miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 159 bits (80), Expect = 1e-38
Identities = 95/100 (95%)
Strand = Plus / Minus
Query: 11 atgtactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaatt 70
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 104 atgtactccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaaatt 45
Query: 71 gtactaagcttgagacacttattttggaacggagggagta 110
|||||| ||| ||||||||||||||||||||||||||||
Sbjct: 44 gtactacgctcaagacacttattttggaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagtac 111
|||||||| ||||||||| |||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagtac 102
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 145 bits (73), Expect = 2e-34
Identities = 94/101 (93%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 101 tactccctctgtctcaaaataactgtctcaacattgtactagctctagtacaaaattgta 42
Query: 74 ctaagcttgagacacttattttggaacggagggagtactac 114
||||| || |||||||||||||| ||||||||||||||||
Sbjct: 41 ctaagattaagacacttattttgagacggagggagtactac 1
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 gtactccctccgtctcaaaataactgtct 41
||||||||||||||||||||||| |||||
Sbjct: 4 gtactccctccgtctcaaaataagtgtct 32
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 137 bits (69), Expect = 4e-32
Identities = 91/97 (93%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgtctca-ctttgtactaactctagtataaaattgta 42
Query: 74 ctaagcttgagacacttattttggaacggagggagta 110
||||| |||||||||||||||||| ||||||||||||
Sbjct: 41 ctaaggttgagacacttattttgggacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 81 tgagacacttattttggaacggagggagta 110
||||||||||||||||| ||||||||||||
Sbjct: 71 tgagacacttattttgggacggagggagta 100
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaac 45
||||||||||||| |||||||| |||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaac 36
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 137 bits (69), Expect = 4e-32
Identities = 90/97 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
||||||||||||| |||||||| ||||||||||||||||||||| ||||| |||||| |
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaactttgtactagctgtagtacaaaattaca 42
Query: 74 ctaagcttgagacacttattttggaacggagggagta 110
|||||||||||||||||||||||| ||||||||||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagta 110
|||||||||||||||||| ||||||||||||
Sbjct: 71 ttgagacacttattttgggacggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaa 44
||||||||||||| |||||||| ||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 135 bits (68), Expect = 1e-31
Identities = 92/100 (92%)
Strand = Plus / Minus
Query: 11 atgtactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaatt 70
||||||| |||||||| |||||||||||||||||||||||| ||| | ||||| ||||||
Sbjct: 104 atgtacttcctccgtcccaaaataactgtctcaactttgtattagatttagtacaaaatt 45
Query: 71 gtactaagcttgagacacttattttggaacggagggagta 110
||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 44 gtattaagcttaagacacttattttggaacggagggagta 5
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 131 bits (66), Expect = 2e-30
Identities = 78/82 (95%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||
Sbjct: 101 tactccctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagttgta 42
Query: 74 ctaagcttgagacacttatttt 95
|||||||| |||||||||||||
Sbjct: 41 ctaagcttaagacacttatttt 20
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 86/93 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||
Sbjct: 101 tactccctccgtcccaaaatatctgtcttaactttgtactagctcatgtataaaattgta 42
Query: 74 ctaagcttgagacacttattttggaacggaggg 106
|||||||| ||||||||||||||| ||||||||
Sbjct: 41 ctaagcttaagacacttattttgggacggaggg 9
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 89/97 (91%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
|||||||||||| |||||||| |||||||| |||||||||||||||||| ||| |||||
Sbjct: 5 tactccctccgttccaaaataagtgtctcaaatttgtactagctctagtacaaagttgta 64
Query: 74 ctaagcttgagacacttattttggaacggagggagta 110
|||||||||||| | ||||||||||||||||||||||
Sbjct: 65 ctaagcttgagatagttattttggaacggagggagta 101
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 80 ttgagacacttattttggaacggagggagta 110
|||||||||||||||||||||||||||||||
Sbjct: 35 ttgagacacttattttggaacggagggagta 5
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 89/97 (91%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
||||||||||||| ||||||||||||||||||||| |||||| ||||||||||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctagtataaatttata 42
Query: 74 ctaagcttgagacacttattttggaacggagggagta 110
|||||||| ||||| ||||||||| ||||||||||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtct 41
||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataactgtct 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagta 110
|||||||| ||||||||| ||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 89/97 (91%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
||||||||||||| |||||||| ||||||||||||||| || || ||||| ||| |||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaagttgta 42
Query: 74 ctaagcttgagacacttattttggaacggagggagta 110
|||||||||||||||||||||||| ||||||||||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaa 44
||||||||||||| |||||||| ||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagta 110
|||||||| ||||||||| ||||||||||||
Sbjct: 71 ttgagacatttattttgggacggagggagta 101
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 125 bits (63), Expect = 1e-28
Identities = 90/99 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
|||||||||||||||||||||| | |||||||||| ||||||||||||||||| |||||
Sbjct: 101 tactccctccgtctcaaaataagtatctcaactttacactagctctagtataaagttgta 42
Query: 74 ctaagcttgagacacttattttggaacggagggagtact 112
||||| |||||| | ||||||||| ||||||||||||||
Sbjct: 41 ctaagtttgagaaagttattttgggacggagggagtact 3
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 13 gtactccctccgtctcaaaataactgtctcaa 44
|||||||||||||| |||||||||| ||||||
Sbjct: 4 gtactccctccgtcccaaaataactttctcaa 35
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 121 bits (61), Expect = 2e-27
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
|||||||||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||
Sbjct: 101 tactccctccgtttcaaaataaatgtctcaactttgtactagctctagtacaaagttgta 42
Query: 74 ctaagcttgagacacttattttggaacggagggagta 110
|||||| ||| ||| |||||||| || ||||||||||
Sbjct: 41 ctaagcatgaaacaattattttgaaatggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagta 110
|||||||| |||||||| |||||||||||||
Sbjct: 71 ttgagacatttattttgaaacggagggagta 101
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 121 bits (61), Expect = 2e-27
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
||||||||||||| ||||||||||||||||||||| |||||| |||| |||||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctaatataaatttata 42
Query: 74 ctaagcttgagacacttattttggaacggagggagta 110
|||||||| ||||| ||||||||| ||||||||||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtct 41
||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataactgtct 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagta 110
|||||||| ||||||||| ||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 121 bits (61), Expect = 2e-27
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||| ||
Sbjct: 101 tactccctccgtcccaaaataattgtcttaactttgttctagctctagtataaaattata 42
Query: 74 ctaagcttgagacacttattttggaacggagggagta 110
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 41 ctaagcttaagacacttattttaaaacggagagagta 5
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 121 bits (61), Expect = 2e-27
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
||||||||||||| |||||||| ||||||||||||||| || || ||||| || |||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaggttgta 42
Query: 74 ctaagcttgagacacttattttggaacggagggagta 110
|||||||||||||||||||||||| ||||||||||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaa 44
||||||||||||| |||||||| ||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagta 110
|||||||| ||||||||| ||||||||||||
Sbjct: 71 ttgagacatttattttgggacggagggagta 101
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 117 bits (59), Expect = 4e-26
Identities = 89/99 (89%)
Strand = Plus / Minus
Query: 12 tgtactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattg 71
|||||||||||| || |||||||| |||||||||||||||||| |||||||| ||| ||
Sbjct: 103 tgtactccctccatcccaaaataagtgtctcaactttgtactatctctagtacaaatttt 44
Query: 72 tactaagcttgagacacttattttggaacggagggagta 110
||||||||| ||||||||||||||| ||||||||||||
Sbjct: 43 tactaagctcaagacacttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagtac 111
|||||||||||||||||| | |||||||||||
Sbjct: 71 ttgagacacttattttgggatggagggagtac 102
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 117 bits (59), Expect = 4e-26
Identities = 89/99 (89%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
|||||||||||||||||||||| | ||||| |||| ||||||||||||||||| |||||
Sbjct: 101 tactccctccgtctcaaaataagtatctcagctttacactagctctagtataaagttgta 42
Query: 74 ctaagcttgagacacttattttggaacggagggagtact 112
||||| |||||| | ||||||||| ||||||||||||||
Sbjct: 41 ctaagtttgagaaagttattttgggacggagggagtact 3
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 13 gtactccctccgtctcaaaataactgtctcaa 44
|||||||||||||| |||||||||| ||||||
Sbjct: 4 gtactccctccgtcccaaaataactttctcaa 35
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 117 bits (59), Expect = 4e-26
Identities = 89/99 (89%)
Strand = Plus / Minus
Query: 13 gtactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgt 72
|||||||||||||| |||||||| ||||| |||||||||||| || ||||| ||| ||||
Sbjct: 102 gtactccctccgtcccaaaataagtgtcttaactttgtactaactttagtacaaagttgt 43
Query: 73 actaagcttgagacacttattttggaacggagggagtac 111
|||| ||||||||||||||||||| |||||||||||||
Sbjct: 42 actaggcttgagacacttattttgagacggagggagtac 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 10 catgtactccctccgtctcaaaataactgtctcaa 44
|||||||||||||||||||||||||| ||||||||
Sbjct: 1 catgtactccctccgtctcaaaataagtgtctcaa 35
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 83 agacacttattttggaacggagggagtac 111
||||||||||||||| |||||||||||||
Sbjct: 74 agacacttattttgggacggagggagtac 102
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 115 bits (58), Expect = 1e-25
Identities = 89/98 (90%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 13 gtactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgt 72
||||||||||| || |||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 101 gtactccctccatcccaaaataactgtctcaactttgtactagctctagtacaaagttgt 42
Query: 73 actaagcttgagacacttattttggaacggagggagta 110
|| ||| |||||||| |||||||| ||||||||||||
Sbjct: 41 acaaag-ttgagacagttattttgagacggagggagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtac 52
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataactgtctcaactttgtac 43
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 107 bits (54), Expect = 3e-23
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 13 gtactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgt 72
||||||| |||||| |||||||| |||||||| ||| |||| |||||||| ||| ||||
Sbjct: 4 gtactccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaagttgt 63
Query: 73 actaagcttgagacacttattttggaacggagggagta 110
|||||| |||||||||||||||||| ||||||||||||
Sbjct: 64 actaaggttgagacacttattttgggacggagggagta 101
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 80 ttgagacacttattttggaacggagggagtact 112
|||||||||||||||||| ||||| ||||||||
Sbjct: 35 ttgagacacttattttgggacggaaggagtact 3
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaac 45
||||||||||||| |||||||| |||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaac 70
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 107 bits (54), Expect = 3e-23
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
|||||| |||||| |||||||| |||||||||||| |||||||| ||||| ||| |||||
Sbjct: 5 tactccatccgtcccaaaataagtgtctcaactttatactagctatagtacaaacttgta 64
Query: 74 ctaagcttgagacacttattttggaacggagggagtac 111
|||| |||||||| ||||||||| |||||||||||||
Sbjct: 65 ttaagtttgagacagttattttgggacggagggagtac 102
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tgtactccctccgtctcaaaataactgtctcaa 44
||||||||||||||| |||||||||||||||||
Sbjct: 103 tgtactccctccgtcccaaaataactgtctcaa 71
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 80 ttgagacacttattttggaacggagggagta 110
|||||||||||||||||| ||||| ||||||
Sbjct: 35 ttgagacacttattttgggacggatggagta 5
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 105 bits (53), Expect = 1e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
|||||||||| || |||||||| ||||||||||||||||||| ||||||| ||| |||||
Sbjct: 100 tactccctcc-tcccaaaataagtgtctcaactttgtactagttctagtacaaagttgta 42
Query: 74 ctaagcttgagacacttattttggaacggagggagta 110
||| |||||||||| ||||||||| |||||| |||||
Sbjct: 41 ctaggcttgagacagttattttgggacggagtgagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaa 44
||||| ||||||| |||||||||||||||||
Sbjct: 5 tactcactccgtcccaaaataactgtctcaa 35
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 101 bits (51), Expect = 2e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 28 caaaataactgtctcaactttgtactagctctagtataaaattgtactaagcttgagaca 87
|||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 87 caaaataagtgtctcaactttgtactagctctactacaaagttgtactaagcttgagaca 28
Query: 88 cttattttggaacggagggagta 110
|||||||| | ||||||||||
Sbjct: 27 gttattttgagatggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaa 44
|||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccatctcaaaataactgtctcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagta 110
|||||||||||||||||||| |||||||||
Sbjct: 71 ttgagacacttattttggaagagagggagta 101
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 88/101 (87%)
Strand = Plus / Plus
Query: 13 gtactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgt 72
|||||||||| || |||||||||||||| ||||||||||||||| || |||||| || |
Sbjct: 4 gtactccctctgttccaaaataactgtcttaactttgtactagctttactataaatttat 63
Query: 73 actaagcttgagacacttattttggaacggagggagtacta 113
|||||| || ||||| |||||||| |||||||||||||||
Sbjct: 64 actaagtttaagacatttattttgcgacggagggagtacta 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 83 agacacttattttggaacggagggagtacta 113
||||| |||||||||||| ||||||||||||
Sbjct: 32 agacagttattttggaacagagggagtacta 2
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 95.6 bits (48), Expect = 1e-19
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||
Sbjct: 5 tactccctccgtctcaaaataggtgtctcaactttaccctagctctagtataaagttgta 64
Query: 74 ctaagcttgagacacttattttgg 97
||||| |||||| | |||||||||
Sbjct: 65 ctaagtttgagaaagttattttgg 88
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 13 gtactccctccgtctcaaaataactgtc 40
|||||||||||||| |||||||||||||
Sbjct: 116 gtactccctccgtcccaaaataactgtc 89
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 89.7 bits (45), Expect = 8e-18
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 16 ctccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgtact 75
||||||||||| |||||||| ||||||||||||||||||||| || || ||| |||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttgtactagctttaatacaaagttgtact 66
Query: 76 aagcttgagacacttattttg 96
| |||||||||||||||||
Sbjct: 67 agagttgagacacttattttg 87
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 80 ttgagacacttattttggaacggagggag 108
|||||||||||||||||| ||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggag 7
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 89.7 bits (45), Expect = 8e-18
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
|||||||||| || |||||||| ||| | || |||||| ||||| ||||||||| || ||
Sbjct: 101 tactccctccatcccaaaataagtgtgttaattttgtattagctttagtataaagttata 42
Query: 74 ctaagcttgagacacttattttggaacggagggagta 110
||||| |||||||||||||||| ||||||| ||||||
Sbjct: 41 ctaagattgagacacttattttagaacggaaggagta 5
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 87.7 bits (44), Expect = 3e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
||||||||||||| ||||||||||||||||| ||||||||| || ||||| ||| |||||
Sbjct: 149 tactccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagttgta 90
Query: 74 ctaagcttgaga 85
||||| ||||||
Sbjct: 89 ctaaggttgaga 78
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 38 gtctcaactttgtactagctctagtataaaattgtactaagcttgagacacttattttgg 97
||||||||||||||||| | |||| ||| |||||||||| ||||||||||||||||||
Sbjct: 77 gtctcaactttgtactaaatttagtgcaaagttgtactaaggttgagacacttattttgg 18
Query: 98 aacggagggagtacta 113
||| |||||| ||||
Sbjct: 17 gacgaagggagaacta 2
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 79 cttgagacacttattttggaacggagggagta 110
||||||||| ||||||||| ||||||||||||
Sbjct: 118 cttgagacagttattttgggacggagggagta 149
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 87.7 bits (44), Expect = 3e-17
Identities = 87/100 (87%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
|||||||||||||||||||||| | ||| || ||| |||||||| |||| ||| || ||
Sbjct: 5 tactccctccgtctcaaaataagtttcttaattttatactagct-tagtgcaaagttata 63
Query: 74 ctaagcttgagacacttattttggaacggagggagtacta 113
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 64 ctaagcttgagacaattattttgagacggagggagtacta 103
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 13 gtactccctccgtctcaaaataactgtctcaa 44
||||||||||||||||||||||| ||||||||
Sbjct: 101 gtactccctccgtctcaaaataattgtctcaa 70
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
|||||||||| || |||||||| |||||||||||||||||| || ||||| ||| |||||
Sbjct: 108 tactccctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagttgta 49
Query: 74 ctaagct 80
|||||||
Sbjct: 48 ctaagct 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagta 110
|||||||||||||||||| | ||||||||||
Sbjct: 78 ttgagacacttattttgggatggagggagta 108
>RF00906;MIR1122;AY268139.1/69673-69778 4513:Hordeum vulgare
Length = 106
Score = 67.9 bits (34), Expect = 3e-11
Identities = 83/98 (84%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 73
|||| ||||||||||||||||||||||| |||||| || || | ||||||||||||||
Sbjct: 102 tacttcctccgtctcaaaataactgtcttaactttatattaatttcagtataaaattgta 43
Query: 74 -ctaagcttgagacacttattttggaacggagggagta 110
|||| || | ||| |||||||| |||||||||||||
Sbjct: 42 tttaagtttaaaacagttattttgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgt 39
|||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcaaaataactgt 30
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 63.9 bits (32), Expect = 5e-10
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaatt-gt 72
|||||||||||| |||||| || ||||||||||||||| || ||||| |||||| ||
Sbjct: 101 tactccctccgttctaaaatagatgactcaactttgtactaactatagtacaaaattagt 42
Query: 73 actaagcttgagacacttattttggaacggagggagtact 112
|| ||| ||||| || |||||||||||||||||||||||
Sbjct: 41 acaaag-ttgagtcatctattttggaacggagggagtact 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 13 gtactccctccgtctcaaaataactgtctcaactttgtacta 54
||||||||||||| ||||||| || |||||||||||||||
Sbjct: 4 gtactccctccgttccaaaatagatgactcaactttgtacta 45
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 60.0 bits (30), Expect = 7e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 81 tgagacacttattttggaacggagggagta 110
||||||||||||||||||||||||||||||
Sbjct: 101 tgagacacttattttggaacggagggagta 130
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 58.0 bits (29), Expect = 3e-08
Identities = 85/100 (85%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactg--tctcaactttgtactagctctagtataaaatt- 70
||||||||||||| |||||||| || |||||||||| ||||| | ||||| ||||||
Sbjct: 5 tactccctccgtcccaaaataagtggatctcaactttatactatttttagtacaaaatta 64
Query: 71 gtactaagcttgagacacttattttggaacggagggagta 110
|||| ||| ||||| ||||||||| || ||||||||||||
Sbjct: 65 gtacaaag-ttgagtcacttatttcgggacggagggagta 103
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtacta 54
||||||||||||| | |||||| || |||||||||||||||
Sbjct: 103 tactccctccgtcccgaaataagtgactcaactttgtacta 63
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtacta 54
||||||||||||| |||||||| || |||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgactcaactttgtacta 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagta 110
||||| |||||||||||| ||||||||||||
Sbjct: 70 ttgagtcacttattttgggacggagggagta 100
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtacta 54
||||||||||||| |||||||| || |||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgactcaactttgtacta 45
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 80 ttgagacacttattttggaacggagggagta 110
||||| |||||||||||| ||||||||||||
Sbjct: 35 ttgagtcacttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 12 tgtactccctccgtctcaaaataactgtctcaactttgtacta 54
||||||| |||| || |||||||| || |||||||||||||||
Sbjct: 130 tgtactcgctccatcccaaaataagtgactcaactttgtacta 88
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 59 tagtataaaattgtactaagcttgagacacttattttggaacggagggagta 110
|||||||| |||||||||| |||||||||||||||||| ||||||| ||||
Sbjct: 39 tagtataactttgtactaag-ttgagacacttattttgggacggaggaagta 89
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 59 tagtataaaattgtactaagcttgagacacttattttggaacggagggag 108
||||| ||| || |||||| |||||||||||||||||| ||||||||||
Sbjct: 56 tagtacaaagttatactaaagttgagacacttattttgggacggagggag 7
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 16 ctccctccgtctcaaaataactgtctcaacttt 48
||||||||||| |||||||| ||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaacttt 39
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtac 52
|||| |||||||| |||||||| ||||||||||| ||||
Sbjct: 89 tacttcctccgtcccaaaataagtgtctcaacttagtac 51
>RF00906;MIR1122;AY137517.1/5819-5912 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 94
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 84 gacacttattttggaacggagggagtactac 114
||||||||||||||| |||||||||||||||
Sbjct: 64 gacacttattttggatcggagggagtactac 94
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtct-caactttgtacta 54
||||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctccaactttgtacta 46
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 82 gagacacttattttggaacggagggagta 110
|||||||||||||||| ||||||||||||
Sbjct: 33 gagacacttattttgggacggagggagta 5
>RF00906;MIR1122;EU730897.1/72285-72181 15368:Brachypodium
distachyon
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 69 ttgtactaagcttgagacacttattttggaacggagggagta 110
|||||||||| ||||||||||||| |||| |||||||||||
Sbjct: 60 ttgtactaagtctgagacacttattatggatcggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 82 gagacacttattttggaacggagggagtact 112
|||||||||||| |||| |||||||||||||
Sbjct: 33 gagacacttattatggatcggagggagtact 3
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtacta 54
||||||||| ||| |||||||| || |||||||||||||||
Sbjct: 5 tactccctctgtcccaaaataagtgactcaactttgtacta 45
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 13 gtactccctccgtctcaaaataactgtctcaactttgtactagctctagta 63
|||||||||||||| |||| ||| || ||||||||| ||||| || |||||
Sbjct: 91 gtactccctccgtcccaaattaagtgactcaactttatactaactttagta 41
>RF00906;MIR1122;AP008213.1/28683389-28683301 39947:Oryza sativa
Japonica Group
Length = 89
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 86 cacttattttggaacggagggagta 110
|||||||||||||||||||||||||
Sbjct: 61 cacttattttggaacggagggagta 85
>RF00906;MIR1122;AC148487.14/40672-40806 3880:Medicago truncatula
(barrel medic)
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atgtactccctccgtctcaaaata 34
||||||||||||||||||||||||
Sbjct: 2 atgtactccctccgtctcaaaata 25
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagtac 111
||||| |||||||||||| |||||||||||||
Sbjct: 81 ttgagtcacttattttgggacggagggagtac 112
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 86 cacttattttggaacggagggagtacta 113
|||||||||||| |||||||||||||||
Sbjct: 87 cacttattttgggacggagggagtacta 114
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 71 gtactaagcttgagacacttattttggaacggagggagta 110
||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 44 gtactaaatttgcgacacttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 84 gacacttattttggaacggagggagta 110
|||||||||||||| ||||||||||||
Sbjct: 76 gacacttattttgggacggagggagta 102
>RF00906;MIR1122;AAAA02026943.1/18413-18317 39946:Oryza sativa
Indica Group
Length = 97
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 tgtactccctccgtctcaaaataa 35
||||||||||||||||||||||||
Sbjct: 95 tgtactccctccgtctcaaaataa 72
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 12 tgtactccctccgtctcaaaataactgtctcaactttgtacta 54
||||||| ||| ||| |||||||| || |||||||||||||||
Sbjct: 99 tgtactcgctctgtcccaaaataagtgactcaactttgtacta 57
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 84 gacacttattttggaacggagggagta 110
|||||||||||||||||||| ||||||
Sbjct: 31 gacacttattttggaacggaaggagta 5
>RF00906;MIR1122;EU626553.1/80133-80237 4572:Triticum urartu
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 90 tattttggaacggagggagtact 112
|||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtact 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 tattttggaacggagggagtac 111
||||||||||||||||||||||
Sbjct: 81 tattttggaacggagggagtac 102
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagta 110
||||| |||||||||||| ||||||||||||
Sbjct: 82 ttgagtcacttattttgggacggagggagta 112
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa Japonica
Group
Length = 246
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 86 cacttattttggaacggagggagtac 111
|||||||||||| |||||||||||||
Sbjct: 26 cacttattttgggacggagggagtac 1
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa Japonica
Group
Length = 247
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 85 acacttattttggaacggagggagta 110
||||||||||||| ||||||||||||
Sbjct: 27 acacttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02021561.1/35714-35484 39946:Oryza sativa
Indica Group
Length = 231
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataa 35
||||||||||||||||||||||
Sbjct: 2 tactccctccgtctcaaaataa 23
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgta 51
||||||||||||| |||| ||| || ||||||||||||
Sbjct: 5 tactccctccgtcccaaattaagtgactcaactttgta 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 80 ttgagacacttattttggaacggagggagtacta 113
||||| |||||| ||||| |||||||||||||||
Sbjct: 83 ttgagtcacttaatttgggacggagggagtacta 116
>RF00906;MIR1122;AY465427.2/1983-1848 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 90 tattttggaacggagggagtac 111
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtac 4
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagta 63
|||| ||||||| |||||||| || ||||||||||||||| || |||||
Sbjct: 90 tacttcctccgtttcaaaatagatgactcaactttgtactaactttagta 41
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaa 67
|||||||||||| ||||||| || ||||||||||||||| || |||| ||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttgtactaactttagtgtaaa 58
>RF00906;MIR1122;EU660894.1/143713-143848 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 tattttggaacggagggagtac 111
||||||||||||||||||||||
Sbjct: 112 tattttggaacggagggagtac 133
>RF00906;MIR1122;EF059989.1/239319-239424 29664:Brachypodium
sylvaticum
Length = 106
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 84 gacacttattttggaacggagggagtacta 113
|||||||||| |||| ||||||||||||||
Sbjct: 31 gacacttattatggatcggagggagtacta 2
>RF00906;MIR1122;EU730898.1/15478-15583 15368:Brachypodium
distachyon
Length = 106
Score = 44.1 bits (22), Expect = 4e-04
Identities = 56/66 (84%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 46 tttgtactagctctagtataaaattgtactaagcttgagacacttattttggaacggagg 105
||||||||| || ||||||||| ||||||||| ||| ||||||||| | || ||||||
Sbjct: 68 tttgtactaact-tagtataaagttgtactaaatctgaaacacttattatcgatcggagg 10
Query: 106 gagtac 111
||||||
Sbjct: 9 gagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 tgagacacttattttggaacggagggagta 110
||||||||||||| |||| |||||||||||
Sbjct: 73 tgagacacttattatggatcggagggagta 102
>RF00906;MIR1122;EU730894.1/50807-50703 15368:Brachypodium
distachyon
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 tgagacacttattttggaacggagggagta 110
|||||||||||||||||| |||||| ||||
Sbjct: 72 tgagacacttattttggatcggaggcagta 101
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgtctcaaaataa 35
||||||||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataa 26
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgtctcaaaataa 35
||||||||||||||||||||||
Sbjct: 116 tactccctccgtctcaaaataa 95
>RF00906;MIR1122;AAAA02028034.1/27580-27414 39946:Oryza sativa
Indica Group
Length = 167
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 gtactccctccgtctcaaaata 34
||||||||||||||||||||||
Sbjct: 4 gtactccctccgtctcaaaata 25
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 gtactccctccgtctcaaaataactg 38
|||||||||||||| |||||||||||
Sbjct: 4 gtactccctccgtcccaaaataactg 29
