miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 125 bits (63), Expect = 2e-28
Identities = 82/87 (94%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||| | |||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 99 actccctccgtcccaaaataagtgactcaactttgtactaaagttagtgcaaagttgagt 40
Query: 101 c-tttttgagtcacttattttgggacg 126
| |||||||||||||||||||||||||
Sbjct: 39 cgtttttgagtcacttattttgggacg 13
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
|||||||||||||||||||||||||||||||
Sbjct: 70 ttgagtcacttattttgggacggagggagta 100
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 89.7 bits (45), Expect = 1e-17
Identities = 70/77 (90%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 60 aagtgactcaattttgtactaaagttagtgcaaacttgagtc-tttttgagtcacttatt 118
||||||||||| || |||||||||||||| |||| |||||| |||||||||||||||||
Sbjct: 81 aagtgactcaacttcgtactaaagttagtacaaagttgagtgatttttgagtcacttatt 22
Query: 119 ttgggacggagggagta 135
||||||| |||||||||
Sbjct: 21 ttgggacagagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 65 actcaattttgtactaaagttagtgcaaacttgagtct-ttttgagtcacttattttggg 123
|||||| |||||||||| ||||| | || ||||||| |||||||||||||||||||||
Sbjct: 41 actcaactttgtactaactttagtacgaagttgagtcacttttgagtcacttattttggg 100
Query: 124 acggagggagta 135
||||||||||||
Sbjct: 101 acggagggagta 112
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 85.7 bits (43), Expect = 2e-16
Identities = 69/75 (92%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 63 tgactcaattttgtactaaagttagtgcaaacttgagtc-tttttgagtcacttattttg 121
|||||||| |||||||||| ||||||| ||| | ||||| ||||||||||||||||||||
Sbjct: 39 tgactcaactttgtactaa-gttagtgtaaattggagtcatttttgagtcacttattttg 97
Query: 122 ggacggagggagtac 136
|||||||||||||||
Sbjct: 98 ggacggagggagtac 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 84 ttagtgcaaacttgagtc-tttttgagtcacttattttgggacggaggga 132
||||| |||| ||||||| |||||||||||||||||||||||| ||||||
Sbjct: 57 ttagtacaaagttgagtcatttttgagtcacttattttgggacagaggga 8
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaa 70
||||||||||| | ||||||||||||||||
Sbjct: 110 actccctccgtcccaaaataagtgactcaa 81
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 73.8 bits (37), Expect = 7e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 69 aattttgtactaaagttagtgcaaacttgagtc-tttttgagtcacttattttgggacgg 127
|||||| || ||||||||||| ||| |||| || ||||| ||||||||||||||||||||
Sbjct: 44 aattttatagtaaagttagtgtaaagttgactcatttttcagtcacttattttgggacgg 103
Query: 128 agggagtac 136
|||||||||
Sbjct: 104 agggagtac 112
Score = 50.1 bits (25), Expect = 1e-05
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 102 tttttgagtcacttattttgggacggagggagtacat 138
||||||||||| || ||||||||||||||||||||||
Sbjct: 37 tttttgagtcattt-ttttgggacggagggagtacat 2
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
|||||||| || | |||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct: 6 actccctctgtcccaaaataagtgactcaactttgtactaaagttagtataaagttgagt 65
Query: 101 c 101
|
Sbjct: 66 c 66
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||||||||||||||||||| |||||||||
Sbjct: 35 ttgagtcacttattttgggacagagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||| | ||| |||||||||||| ||| |||||| ||||| |||| ||||||
Sbjct: 89 actccctccgtcccaaattaagtgactcaactttatactaactttagtacaaagttgagt 30
Query: 101 c 101
|
Sbjct: 29 c 29
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 105 ttgagtcacttattttgggacggagggagta 135
|||||||||||||||||||||||||||||||
Sbjct: 35 ttgagtcacttattttgggacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaa 81
||||||||||| | |||||||||||||||| ||||||||||
Sbjct: 6 actccctccgtcccaaaataagtgactcaactttgtactaa 46
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagtaca 137
|||||||||||||||||||| |||| |||||||
Sbjct: 98 ttgagtcacttattttgggatggagcgagtaca 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 55 aaaataagtgactcaattttgtactaa 81
|||||||||||||||| ||||||||||
Sbjct: 113 aaaataagtgactcaactttgtactaa 87
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||| ||||||| |||||| |||| ||| ||||||||||||||||| |||| ||||||
Sbjct: 6 actccttccgttccaaaatagatgacccaactttgtactaaagttagtacaaagttgagt 65
Query: 101 c 101
|
Sbjct: 66 c 66
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagtac 136
|||||||||||| |||||||||||||||||||
Sbjct: 83 ttgagtcacttaatttgggacggagggagtac 114
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 105 ttgagtcacttattttgggacggagggagta 135
|||||||||||| ||||||||||||||||||
Sbjct: 35 ttgagtcacttaatttgggacggagggagta 5
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtacta 80
||||||||||||| |||||||||| ||||| |||||||||
Sbjct: 6 actccctccgttccaaaataagtgtctcaaatttgtacta 45
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 104 tttgagtcacttattttgggacggagggagta 135
|||||| |||||||||||| ||||||||||||
Sbjct: 36 tttgagacacttattttggaacggagggagta 5
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||||||||||||| |||||||||||||||
Sbjct: 73 ttgagtcacttatttcgggacggagggagta 103
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaa 81
||||||||||| | ||||||||||||||| ||||||||||
Sbjct: 102 actccctccgtcccgaaataagtgactcaactttgtactaa 62
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| |||||||||||||||||||||||||
Sbjct: 71 ttgagacacttattttgggacggagggagta 101
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 105 ttgagtcacttattttgggacggagggagtac 136
||||| |||||||||||||||||| |||||||
Sbjct: 35 ttgagacacttattttgggacggaaggagtac 4
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| |||||||||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 106 tgagtcacttattttgggacggagggagta 135
|||| |||||||||||||||||||||||||
Sbjct: 71 tgagacacttattttgggacggagggagta 100
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagtacatc 139
||||| || ||||||||||||||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagtacatc 105
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| |||||||||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| |||||||||||||||||||||||||
Sbjct: 71 ttgagacacttattttgggacggagggagta 101
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtacta 80
||||||||||| | |||||||||| ||||| |||||||||
Sbjct: 100 actccctccgtcccaaaataagtgtctcaactttgtacta 61
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| |||||||||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| || ||||||||||||||||||||||
Sbjct: 71 ttgagacatttattttgggacggagggagta 101
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| |||||||||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| || ||||||||||||||||||||||
Sbjct: 71 ttgagacatttattttgggacggagggagta 101
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 54.0 bits (27), Expect = 7e-07
Identities = 82/99 (82%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttg-ag 99
||||||||||| | |||||||||| || || |||||||||| ||||| |||| ||| |
Sbjct: 100 actccctccgtcccaaaataagtgtcttaactttgtactaactttagtacaaagttgtac 41
Query: 100 tctttttgagtcacttattttgggacggagggagtacat 138
| ||||| ||||||||||| ||||||||||||||||
Sbjct: 40 taggcttgagacacttattttgagacggagggagtacat 2
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagtac 136
||||||||||||||||||||||||||
Sbjct: 77 cacttattttgggacggagggagtac 102
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa Japonica
Group
Length = 246
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagtac 136
||||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagtac 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagtac 136
|||||||||||||||||||| |||||
Sbjct: 221 cacttattttgggacggaggtagtac 246
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 104 tttgagtcacttattttgggacggagggagtaca 137
|||||| || ||||||||||||||||||||||||
Sbjct: 70 tttgagacagttattttgggacggagggagtaca 103
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| |||||||||||||||||| ||||||
Sbjct: 35 ttgagacacttattttgggacggatggagta 5
>RF00906;MIR1122;AF427791.1/40179-40064 4513:Hordeum vulgare
Length = 116
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 102 tttttgagtcacttattttgggacggagggagta 135
|||||||||||||||||||| ||||||| |||||
Sbjct: 38 tttttgagtcacttattttgagacggagagagta 5
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 36 ataccactccctccgttcaaaaataagtgactcaattttgtactaa 81
|||| ||||||||||||| |||||| |||||||| ||||||||||
Sbjct: 105 atactactccctccgttctaaaatagatgactcaactttgtactaa 60
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaa 81
||||||||||||| |||||| |||||||| ||||||||||
Sbjct: 6 actccctccgttccaaaatagatgactcaactttgtactaa 46
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 220 cacttattttgggacggagggagta 244
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa Japonica
Group
Length = 247
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 221 cacttattttgggacggagggagta 245
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagta 240
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagta 240
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa Indica
Group
Length = 243
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagtac 136
|||||||||||||||||||| |||||
Sbjct: 218 cacttattttgggacggaggtagtac 243
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa Japonica
Group
Length = 245
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagtac 136
|||||||||||||||||||| |||||
Sbjct: 220 cacttattttgggacggaggtagtac 245
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagta 240
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagta 240
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 105 ttgagtcacttattttgggacggagggag 133
||||| |||||||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggag 7
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagtaca 137
||||||||||||||||||||| ||| |||||||
Sbjct: 67 ttgagtcacttattttgggacagagcgagtaca 99
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 55 aaaataagtgactcaattttgtactaa 81
|||||||||||||||| ||||||||||
Sbjct: 82 aaaataagtgactcaactttgtactaa 56
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 105 ttgagtcacttattttgggacggagggag 133
||||| |||||||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggag 7
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| |||||||||||||||||||| ||||
Sbjct: 59 ttgagacacttattttgggacggaggaagta 89
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 109 gtcacttattttgggacggagggagtac 136
||||||||||||||||| ||||||||||
Sbjct: 38 gtcacttattttgggacagagggagtac 65
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 45 cctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagtc 101
||||| ||| |||||| |||| ||| ||||||||||||||||| |||| |||||||
Sbjct: 10 cctccattccaaaatagatgacccaactttgtactaaagttagtacaaagttgagtc 66
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagtaca 137
||||| |||||||||||||| ||||||||||||
Sbjct: 71 ttgagacacttattttgggatggagggagtaca 103
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaa 81
||||||||||||| |||||| |||||||| ||||||||||
Sbjct: 6 actccctccgttccaaaatagatgactcaactttgtactaa 46
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||||| |||||| |||| ||| ||| |||||||||||| |||| ||||||
Sbjct: 89 actccctccgttccaaaatagatgacccaactttacactaaagttagtacaaagttgagt 30
Query: 101 c 101
|
Sbjct: 29 c 29
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagta 5
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 78 cacttattttgggacggagggagta 102
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| |||||||||||||| ||||||||||
Sbjct: 78 ttgagacacttattttgggatggagggagta 108
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagta 135
|||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagta 5
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 tttgtactaaagttagtgcaaacttgag 99
||||||||||||||||| ||||||||||
Sbjct: 96 tttgtactaaagttagtacaaacttgag 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| || ||||||||||||||||||||||
Sbjct: 119 ttgagacagttattttgggacggagggagta 149
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagtacat 138
||||||||||||||| ||||||||||||
Sbjct: 78 cacttattttgggaccgagggagtacat 105
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 attttgggacggagggagtacatc 139
||||||||||||||||||||||||
Sbjct: 113 attttgggacggagggagtacatc 136
>RF00906;MIR1122;FJ234838.1/106075-106199 29664:Brachypodium
sylvaticum
Length = 125
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 104 tttgagtcacttattttgggacggagggagta 135
||||||||||||| | ||||||||||||||||
Sbjct: 36 tttgagtcacttaatatgggacggagggagta 5
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 104 tttgagtcacttattttgggacggagggagta 135
||||||||||||| | ||||||||||||||||
Sbjct: 91 tttgagtcacttaatatgggacggagggagta 122
>RF00906;MIR1122;EF059989.1/24895-24770 29664:Brachypodium
sylvaticum
Length = 126
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 108 agtcacttattttgggacggagggagta 135
||||||||| ||||||||||||||||||
Sbjct: 32 agtcacttaatttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 104 tttgagtcacttattttgggacggagggagta 135
||||||||||||| | ||||||||||||||||
Sbjct: 91 tttgagtcacttaatatgggacggagggagta 122
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 112 acttattttgggacggagggagta 135
||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagta 5
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtacat 138
||||||||||||||||||||||||
Sbjct: 98 tattttgggacggagggagtacat 121
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa Japonica
Group
Length = 97
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 113 cttattttgggacggagggagtac 136
||||||||||||||||||||||||
Sbjct: 71 cttattttgggacggagggagtac 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 113 cttattttgggacggagggagta 135
|||||||||||||||||||||||
Sbjct: 27 cttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02011966.1/4807-4962 39946:Oryza sativa Indica
Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtacat 138
||||||||||||||||||||||||
Sbjct: 132 tattttgggacggagggagtacat 155
>RF00906;MIR1122;AACV01003177.1/25234-25117 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 115 tattttgggacggagggagtacat 138
||||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtacat 2
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtacat 138
||||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtacat 111
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 113 cttattttgggacggagggagta 135
|||||||||||||||||||||||
Sbjct: 24 cttattttgggacggagggagta 2
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 113 cttattttgggacggagggagta 135
|||||||||||||||||||||||
Sbjct: 24 cttattttgggacggagggagta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagtac 136
|||||||||||||||||||||||
Sbjct: 215 ttattttgggacggagggagtac 237
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 113 cttattttgggacggagggagta 135
|||||||||||||||||||||||
Sbjct: 217 cttattttgggacggagggagta 239
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 63 tgactcaattttgtactaaagttagtgcaaacttgagtc 101
|||||||| |||||||||||| |||| |||| |||||||
Sbjct: 28 tgactcaactttgtactaaagatagtacaaagttgagtc 66
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 116 attttgggacggagggagtacat 138
|||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtacat 2
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagtac 136
|||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagtac 4
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagtac 136
|||||||||||||||||||||||
Sbjct: 94 ttattttgggacggagggagtac 116
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| || ||||||||||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagta 101
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagtac 136
|||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagtac 4
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| || ||||||||||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagta 101
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;EF059989.1/365637-365513 29664:Brachypodium
sylvaticum
Length = 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 104 tttgagtcacttattttgggacggagggagtacat 138
||||||||||||| | | |||||||||||||||||
Sbjct: 36 tttgagtcacttaatataggacggagggagtacat 2
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagtac 136
|||||||||||||||||||||||
Sbjct: 88 ttattttgggacggagggagtac 110
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagtac 136
|||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagtac 4
>RF00906;MIR1122;AAAA02010753.1/12998-13107 39946:Oryza sativa
Indica Group
Length = 110
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 ttttgggacggagggagtacatc 139
|||||||||||||||||||||||
Sbjct: 88 ttttgggacggagggagtacatc 110
>RF00906;MIR1122;AACV01021306.1/37655-37776 39947:Oryza sativa
Japonica Group
Length = 122
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtaca 137
|||||||||||||||||||||||
Sbjct: 98 tattttgggacggagggagtaca 120
>RF00906;MIR1122;AAAA02006215.1/494-605 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtaca 137
|||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtaca 110
>RF00906;MIR1122;AAAA02012151.1/19064-18908 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtaca 137
|||||||||||||||||||||||
Sbjct: 133 tattttgggacggagggagtaca 155
>RF00906;MIR1122;AP002537.2/68809-68701 39947:Oryza sativa Japonica
Group
Length = 109
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 117 ttttgggacggagggagtacatc 139
|||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtacatc 1
>RF00906;MIR1122;AAAA02034673.1/6609-6720 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtaca 137
|||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtaca 110
>RF00906;MIR1122;AACV01006104.1/16306-16436 39947:Oryza sativa
Japonica Group
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 117 ttttgggacggagggagtacatc 139
|||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtacatc 1
>RF00906;MIR1122;AP008209.1/27314174-27314047 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 115 tattttgggacggagggagtaca 137
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtaca 3
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagtac 136
|||||||||||||||||||||||
Sbjct: 72 ttattttgggacggagggagtac 94
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagtac 136
|||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagtac 4
>RF01058;MIR806;AACV01007528.1/40785-40545 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 cacttattttgggacggagggagtac 136
|||||||||| |||||||||||||||
Sbjct: 216 cacttattttaggacggagggagtac 241
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 106 tgagtcacttattttgggacggagggagta 135
|||| |||||||||||| ||||||||||||
Sbjct: 101 tgagacacttattttggaacggagggagta 130
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 116 attttgggacggagggagtaca 137
||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaca 3
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggaggga 132
||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggaggga 8
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagtacat 138
||||| || ||||||||||||||||| |||||||
Sbjct: 71 ttgagacagttattttgggacggaggaagtacat 104
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 80 ttattttgggacggagggagta 101
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagtac 136
||||||||||| ||||||||||||||
Sbjct: 29 cacttattttgagacggagggagtac 4
>RF00906;MIR1122;EU730899.1/86003-86096 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 110 tcacttattttgggacggaggg 131
||||||||||||||||||||||
Sbjct: 65 tcacttattttgggacggaggg 86
>RF00906;MIR1122;AAAA02002553.1/2264-2375 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtac 109
>RF00906;MIR1122;AAAA02031697.1/13340-13228 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 89 tattttgggacggagggagtac 110
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa Indica
Group
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 111 ttattttgggacggagggagta 132
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 135 ttattttgggacggagggagta 156
>RF00906;MIR1122;AP003725.3/107083-106927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 111 tattttgggacggagggagtac 132
>RF00906;MIR1122;AAAA02033081.1/3802-3711 39946:Oryza sativa Indica
Group
Length = 92
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 97 ttattttgggacggagggagta 118
>RF00906;MIR1122;AC090873.4/89374-89493 4530:Oryza sativa (rice)
Length = 120
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 89 tattttgggacggagggagtac 110
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 78 ttattttgggacggagggagta 99
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02006623.1/10234-10353 39946:Oryza sativa
Indica Group
Length = 120
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 96 tattttgggacggagggagtac 117
>RF00906;MIR1122;AP005586.3/39119-39252 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 110 tattttgggacggagggagtac 131
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 92 ttattttgggacggagggagta 113
>RF00906;MIR1122;CT832702.1/1285-1384 39946:Oryza sativa Indica
Group
Length = 100
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 76 tattttgggacggagggagtac 97
>RF00906;MIR1122;AP003267.3/20551-20679 39947:Oryza sativa Japonica
Group
Length = 129
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 105 tattttgggacggagggagtac 126
>RF00906;MIR1122;AAAA02015207.1/7418-7517 39946:Oryza sativa Indica
Group
Length = 100
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AP008209.1/11046117-11046191 39947:Oryza sativa
Japonica Group
Length = 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 ttttgggacggagggagtacat 138
||||||||||||||||||||||
Sbjct: 53 ttttgggacggagggagtacat 74
>RF00906;MIR1122;AL606632.5/91694-91591 4530:Oryza sativa (rice)
Length = 104
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 117 ttttgggacggagggagtacat 138
||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtacat 2
>RF00906;MIR1122;AAAA02010499.1/21534-21382 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AAAA02016947.1/4733-4836 39946:Oryza sativa Indica
Group
Length = 104
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AP004994.2/80471-80627 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 133 tattttgggacggagggagtac 154
>RF00906;MIR1122;AACV01002422.1/2768-2895 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 ttttgggacggagggagtacat 138
||||||||||||||||||||||
Sbjct: 106 ttttgggacggagggagtacat 127
>RF00906;MIR1122;AACV01013954.1/10702-10856 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 131 tattttgggacggagggagtac 152
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 88 ttattttgggacggagggagta 109
>RF00906;MIR1122;AK108711.1/3-158 39947:Oryza sativa Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 111 cacttattttgggacggagggagtac 136
||||||| ||||||||||||||||||
Sbjct: 29 cacttatattgggacggagggagtac 4
>RF00906;MIR1122;AP008210.1/24813715-24813809 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 71 tattttgggacggagggagtac 92
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 104 ttattttgggacggagggagta 125
>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AC120987.2/63054-63157 39947:Oryza sativa Japonica
Group
Length = 104
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 80 tattttgggacggagggagtac 101
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tattttgggacggagggagtac 136
||||||||||||||||||||||
Sbjct: 116 tattttgggacggagggagtac 137
