| || |||||||||
Sbjct: 112 tattttggaacggagggagta 132
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 85 tagatacatccatttctagaaaaagctaagacaagaattttgggacagagggagtagaac 144
||||||||||| | |||||| ||| | |||||||| | ||||| || |||||||||||||
Sbjct: 76 tagatacatccgtatctagacaaatccaagacaagtaatttggaacggagggagtagaac 135
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 13 tactccctccgtcctaaaattcttgtcgtaga 44
|||||||||||||| ||||| |||||||||||
Sbjct: 121 tactccctccgtcccaaaatacttgtcgtaga 90
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 13 tactccctccgtcctaaaattcttgtcgtaga 44
|||||||||||||| ||||| |||||||||||
Sbjct: 5 tactccctccgtcccaaaatacttgtcgtaga 36
>RF00906;MIR1122;EU862588.1/607-710 4516:Hordeum bulbosum
Length = 104
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 84 ttagatacatccatttctagaaaaagctaagacaagaattttgggacagagg 135
|||||||||||| | |||||| ||| |||||||||| ||||||||| ||||
Sbjct: 44 ttagatacatccgtatctagataaatctaagacaagctttttgggacggagg 95
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 10 tggtactccctccgtcctaaaattcttgtc 39
||||||||||||||||| ||||| ||||||
Sbjct: 2 tggtactccctccgtccgaaaatacttgtc 31
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 12 gtactccctccgtcctaaaattcttgtcgtagatttgtttagatatgaatgtatctag 69
||||||||||||| || || | |||||| || |||||| |||||| | ||||||||||
Sbjct: 4 gtactccctccgttctgaattacttgtcttaaatttgtctagatacggatgtatctag 61
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 106 aaagctaagacaagaattttgggacagagggagtagaa 143
|||| |||||||| |||||||||| ||||||||||||
Sbjct: 67 aaagttaagacaattattttgggacggagggagtagaa 104
>RF00906;MIR1122;AL845344.4/40945-41080 4530:Oryza sativa (rice)
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 121 attttgggacagagggagtaga 142
||||||||||||||||||||||
Sbjct: 24 attttgggacagagggagtaga 3
