miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01062;MIR812;AACV01002616.1/34373-34543 39947:Oryza sativa
Japonica Group
Length = 171
Score = 278 bits (140), Expect = 4e-74
Identities = 161/171 (94%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 gttttcgcgccaaactttaatcgcccgtcttatttaaaattttttataattagcattttt 112
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 52
Query: 181 tttnnnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 51 tttaaaaaaaaatttaaataaaacgaatggtcaaagttgggcgcggaaaac 1
>RF01062;MIR812;AAAA02004189.1/13863-13695 39946:Oryza sativa Indica
Group
Length = 169
Score = 220 bits (111), Expect = 8e-57
Identities = 120/123 (97%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
|||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 169 gtttccgcgtccaactttaatcgtccgtcttatttaaaattttttataattagcattttt 110
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 50
Query: 181 ttt 183
|||
Sbjct: 49 ttt 47
>RF01058;MIR806;AACV01005957.1/12052-12292 39947:Oryza sativa
Japonica Group
Length = 241
Score = 214 bits (108), Expect = 5e-55
Identities = 199/231 (86%), Gaps = 1/231 (0%)
Strand = Plus / Plus
Query: 27 tactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgccc 86
|||||||||||||||| |||||||||| | ||||||| |||| |||||||| |||| |
Sbjct: 2 tactacctccgtcccaaaataagtacagccgtgagtttccgcgtccaactttgatcgttc 61
Query: 87 gtcttatttaaaatttt-ttataattagcatttttgttgttataagatgataaaacatga 145
|| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gttttatttgaaatttttttataattagcatttttgttgttataagatgataaaacatga 121
Query: 146 atagtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaacg 205
||| ||||||||||||||||||| | |||| ||||||| || |||||||| |
Sbjct: 122 ataatactttactcgtgacttatgtttttattttttttcaaaaaattttcaaataaaatg 181
Query: 206 aatggtcaaagttgggcgcggaaaaccatgactgcatttattttgggacgg 256
||||||||||||||||||| |||||| ||| ||||| || |||||||||||
Sbjct: 182 aatggtcaaagttgggcgctgaaaactatggctgcacttgttttgggacgg 232
Score = 52.0 bits (26), Expect = 4e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 196 aaataaaacgaatggtcaaagttgggcgcggaaaaccatgactgcatttattttgggacg 255
|||||||||||| | |||||||||| |||||||| || | ||| | |||||||||||||
Sbjct: 70 aaataaaacgaacgatcaaagttggacgcggaaactcacggctgtacttattttgggacg 11
Query: 256 ga 257
||
Sbjct: 10 ga 9
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 200 bits (101), Expect = 8e-51
Identities = 198/232 (85%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 27 tactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgccc 86
|||||||||||||||| |||||| || ||||||||| |||||||| ||| |||| ||
Sbjct: 2 tactacctccgtcccaaaataagcgcagccatgagtttctgcgcccaattttgatcgtcc 61
Query: 87 gtcttatttaaaatttt-ttataattagcatttttgttgttataagatgataaaacatga 145
||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||||||| |
Sbjct: 62 gtcttatttgaaatttttttataattagcatttttattgttatgagatgataaaacataa 121
Query: 146 atagtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaacg 205
||||||||||||||||||||| | | |||| ||||||| || |||||| |||
Sbjct: 122 atagtactttactcgtgacttctgtttttaatttttttaaaaaagttttcaaataagacg 181
Query: 206 aatggtcaaagttgggcgcggaaaaccatgactgcatttattttgggacgga 257
|| |||||||||||||||| |||||||||| ||||| |||||||||||||||
Sbjct: 182 aacggtcaaagttgggcgcagaaaaccatggctgcacttattttgggacgga 233
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 192 bits (97), Expect = 2e-48
Identities = 197/232 (84%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 27 tactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgccc 86
||||||||||||| || ||||||| || ||||| ||||| ||| ||||||| |||| ||
Sbjct: 2 tactacctccgtctcaaaataagtgcagccatgaattttcacgcacaactttgatcgtcc 61
Query: 87 gtcttatttaaaatttt-ttataattagcatttttgttgttataagatgataaaacatga 145
||||||||| ||||||| ||||||||| |||||| |||||||||||||||||||| ||||
Sbjct: 62 gtcttatttgaaatttttttataattatcattttggttgttataagatgataaaatatga 121
Query: 146 atagtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaacg 205
| | ||||||||||||||||||| | |||| ||||||| || |||||| |||
Sbjct: 122 acaatactttactcgtgacttatgtttttaatttttttcaaaaatttttcaaataagacg 181
Query: 206 aatggtcaaagttgggcgcggaaaaccatgactgcatttattttgggacgga 257
|||| |||||||||| ||||||||| |||||||||| |||||||||||||||
Sbjct: 182 aatgatcaaagttggacgcggaaaatcatgactgcacttattttgggacgga 233
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 26 atactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgcc 85
||||| ||||||||||| ||||||| || |||||| ||| |||| |||||||| |||
Sbjct: 241 atactccctccgtcccaaaataagtgcagtcatgattttccgcgtccaactttgatcatt 182
Query: 86 cgtcttattt 95
||||||||||
Sbjct: 181 cgtcttattt 172
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 186 bits (94), Expect = 1e-46
Identities = 197/233 (84%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 26 atactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgcc 85
||||| ||||||||||| ||||||| || ||| ||||| ||||| |||||| |||| |
Sbjct: 1 atacttcctccgtcccaaaataagtgcagccataagtttccgcgcttaactttgatcgtc 60
Query: 86 cgtcttatttaaaatttt-ttataattagcatttttgttgttataagatgataaaacatg 144
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgtcttatttgaaatttttttataattagcatttttgttgttataagatgataaaacatg 120
Query: 145 aatagtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaac 204
|||||||||||||||||||||||| | |||| | ||||| || ||| || ||
Sbjct: 121 aatagtactttactcgtgacttatgtttttaatattttttaaaaaaatttcaaacaagac 180
Query: 205 gaatggtcaaagttgggcgcggaaaaccatgactgcatttattttgggacgga 257
||||||||||| || ||| |||||||| ||| |||| |||||||||||||||
Sbjct: 181 gaatggtcaaaattaggcacggaaaactatggttgcacttattttgggacgga 233
>RF01058;MIR806;AAAA02016915.1/1166-927 39946:Oryza sativa Indica
Group
Length = 240
Score = 184 bits (93), Expect = 5e-46
Identities = 186/220 (84%)
Strand = Plus / Plus
Query: 27 tactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgccc 86
|||||||||||||||| | |||| ||| ||| ||||| ||||||||| |||||||| |
Sbjct: 2 tactacctccgtcccattacaagtgcaaccataagtttccgcgcccaattttaatcgttc 61
Query: 87 gtcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaa 146
|||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||||||
Sbjct: 62 gtcttatttaaatttttttataattagtatttttattgttatgagatgataaaacatgaa 121
Query: 147 tagtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaacga 206
|||||||||||||||||||||||| |||| |||||| ||||||||| |||
Sbjct: 122 tagtactttactcgtgacttatatttttaaattttttcaaaaaatttttaaataagacgg 181
Query: 207 atggtcaaagttgggcgcggaaaaccatgactgcatttat 246
| ||| |||||||| |||||||||| ||| ||||| ||||
Sbjct: 182 acggttaaagttggacgcggaaaactatggctgcacttat 221
Score = 48.1 bits (24), Expect = 7e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaatttttt 105
|||| |||||||||| || ||||||||||||||| |||||
Sbjct: 200 cgcgtccaactttaaccgtccgtcttatttaaaaattttt 161
>RF01062;MIR812;AAHK01024291.1/515-686 5693:Trypanosoma cruzi
Length = 172
Score = 167 bits (84), Expect = 1e-40
Identities = 146/167 (87%), Gaps = 2/167 (1%)
Strand = Plus / Minus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaatt-ttttataattagcatttttgttg 124
||||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 166 cgcgctcaactttgatcgtccgtcttatttaaaattattttataattagcatttttgttg 107
Query: 125 ttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttttttn 184
||||||||| |||||||||||||||||||||||||||||||||| | |||| |||||||
Sbjct: 106 ttataagataataaaacatgaatagtactttactcgtgacttatgtttttaatttttttt 47
Query: 185 nnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
| |||||| ||||| |||||||||||||||||||||||
Sbjct: 46 aaaaaaaa-tcaaataatacgaacggtcaaagttgggcgcggaaaac 1
>RF01062;MIR812;AAAA02007969.1/1558-1388 39946:Oryza sativa Indica
Group
Length = 171
Score = 161 bits (81), Expect = 7e-39
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 88 tcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaat 147
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tcttatttaaaattttttttaattagcatttttgttgttataagatgataaaacatgaat 85
Query: 148 agtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaacgaa 207
||||||||||||||||||||| | |||| ||||||| || |||||| |||||
Sbjct: 84 agtactttactcgtgacttatgtttttaatttttttcaaaaaattttcaaataagacgaa 25
Query: 208 tggtcaaagttgggcgcggaaaac 231
||| |||||| ||||||||||||
Sbjct: 24 cggttaaagttaggcgcggaaaac 1
>RF01062;MIR812;AAAA02003190.1/914-1079 39946:Oryza sativa Indica
Group
Length = 166
Score = 159 bits (80), Expect = 3e-38
Identities = 110/120 (91%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
|||| |||| |||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 166 gtttccgcgtccaactttaatcatccgtcttatttaaaattttttataattagtattttt 107
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
|||||||||| ||||||||| |||||||||||||||||||||| |||||| |||| ||||
Sbjct: 106 gttgttataatatgataaaatatgaatagtactttactcgtgatttatatttttattttt 47
>RF01062;MIR812;AP008210.1/28165092-28164921 39947:Oryza sativa
Japonica Group
Length = 172
Score = 159 bits (80), Expect = 3e-38
Identities = 114/124 (91%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||||| |||||||| |||| |||| ||||||||| |||||| ||||||||||||||
Sbjct: 172 gttttcgcgtccaactttgatcgtccgttttatttaaattttttttataattagcatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |||
Sbjct: 112 tgttgttataagatgataaaacatggatattactttactcgtgacttatgtctttaattt 53
Query: 180 tttt 183
||||
Sbjct: 52 tttt 49
>RF01062;MIR812;AP008213.1/4933213-4933383 39947:Oryza sativa
Japonica Group
Length = 171
Score = 159 bits (80), Expect = 3e-38
Identities = 114/124 (91%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||||||||| ||||||| ||| ||||||||||||||||||||| |||||||||| |||
Sbjct: 171 gttttcgcgctcaactttgatcatccgtcttatttaaaatttttttataattagcaattt 112
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
|||||||||||||| |||||||||||||||||||||||||||||||||| | |||| |||
Sbjct: 111 tgttgttataagataataaaacatgaatagtactttactcgtgacttatgtttttaattt 52
Query: 180 tttt 183
||||
Sbjct: 51 tttt 48
>RF01062;MIR812;AACV01010650.1/39037-39206 39947:Oryza sativa
Japonica Group
Length = 170
Score = 155 bits (78), Expect = 4e-37
Identities = 141/165 (85%)
Strand = Plus / Minus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgt 125
||||| ||||||| |||| ||||||||||||| |||||||||||||| |||||||||||
Sbjct: 165 cgcgctcaactttgatcgtccgtcttatttaattttttttataattagtatttttgttgt 106
Query: 126 tataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttttttnn 185
||| ||||||||||| |||||||||||||||||| |||||||| | |||| |||||||
Sbjct: 105 tatgagatgataaaatatgaatagtactttactcatgacttatttttttaatttttttca 46
Query: 186 nnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaa 230
||||||||||||||||||| |||||||| | |||||||
Sbjct: 45 aaagaattttaaataaaacgaatggttaaagttggacacggaaaa 1
>RF01058;MIR806;AACV01007528.1/40785-40545 39947:Oryza sativa
Japonica Group
Length = 241
Score = 155 bits (78), Expect = 4e-37
Identities = 193/233 (82%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 26 atactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgcc 85
|||||||||||||| | ||||||| || |||| ||| |||| |||||||| | | |
Sbjct: 1 atactacctccgtcttaaaataagtgcagccatggttttccgcgtccaactttgactgtc 60
Query: 86 cgtcttatttaaaatttt-ttataattagcatttttgttgttataagatgataaaacatg 144
||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 61 cgttttatttaaaatttttttataattagcatttttgttgctatgagatgataaaacatg 120
Query: 145 aatagtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaac 204
|||||||||||||| ||||||||| | |||| ||||||| || |||||| ||
Sbjct: 121 aatagtactttacttgtgacttatgtttttaatttttttaaaaattttttcaaataagac 180
Query: 205 gaatggtcaaagttgggcgcggaaaaccatgactgcatttattttgggacgga 257
| ||||| |||||||||||||||||| ||| ||||| ||||||| |||||||
Sbjct: 181 ggatggttaaagttgggcgcggaaaaatatggctgcacttattttaggacgga 233
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 193 tttaaataaaacgaatggtcaaagttgggcgcggaaaaccatgactgcatttatttt 249
||||||||||||| | ||||||||||| |||||||||||||| ||||| |||||||
Sbjct: 73 tttaaataaaacggacagtcaaagttggacgcggaaaaccatggctgcacttatttt 17
>RF01062;MIR812;AACV01020594.1/1986-2157 39947:Oryza sativa Japonica
Group
Length = 172
Score = 153 bits (77), Expect = 2e-36
Identities = 129/148 (87%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataag 131
|||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||| ||
Sbjct: 159 aactttgatcgtccgtcttatttaaattttttttataattagcatttttgttgttatgag 100
Query: 132 atgataaaacatgaatagtactttactcgtgacttatatctttagtttttttnnnnnnnn 191
||||||||||||||||||||||||||||||||||||| | |||| |||||||
Sbjct: 99 atgataaaacatgaatagtactttactcgtgacttatgtttttaatttttttcaaaaaat 40
Query: 192 ntttaaataaaacgaatggtcaaagttg 219
||||||||| ||||| |||||||||||
Sbjct: 39 ttttaaataagacgaacggtcaaagttg 12
>RF01062;MIR812;AP008210.1/18494792-18494961 39947:Oryza sativa
Japonica Group
Length = 170
Score = 151 bits (76), Expect = 7e-36
Identities = 113/124 (91%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
|||| |||||| |||||| |||| ||||||||||| || |||||||||||||||||||||
Sbjct: 170 gtttccgcgcctaactttgatcgtccgtcttatttgaatttttttataattagcattttt 111
Query: 121 gttgttataagatgataaaa-catgaatagtactttactcgtgacttatatctttagttt 179
|||||||| ||||||||||| |||||||| ||||||||||||||||||||| |||| |||
Sbjct: 110 gttgttattagatgataaaaccatgaataatactttactcgtgacttatatttttaattt 51
Query: 180 tttt 183
||||
Sbjct: 50 tttt 47
>RF01062;MIR812;AP005158.3/28303-28131 39947:Oryza sativa Japonica
Group
Length = 173
Score = 151 bits (76), Expect = 7e-36
Identities = 113/124 (91%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||| |||||||| |||||||| ||||||| ||| || |||||| |||||||| |||||
Sbjct: 173 gtttttgcgcccaattttaatcgtccgtcttgtttgaattttttttataattagtatttt 114
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||
Sbjct: 113 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatgtttttaattt 54
Query: 180 tttt 183
||||
Sbjct: 53 tttt 50
>RF01062;MIR812;AY946444.1/29-199 4530:Oryza sativa (rice)
Length = 171
Score = 151 bits (76), Expect = 7e-36
Identities = 146/171 (85%), Gaps = 1/171 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| |||| |||||||| |||| |||||||||| ||||||||| ||||||||||||||
Sbjct: 171 gtttccgcgtccaactttgatcgttcgtcttatttgaaatttttttataattagcatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
|||| |||||||||||||||| ||||||||||||||||||||||||||| | |||| |||
Sbjct: 111 tgttattataagatgataaaatatgaatagtactttactcgtgacttatgtttttaattt 52
Query: 180 ttttnnnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaa 230
|||| || |||||| | ||||||||||||||||||| ||||||
Sbjct: 51 ttttcaaaaaactttcaaataagatgaatggtcaaagttgggcgtggaaaa 1
>RF01062;MIR812;AP008212.1/25992082-25992255 39947:Oryza sativa
Japonica Group
Length = 174
Score = 149 bits (75), Expect = 3e-35
Identities = 148/173 (85%), Gaps = 3/173 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| ||||||||||||| |||| | ||||||||| ||||||||| ||||||| || |||
Sbjct: 174 gtttccgcgcccaactttgatcgtctgtcttatttgaaatttttttataattaacaattt 115
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||
Sbjct: 114 tgttgttataagatgataaaatatgaatagtactttactcgtgacttatgtttttatttt 55
Query: 180 ttttnnnnnnnnnttt--aaataaaacgaatggtcaaagttgggcgcggaaaa 230
|||| ||| |||||| |||||||||||||||||||||| |||||
Sbjct: 54 ttttttcaaatttttttcaaataagacgaatggtcaaagttgggcgctgaaaa 2
>RF01062;MIR812;AAAA02001058.1/3820-3989 39946:Oryza sativa Indica
Group
Length = 170
Score = 149 bits (75), Expect = 3e-35
Identities = 112/123 (91%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
|||||||||||||||||| |||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 170 gttttcgcgcccaactttgatcgtccgtcttatttgaa-ttttttataattagtattttt 112
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
||||||||||||||||||||||||||||||| |||||||||||| || | |||| ||||
Sbjct: 111 gttgttataagatgataaaacatgaatagtatcttactcgtgactaatgtttttaatttt 52
Query: 181 ttt 183
|||
Sbjct: 51 ttt 49
>RF01062;MIR812;AP008207.1/14327956-14328125 39947:Oryza sativa
Japonica Group
Length = 170
Score = 149 bits (75), Expect = 3e-35
Identities = 112/123 (91%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| |||||| |||||| ||| ||||||||||||||||||||| | ||||| ||||||
Sbjct: 170 gtttccgcgcctaactttgatcatccgtcttatttaaaatttttttagaattaacatttt 111
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 110 tgttgttatgagatgataaaacatgaatagtactttactcgtgacttatatttttaattt 51
Query: 180 ttt 182
|||
Sbjct: 50 ttt 48
>RF01062;MIR812;AAAA02027930.1/20244-20415 39946:Oryza sativa Indica
Group
Length = 172
Score = 149 bits (75), Expect = 3e-35
Identities = 112/123 (91%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 62 ttttcgcgcccaactttaatcgcccgtcttatttaaaa-ttttttataattagcattttt 120
|||||||| ||| ||| |||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 171 ttttcgcgttcaattttgatcgtccgtcttatttaaaaattttttataattagtattttt 112
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
|||||||| ||||||||||||||||||||||||||||||||||||||| | |||| ||||
Sbjct: 111 gttgttatgagatgataaaacatgaatagtactttactcgtgacttatgtttttaatttt 52
Query: 181 ttt 183
|||
Sbjct: 51 ttt 49
>RF01062;MIR812;AAAA02011210.1/47142-47314 39946:Oryza sativa Indica
Group
Length = 173
Score = 147 bits (74), Expect = 1e-34
Identities = 148/173 (85%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||||||||||||||||||| | | ||||||||| |||||| |||| |||||||||
Sbjct: 173 gttttcgcgcccaactttaatcgttcattttatttaaattttttttataaatagcatttt 114
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
|||| |||||||||||||||||||||||| ||||||||||||||||||| | |||| |||
Sbjct: 113 tgttattataagatgataaaacatgaataatactttactcgtgacttatgtttttaattt 54
Query: 180 ttttnnnnnnnnnttt-aaataaaacgaatggtcaaagttgggcgcggaaaac 231
|||| ||| |||||| ||||||||| |||||||||||| ||||||
Sbjct: 53 ttttttcaaaaattttcaaataagacgaatggttaaagttgggcgctgaaaac 1
>RF01062;MIR812;AACV01008873.1/15378-15551 39947:Oryza sativa
Japonica Group
Length = 174
Score = 147 bits (74), Expect = 1e-34
Identities = 108/118 (91%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgt 125
|||||||||||| |||| ||||||||||||||||||||| |||||||| | |||||||||
Sbjct: 167 gcgcccaactttgatcgtccgtcttatttaaaatttttttataattagtaattttgttgt 108
Query: 126 tataagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||||||||||||||| ||||||| ||||||||||||||||||| | |||| |||||||
Sbjct: 107 tataagatgataaaatatgaatactactttactcgtgacttatgtttttaattttttt 50
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 147 bits (74), Expect = 1e-34
Identities = 192/233 (82%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 26 atactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgcc 85
||||||||||||||||| ||||||| || ||||||||| || || ||||||| |||
Sbjct: 1 atactacctccgtcccaaaataagtgcagccatgagtttccgtgctcaactttgatcatt 60
Query: 86 cgtcttatttaaaatttt-ttataattagcatttttgttgttataagatgataaaacatg 144
|||||||||| || |||| ||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 61 cgtcttattttaattttttttataattagcatttttgttgttatgagatgataaaacgtg 120
Query: 145 aatagtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaac 204
| ||||||||||||| |||||||| | |||| |||||| || |||||| ||
Sbjct: 121 agtagtactttactcctgacttatgtttttaagttttttttaaaaaaattcaaataagac 180
Query: 205 gaatggtcaaagttgggcgcggaaaaccatgactgcatttattttgggacgga 257
||| ||||||||||| |||| ||| |||| ||||| |||||||||||||||
Sbjct: 181 gaacggtcaaagttgaacgcgaaaacccatagctgcacttattttgggacgga 233
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 196 aaataaaacgaatggtcaaagttgggcgcggaaaaccatgactgcatttattttgggacg 255
|||||| ||||||| ||||||||| || |||||| |||| ||||| |||||||||||||
Sbjct: 70 aaataagacgaatgatcaaagttgagcacggaaactcatggctgcacttattttgggacg 11
Query: 256 ga 257
||
Sbjct: 10 ga 9
>RF01062;MIR812;AAAA02017731.1/13732-13902 39946:Oryza sativa Indica
Group
Length = 171
Score = 145 bits (73), Expect = 4e-34
Identities = 103/113 (91%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataa 130
|||||||| || | |||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 161 ccaactttgattgtccgtcttattcgaaattttttataattagcatttttgttgttatga 102
Query: 131 gatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||||||||||||||||| |||||||||||||||||||| | |||| |||||||
Sbjct: 101 gatgataaaacatgaatggtactttactcgtgacttatgtttttaattttttt 49
>RF01062;MIR812;AAAA02007290.1/11578-11749 39946:Oryza sativa Indica
Group
Length = 172
Score = 145 bits (73), Expect = 4e-34
Identities = 101/109 (92%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||||| | || ||| |||| ||||||||||| ||||||||| |||||||| |||||
Sbjct: 172 gttttcgcgtctaattttgatcgtccgtcttatttgaaatttttttataattagtatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 64
>RF01062;MIR812;AY946442.1/200-29 4530:Oryza sativa (rice)
Length = 172
Score = 145 bits (73), Expect = 4e-34
Identities = 146/172 (84%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattt-tttataattagcatttt 119
|||| |||||||||||| |||| ||||||||||||||| |||||||||| ||||||
Sbjct: 172 gtttccgcgcccaacttcgatcgtccgtcttatttaaaaaaaatttataattaacatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||
Sbjct: 112 tgttgttatgagatgataaaacatgaatagtactttactcgtgacttatgtttttaattt 53
Query: 180 ttttnnnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
|||| || |||||| ||||| ||||||||||||||| |||||||
Sbjct: 52 ttttaaaaaaaaattcaaataagacgaacggtcaaagttgggcgtggaaaac 1
>RF01062;MIR812;CR855047.1/68417-68246 4530:Oryza sativa (rice)
Length = 172
Score = 145 bits (73), Expect = 4e-34
Identities = 101/109 (92%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttattt-aaaattttttataattagcatttt 119
|||||||||||||| ||| |||| | || |||||| ||||||||||||||||||||||||
Sbjct: 172 gttttcgcgcccaattttgatcgtctgttttatttgaaaattttttataattagcatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 112 tgttattataagatgataaaacatgaataatactttactcgtgacttat 64
>RF01062;MIR812;AP003922.2/73692-73522 39947:Oryza sativa Japonica
Group
Length = 171
Score = 145 bits (73), Expect = 4e-34
Identities = 147/172 (85%), Gaps = 2/172 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| ||||| |||||||||||| |||| |||||| || |||||| ||||||||||||||
Sbjct: 171 gtttccgcgctcaactttaatcgtccgttttatttgaattttttttataattagcatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||| ||||||||||||||||||||||||||||| ||||||||| | |||| ||
Sbjct: 111 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatgtttttaaatt 52
Query: 180 ttttnnnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
|||| ||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 51 ttttcaaaaatttttt-aataagacgaacggtcaaagttgggcgcggaaaac 1
>RF01062;MIR812;AAAA02017193.1/13592-13421 39946:Oryza sativa Indica
Group
Length = 172
Score = 145 bits (73), Expect = 4e-34
Identities = 146/172 (84%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| ||||||||||||| |||| ||||||||||| ||||||||| |||||||| |||||
Sbjct: 172 gtttccgcgcccaactttgatcgtccgtcttatttgaaatttttttataattagtatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||||||||||||||||||||| | |||||||||||||||| || | |||| |||
Sbjct: 112 tgttgttataagatgataaaacatgaaaattactttactcgtgactaatttttttaattt 53
Query: 180 ttttnnnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
|||| || |||||| ||||||| ||||| ||||||||| |||||
Sbjct: 52 ttttcaaaaagttttcaaataagacgaatgatcaaaattgggcgcgaaaaac 1
>RF01062;MIR812;AY946491.1/27-199 4530:Oryza sativa (rice)
Length = 173
Score = 145 bits (73), Expect = 4e-34
Identities = 147/172 (85%), Gaps = 2/172 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||||||||| ||||||| |||| ||||||||||| ||||||||| ||||||||||||||
Sbjct: 173 gttttcgcgctcaactttgatcgtccgtcttatttgaaatttttttataattagcatttt 114
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||| ||| ||||||||||||||||||| |||||||||||||| | |||| |||
Sbjct: 113 tgttgttatgggataataaaacatgaatagtactctactcgtgacttatgtttttaattt 54
Query: 180 ttttnnnnnnnnnttt-aaataaaacgaatggtcaaagttgggcgcggaaaa 230
|||| ||| |||||| ||||| |||||||||||||||| |||||
Sbjct: 53 ttttcaaaaaaattttcaaataagacgaacggtcaaagttgggcgcagaaaa 2
>RF01058;MIR806;AAAA02001819.1/3379-3140 39946:Oryza sativa Indica
Group
Length = 240
Score = 145 bits (73), Expect = 4e-34
Identities = 192/232 (82%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 27 tactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgccc 86
||||||||||||| || ||||||| || ||| ||||||||||||||||||| ||| |
Sbjct: 2 tactacctccgtctcaaaataagtgcagccat-agttttcgcgcccaactttgatcatct 60
Query: 87 gtcttatttaaaatttttt-ataattagcatttttgttgttataagatgataaaacatga 145
||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 61 gtcttatttgaaattttttcataattagcatttttgttgttatgaaatgataaaatatga 120
Query: 146 atagtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaacg 205
|||||||||||||| |||||||| | || | |||||| || |||||| | |
Sbjct: 121 atagtactttactcatgacttatgttttaaaattttttcaaatttctttcaaataagatg 180
Query: 206 aatggtcaaagttgggcgcggaaaaccatgactgcatttattttgggacgga 257
|| ||| ||||||||||||| ||||| ||| ||||| ||||||||| |||||
Sbjct: 181 aacggttaaagttgggcgcgaaaaactatggctgcacttattttggaacgga 232
Score = 46.1 bits (23), Expect = 3e-04
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 211 tcaaagttgggcgcggaaaaccatgactgcatttattttgggacgga 257
|||||||||||||| |||||| ||| ||||| |||||||| ||||||
Sbjct: 54 tcaaagttgggcgc-gaaaactatggctgcacttattttgagacgga 9
>RF01062;MIR812;AC073392.3/147171-147000 4530:Oryza sativa (rice)
Length = 172
Score = 143 bits (72), Expect = 2e-33
Identities = 112/124 (90%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| |||||||||||||||||| ||| |||||| ||||||||| ||||||||||||||
Sbjct: 172 gtttccgcgcccaactttaatcgttcgttttatttgaaatttttttataattagcatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
|||||||| ||||||||||||||| ||||||||||| |||||||||||| | |||| |||
Sbjct: 112 tgttgttacaagatgataaaacataaatagtactttcctcgtgacttatgtttttaattt 53
Query: 180 tttt 183
||||
Sbjct: 52 tttt 49
>RF01062;MIR812;AP008207.1/14616063-14615893 39947:Oryza sativa
Japonica Group
Length = 171
Score = 143 bits (72), Expect = 2e-33
Identities = 102/112 (91%)
Strand = Plus / Minus
Query: 72 caactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataag 131
||||||| |||| |||||||||||||||||||||||||| | |||||| ||||||| ||
Sbjct: 160 caactttgatcgtccgtcttatttaaaattttttataatcaatatttttattgttatgag 101
Query: 132 atgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||||||||||||||||||||||||||||||||||||| | |||| |||||||
Sbjct: 100 atgataaaacatgaatagtactttactcgtgacttatgtttttatttttttt 49
>RF01062;MIR812;AP005675.3/91888-91727 39947:Oryza sativa Japonica
Group
Length = 162
Score = 143 bits (72), Expect = 2e-33
Identities = 100/108 (92%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 62 ttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcattttt 120
|||||| ||| |||||| |||| ||||||||||||||||||||| |||||||| ||||||
Sbjct: 161 ttttcgtgcctaactttgatcgtccgtcttatttaaaatttttttataattagtattttt 102
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 101 attgttatgagatgataaaacatgaatagtactttactcgtgacttat 54
>RF01062;MIR812;CR855103.1/43560-43731 4530:Oryza sativa (rice)
Length = 172
Score = 143 bits (72), Expect = 2e-33
Identities = 136/159 (85%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataag 131
||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 160 aactttaatcgtccgtcttatttaaaatttttttataattagcaattttgttgttataag 101
Query: 132 atgataaaacatgaatagtactttactcgtgacttatatctttagtttttttnnnnnnnn 191
||| |||||||| ||||||| ||||||||||| |||| | |||| |||||||
Sbjct: 100 atggtaaaacataaatagtattttactcgtgatttatgtttttaatttttttacaaaaaa 41
Query: 192 ntttaaataaaacgaatggtcaaagttgggcgcggaaaa 230
|| |||||||||||||| ||||||||||| || |||||
Sbjct: 40 tttcaaataaaacgaatgatcaaagttgggagctgaaaa 2
>RF01062;MIR812;AAAA02019804.1/47754-47923 39946:Oryza sativa Indica
Group
Length = 170
Score = 143 bits (72), Expect = 2e-33
Identities = 97/104 (93%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttg 124
|||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||
Sbjct: 165 cgcgcccaactttaatcgtccgtcttattttaaatttttttataattagtatttttgttg 106
Query: 125 ttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||| ||||||||||| |||||||||| ||||||||||||||||
Sbjct: 105 ttatgagatgataaaatatgaatagtattttactcgtgacttat 62
Score = 50.1 bits (25), Expect = 2e-05
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 66 cgcgcccaactttaatcgcccgtcttattt-aaaattttttataa 109
|||| |||||||||| || ||||||||||| ||||||||||||||
Sbjct: 6 cgcgtccaactttaaccgtccgtcttatttaaaaattttttataa 50
>RF01062;MIR812;AACV01023121.1/33022-33182 39947:Oryza sativa
Japonica Group
Length = 161
Score = 143 bits (72), Expect = 2e-33
Identities = 112/124 (90%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttattt-aaaattttttataattagcatttt 119
|||||||||||||| ||| |||| ||||||||||| |||||||||||||||||| |||||
Sbjct: 161 gttttcgcgcccaattttgatcgtccgtcttatttgaaaattttttataattagtatttt 102
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
|||||||| |||||||||||||||||||| ||||||||||||||||| | |||| |||
Sbjct: 101 tgttgttacgtgatgataaaacatgaatagtgctttactcgtgacttatgtttttaattt 42
Query: 180 tttt 183
||||
Sbjct: 41 tttt 38
>RF01062;MIR812;AP003374.3/116876-116710 39947:Oryza sativa Japonica
Group
Length = 167
Score = 141 bits (71), Expect = 6e-33
Identities = 93/99 (93%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttata 129
||||||||||||| | ||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 157 ccaactttaatcgtctgtcttatttgaaatttttttataattagcatttttgttgttatg 98
Query: 130 agatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 97 agatgataaaacatgaatagtactttactcttgacttat 59
>RF01062;MIR812;AP004161.3/106159-105991 39947:Oryza sativa Japonica
Group
Length = 169
Score = 141 bits (71), Expect = 6e-33
Identities = 110/123 (89%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
|||| ||| ||||||||| || |||||||||||||||| |||||||||||||| || |||
Sbjct: 169 gtttccgcacccaactttgattgcccgtcttatttaaatttttttataattagtatattt 110
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
|||||||| ||||||||||| ||||||| ||||||||||||||||||| | |||| ||||
Sbjct: 109 gttgttatgagatgataaaatatgaataatactttactcgtgacttatgtttttaatttt 50
Query: 181 ttt 183
|||
Sbjct: 49 ttt 47
>RF01062;MIR812;AP008209.1/27052678-27052511 39947:Oryza sativa
Japonica Group
Length = 168
Score = 141 bits (71), Expect = 6e-33
Identities = 112/123 (91%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||||| ||||||||| ||| |||||||||||||| |||||| ||||||| |||||
Sbjct: 168 gttttcgcgtccaacttta-tcgtccgtcttatttaaattttttttataattattatttt 110
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||
Sbjct: 109 tgttgttatgagatgataaaacatgaatagtactttactcgtgacttatgtttttatttt 50
Query: 180 ttt 182
|||
Sbjct: 49 ttt 47
>RF01062;MIR812;AAAA02017353.1/54593-54420 39946:Oryza sativa Indica
Group
Length = 174
Score = 139 bits (70), Expect = 2e-32
Identities = 143/168 (85%), Gaps = 3/168 (1%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcattttt--gtt 123
|||||||||||| |||| ||||||||||| ||||||||| |||||||| |||||| |||
Sbjct: 168 gcgcccaactttgatcgtccgtcttatttgaaatttttttataattagtatttttttgtt 109
Query: 124 gttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
| ||||||||||| ||||| ||||| ||||||||||||||||||||| |||| || ||||
Sbjct: 108 gctataagatgatgaaacacgaataatactttactcgtgacttatatttttaattatttt 49
Query: 184 nnnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
||||||||| ||||||||||||||||||||||| |||||
Sbjct: 48 taaaaaaaatttaaataagacgaatggtcaaagttgggcgcgaaaaac 1
>RF01062;MIR812;AAAA02004016.1/1508-1676 39946:Oryza sativa Indica
Group
Length = 169
Score = 139 bits (70), Expect = 2e-32
Identities = 110/122 (90%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| ||||||||||||| |||| | ||||||||| ||||||||| ||||||||||||||
Sbjct: 169 gtttccgcgcccaactttgatcgtctgtcttatttgaaatttttttataattagcatttt 110
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
| ||| |||||||||||||||||||||||||| |||||||||||||||| | |||| |||
Sbjct: 109 tcttgatataagatgataaaacatgaatagtattttactcgtgacttatgtttttatttt 50
Query: 180 tt 181
||
Sbjct: 49 tt 48
>RF01058;MIR806;AP005542.3/3261-3021 39947:Oryza sativa Japonica
Group
Length = 241
Score = 139 bits (70), Expect = 2e-32
Identities = 179/217 (82%), Gaps = 1/217 (0%)
Strand = Plus / Plus
Query: 26 atactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgcc 85
||||| ||||||||||| ||||| || || |||||| |||| |||||||| |||| |
Sbjct: 1 atacttcctccgtcccattttaagtgtaaccacgagtttccgcgtccaactttgatcgtc 60
Query: 86 cgtcttatttaaaatttt-ttataattagcatttttgttgttataagatgataaaacatg 144
|||||||||| || |||| |||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 61 cgtcttatttgaattttttttataattagtattttttttgttatgagatgataaaacatg 120
Query: 145 aatagtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaac 204
|||||||||||||||||||||||| | |||| |||||| || |||||| |
Sbjct: 121 aatagtactttactcgtgacttatgtttttaaattttttttaacttttttcaaataagat 180
Query: 205 gaatggtcaaagttgggcgcggaaaaccatgactgca 241
| | | ||||||||||||||||||||||||| |||||
Sbjct: 181 ggacgatcaaagttgggcgcggaaaaccatggctgca 217
>RF01062;MIR812;AAAA02022381.1/2540-2699 39946:Oryza sativa Indica
Group
Length = 160
Score = 137 bits (69), Expect = 1e-31
Identities = 97/105 (92%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 80 atcgcccgtcttatttaaaat-tttttataattagcatttttgttgttataagatgataa 138
|||| |||| ||||||||||| |||||| |||||| |||||||||||||| |||||||||
Sbjct: 141 atcgtccgttttatttaaaatatttttacaattagtatttttgttgttatgagatgataa 82
Query: 139 aacatgaatagtactttactcgtgacttatatctttagttttttt 183
|||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 81 aacatgaatagtactttactcgtgacttatatttttaattttttt 37
>RF01062;MIR812;AAAA02022486.1/26495-26325 39946:Oryza sativa Indica
Group
Length = 171
Score = 137 bits (69), Expect = 1e-31
Identities = 103/113 (91%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttata 129
||||||| ||||| |||| |||||| ||||||||| |||||||||| |||||||||||||
Sbjct: 161 ccaacttcaatcgtccgttttatttgaaatttttttataattagcaattttgttgttata 102
Query: 130 agatgataaaacatgaatagtactttactcgtgacttatatctttagtttttt 182
|||||||||||||||||||||||||||||||||| ||||| |||| ||||||
Sbjct: 101 cgatgataaaacatgaatagtactttactcgtgacctatatttttaatttttt 49
>RF01062;MIR812;AAAA02004388.1/22484-22653 39946:Oryza sativa Indica
Group
Length = 170
Score = 137 bits (69), Expect = 1e-31
Identities = 100/109 (91%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| ||||| ||| ||| |||| ||||||||||| ||||||||| ||||||||||||||
Sbjct: 170 gtttccgcgctcaattttgatcgtccgtcttatttgaaatttttttataattagcatttt 111
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 110 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttat 62
>RF01062;MIR812;AACV01006911.1/363-197 39947:Oryza sativa Japonica
Group
Length = 167
Score = 137 bits (69), Expect = 1e-31
Identities = 97/105 (92%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 80 atcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataagatgataa 138
|||| ||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 152 atcgtccgtcttatttgaaatttttttataattagcaattttgttgttataagatgataa 93
Query: 139 aacatgaatagtactttactcgtgacttatatctttagttttttt 183
|||||||||| ||||||||||||||||||| | |||| |||||||
Sbjct: 92 aacatgaatactactttactcgtgacttatgtttttatttttttt 48
>RF01062;MIR812;AACV01014495.1/45963-46136 39947:Oryza sativa
Japonica Group
Length = 174
Score = 137 bits (69), Expect = 1e-31
Identities = 146/174 (83%), Gaps = 3/174 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttt---tataattagcatt 117
|||||||||| |||||| |||| ||||||||||||| ||||| |||||||||||||
Sbjct: 174 gttttcgcgcttaactttgatcgtccgtcttatttaatttttttatatataattagcatt 115
Query: 118 tttgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagt 177
||||||| ||| |||||||||| |||||||||||||||||||||||||||| | |||| |
Sbjct: 114 tttgttgctatgagatgataaagcatgaatagtactttactcgtgacttatgtttttaat 55
Query: 178 ttttttnnnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
|||||| || |||||| | ||| |||||||||||||||||||||||
Sbjct: 54 ttttttcaaaaaattttcaaataagatgaacggtcaaagttgggcgcggaaaac 1
>RF01062;MIR812;AAAA02026397.1/276-440 39946:Oryza sativa Indica
Group
Length = 165
Score = 135 bits (68), Expect = 4e-31
Identities = 112/126 (88%), Gaps = 3/126 (2%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt---ataattagcatt 117
|||| |||| |||||||| |||| || |||||||| ||||||||| |||||||| |||
Sbjct: 165 gtttccgcgtccaactttgatcgtccatcttatttgaaatttttttttataattagtatt 106
Query: 118 tttgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagt 177
||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |
Sbjct: 105 tttattgttataagatgataaaacatgaatagtactttactcgtgacttatgtttttaat 46
Query: 178 tttttt 183
||||||
Sbjct: 45 tttttt 40
>RF01062;MIR812;AAAA02017708.1/13355-13199 39946:Oryza sativa Indica
Group
Length = 157
Score = 135 bits (68), Expect = 4e-31
Identities = 93/100 (93%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 85 ccgtcttatttaaaatttttt-ataattagcatttttgttgttataagatgataaaacat 143
|||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 136 ccgtcttatttaaattttttttataattagcaattttgttgttataagatgataaaacat 77
Query: 144 gaatagtactttactcgtgacttatatctttagttttttt 183
||||| ||||||||| ||||||||||| |||| |||||||
Sbjct: 76 gaatactactttacttgtgacttatatttttaattttttt 37
>RF01062;MIR812;AP008208.1/22478382-22478209 39947:Oryza sativa
Japonica Group
Length = 174
Score = 135 bits (68), Expect = 4e-31
Identities = 126/147 (85%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 72 caactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataa 130
||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 163 caactttgatcgtccgtcttatttaaaatttttttataattagcatttttgttgttatga 104
Query: 131 gatgataaaacatgaatagtactttactcgtgacttatatctttagtttttttnnnnnnn 190
||| |||||| || ||||||| |||||||||||||||| | |||| |||||||
Sbjct: 103 gataataaaatataaatagtattttactcgtgacttatgtttttaatttttttttaaaaa 44
Query: 191 nntttaaataaaacgaatggtcaaagt 217
||||||||||||||||| |||||||
Sbjct: 43 attttaaataaaacgaatgatcaaagt 17
>RF01062;MIR812;AACV01006765.1/6108-5948 39947:Oryza sativa Japonica
Group
Length = 161
Score = 135 bits (68), Expect = 4e-31
Identities = 99/108 (91%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatt-ttttataattagcatttt 119
|||||||| | |||||||||||| |||||||||||||||| |||||||||||| |||||
Sbjct: 161 gttttcgcactcaactttaatcgttcgtcttatttaaaattattttataattagtatttt 102
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgactta 167
|||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 101 tgttgttataagatgatatcatatgaatagtactttactcgtgactta 54
>RF01062;MIR812;AAAA02020785.1/3441-3270 39946:Oryza sativa Indica
Group
Length = 172
Score = 135 bits (68), Expect = 4e-31
Identities = 111/124 (89%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttat-aattagcatttt 119
|||| |||||||||||||||||| || |||||||||||||||||| | |||||| |||||
Sbjct: 172 gtttccgcgcccaactttaatcgtccatcttatttaaaatttttttttaattagtatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
|||| |||||||||||||||||||||||| || ||||||||| |||||| | |||| |||
Sbjct: 112 tgttattataagatgataaaacatgaataatattttactcgtaacttatgtttttaattt 53
Query: 180 tttt 183
||||
Sbjct: 52 tttt 49
>RF01062;MIR812;AACV01007528.1/40580-40750 39947:Oryza sativa
Japonica Group
Length = 171
Score = 135 bits (68), Expect = 4e-31
Identities = 126/147 (85%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 85 ccgtcttatttaaaatttttt-ataattagcatttttgttgttataagatgataaaacat 143
|||| |||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||
Sbjct: 147 ccgttttatttaaaatttttttataattagcatttttgttgctatgagatgataaaacat 88
Query: 144 gaatagtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaa 203
||||||||||||||| ||||||||| | |||| ||||||| || |||||| |
Sbjct: 87 gaatagtactttacttgtgacttatgtttttaatttttttaaaaattttttcaaataaga 28
Query: 204 cgaatggtcaaagttgggcgcggaaaa 230
|| ||||| ||||||||||||||||||
Sbjct: 27 cggatggttaaagttgggcgcggaaaa 1
>RF01062;MIR812;AACV01012067.1/1001-829 39947:Oryza sativa Japonica
Group
Length = 173
Score = 135 bits (68), Expect = 4e-31
Identities = 111/124 (89%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||||| |||| |||||| |||| ||||||||||||||||||||| ||||||||| ||||
Sbjct: 173 gttttcacgcctaactttgatcgtccgtcttatttaaaatttttttataattagcgtttt 114
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
|||| |||| |||||||||||||||||||||| ||| |||||||||||| | |||| |||
Sbjct: 113 tgttattatgagatgataaaacatgaatagtattttgctcgtgacttatgtttttaattt 54
Query: 180 tttt 183
||||
Sbjct: 53 tttt 50
>RF01062;MIR812;AAAA02015039.1/40485-40656 39946:Oryza sativa Indica
Group
Length = 172
Score = 135 bits (68), Expect = 4e-31
Identities = 105/116 (90%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 69 gcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgtta 127
||||||||||||||| ||| |||||| ||||||||| |||||||| |||||||||||||
Sbjct: 164 gcccaactttaatcgttcgttttatttgaaatttttttataattagtatttttgttgtta 105
Query: 128 taagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
| ||||||||||||||||||||| ||||||||||||||||| | |||| |||||||
Sbjct: 104 tgagatgataaaacatgaatagtgctttactcgtgacttatgtttttaattttttt 49
>RF01062;MIR812;BX000502.2/56342-56514 4530:Oryza sativa (rice)
Length = 173
Score = 135 bits (68), Expect = 4e-31
Identities = 92/100 (92%)
Strand = Plus / Minus
Query: 69 gcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttat 128
|||||||||| |||| ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 164 gcccaactttgatcgtccgtcttatttgaaattttttataattagtatttttgttgttat 105
Query: 129 aagatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||||||||||| |||| ||||||||||
Sbjct: 104 gagatgataaaacatgaatagtattttatgcgtgacttat 65
>RF01062;MIR812;AAAA02036738.1/10015-9844 39946:Oryza sativa Indica
Group
Length = 172
Score = 133 bits (67), Expect = 2e-30
Identities = 110/123 (89%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 62 ttttcgcgcccaactttaatcgcccgtcttatttaaaat-tttttataattagcattttt 120
||||||| ||||| |||||||| ||||||||||| |||| ||||||||||||| ||||||
Sbjct: 171 ttttcgcacccaattttaatcgtccgtcttatttgaaatatttttataattagtattttt 112
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
||||||||||||| |||||| | |||||||||||||||||||||| || | |||| ||||
Sbjct: 111 gttgttataagataataaaatacgaatagtactttactcgtgactcatgtttttaatttt 52
Query: 181 ttt 183
|||
Sbjct: 51 ttt 49
>RF01062;MIR812;ABRL01002063.1/10967-10809 65489:Oryza barthii
Length = 159
Score = 133 bits (67), Expect = 2e-30
Identities = 110/123 (89%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttattt-aaaattttttataattagcatttt 119
|||||||||| | |||||||| | ||| |||||| |||| ||||||||||||| |||||
Sbjct: 159 gttttcgcgctctactttaatagttcgttttatttgaaaactttttataattagtatttt 100
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||
Sbjct: 99 tgttgttatgagatgataaaacatgaatagtactttactcgtgacttatgtttttatttt 40
Query: 180 ttt 182
|||
Sbjct: 39 ttt 37
>RF01062;MIR812;AACV01007418.1/3561-3398 39947:Oryza sativa Japonica
Group
Length = 164
Score = 133 bits (67), Expect = 2e-30
Identities = 97/107 (90%)
Strand = Plus / Minus
Query: 62 ttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttg 121
|||||| | ||||||||||||| ||| |||||| |||||||||||||||| ||||||
Sbjct: 163 ttttcgtgtccaactttaatcgttcgttttatttgaaattttttataattaatattttta 104
Query: 122 ttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ttgttatgagatgataaaacatgaatagtactttactcgtgacttat 57
>RF01062;MIR812;AP008218.1/20042680-20042512 39947:Oryza sativa
Japonica Group
Length = 169
Score = 133 bits (67), Expect = 2e-30
Identities = 109/123 (88%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
|||||||||| ||||||| |||| || ||||||||||| |||||||||||||| || |||
Sbjct: 169 gttttcgcgctcaacttttatcgtccatcttatttaaatttttttataattagtatattt 110
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
|||||||| | ||||||||| || |||||||||||||||||||||||| | |||| ||||
Sbjct: 109 gttgttatgaaatgataaaatataaatagtactttactcgtgacttatgtttttaatttt 50
Query: 181 ttt 183
|||
Sbjct: 49 ttt 47
>RF01062;MIR812;AC137507.3/45931-46099 39947:Oryza sativa Japonica
Group
Length = 169
Score = 133 bits (67), Expect = 2e-30
Identities = 109/123 (88%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
|||| |||| |||||||||||| ||||||||||| || ||||||||||||| |||||||
Sbjct: 169 gtttccgcgtccaactttaatcatccgtcttatttgaatttttttataattaacattttt 110
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
||||||||||||||||||||||| |||| || ||||||| |||||||| | |||| ||||
Sbjct: 109 gttgttataagatgataaaacataaataatattttactcatgacttatgtttttattttt 50
Query: 181 ttt 183
|||
Sbjct: 49 ttt 47
>RF01062;MIR812;AACV01011713.1/13667-13835 39947:Oryza sativa
Japonica Group
Length = 169
Score = 131 bits (66), Expect = 6e-30
Identities = 91/98 (92%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 72 caactttaatcgcccgtcttattt-aaaattttttataattagcatttttgttgttataa 130
|||||||||| | ||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 158 caactttaattgtccgtcttatttgaaaattttttataattagtatttttgttgttataa 99
Query: 131 gatgataaaacatgaatagtactttactcgtgacttat 168
||||||||||||| ||||||| |||||| |||||||||
Sbjct: 98 gatgataaaacataaatagtaatttactagtgacttat 61
>RF01062;MIR812;AP008208.1/25944725-25944560 39947:Oryza sativa
Japonica Group
Length = 166
Score = 131 bits (66), Expect = 6e-30
Identities = 106/118 (89%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgt 125
|||||||| ||| |||| ||||||||||| ||||||||| ||||||||||||||| ||||
Sbjct: 164 gcgcccaattttgatcgtccgtcttatttgaaatttttttataattagcatttttattgt 105
Query: 126 tataagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||| |||||||||||||| |||||||||||||||||||||| | | |||| |||||||
Sbjct: 104 tatgagatgataaaacataaatagtactttactcgtgacttctgtttttaattttttt 47
>RF01062;MIR812;AC133339.3/154381-154211 39947:Oryza sativa Japonica
Group
Length = 171
Score = 131 bits (66), Expect = 6e-30
Identities = 91/98 (92%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 72 caactttaatcgcccgtcttattt-aaaattttttataattagcatttttgttgttataa 130
||||||| |||| || |||||||| |||||||||||||||||| | |||||||||||| |
Sbjct: 160 caactttgatcgtccatcttatttgaaaattttttataattagtacttttgttgttatga 101
Query: 131 gatgataaaacatgaatagtactttactcgtgacttat 168
||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gatgataaaacatgaatagtactttactcgtgacttat 63
>RF01062;MIR812;AP008212.1/10980126-10979955 39947:Oryza sativa
Japonica Group
Length = 172
Score = 131 bits (66), Expect = 6e-30
Identities = 103/114 (90%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttattt-aaaattttttataattagcatttttgttgttata 129
||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 162 ccaactttaatcgtccatcttatttgaaaattttttataattactatttttgttgttatg 103
Query: 130 agatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
|||| ||||||||||||||| |||||||||||||||||| | |||| |||||||
Sbjct: 102 agattataaaacatgaatagcactttactcgtgacttatgtttttaattttttt 49
>RF01062;MIR812;ABRL01002073.1/6466-6304 65489:Oryza barthii
Length = 163
Score = 129 bits (65), Expect = 2e-29
Identities = 90/97 (92%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 72 caactttaatcgcccgtcttatttaaaatt-ttttataattagcatttttgttgttataa 130
|||||||||||| |||||||||||||||| ||||||||||| |||||| |||||||||
Sbjct: 152 caactttaatcgttcgtcttatttaaaattattttataattaatatttttattgttataa 93
Query: 131 gatgataaaacatgaatagtactttactcgtgactta 167
|||||||||| ||||||||||||||||||||||||||
Sbjct: 92 gatgataaaatatgaatagtactttactcgtgactta 56
>RF01062;MIR812;AAAA02035447.1/2861-2704 39946:Oryza sativa Indica
Group
Length = 158
Score = 129 bits (65), Expect = 2e-29
Identities = 105/117 (89%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 68 cgcccaactttaatcgcccgtcttattta-aaattttttataattagcatttttgttgtt 126
|||| |||||| |||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 153 cgcctaactttgatcgtccgtcttatttgtaaattttttataattagtatttttgttgtt 94
Query: 127 ataagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
|| |||||||||||||||||||||| |||||||||||||| | | |||| |||||||
Sbjct: 93 atgagatgataaaacatgaatagtaatttactcgtgacttttgtttttaattttttt 37
>RF01062;MIR812;AP008217.1/4350763-4350922 39947:Oryza sativa
Japonica Group
Length = 160
Score = 129 bits (65), Expect = 2e-29
Identities = 99/109 (90%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatc-gcccgtcttatttaaaattttttataattagcatttt 119
|||||||||| ||||||| ||| ||| ||||||||| || ||| |||||||||| |||||
Sbjct: 160 gttttcgcgctcaactttgatctgccggtcttattttaattttgttataattagtatttt 101
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 100 tgttgttatgagatgataaaacatgaatggtactttactcgtgacttat 52
>RF01062;MIR812;AAAA02020262.1/20290-20463 39946:Oryza sativa Indica
Group
Length = 174
Score = 129 bits (65), Expect = 2e-29
Identities = 90/97 (92%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataag 131
|||||| |||| |||||||||| ||||||||| ||||||||||||||| ||||||| ||
Sbjct: 162 aactttgatcgttcgtcttatttgaaatttttttataattagcatttttattgttatgag 103
Query: 132 atgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||||||||||||||||||||||||||
Sbjct: 102 atgataaaacatgaatagtactttactcgtgacttat 66
>RF01062;MIR812;AACV01008221.1/3287-3126 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 2e-29
Identities = 90/97 (92%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 88 tcttatttaaaatttttt-ataattagcatttttgttgttataagatgataaaacatgaa 146
|||||||| ||||||||| |||||||| ||||||||| |||||||||||||||| |||||
Sbjct: 135 tcttatttgaaatttttttataattagtatttttgttattataagatgataaaatatgaa 76
Query: 147 tagtactttactcgtgacttatatctttagttttttt 183
|||||||||||||||||||||||| |||| |||||||
Sbjct: 75 tagtactttactcgtgacttatatttttaattttttt 39
>RF01062;MIR812;AAAA02018660.1/8972-9143 39946:Oryza sativa Indica
Group
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 83/89 (93%)
Strand = Plus / Minus
Query: 80 atcgcccgtcttatttaaaattttttataattagcatttttgttgttataagatgataaa 139
|||| ||||||||||| || |||||||||||||| |||||||||||||| ||||||||||
Sbjct: 152 atcgtccgtcttatttgaatttttttataattagtatttttgttgttatgagatgataaa 93
Query: 140 acatgaatagtactttactcgtgacttat 168
|||| ||||||||||||||||||||||||
Sbjct: 92 acataaatagtactttactcgtgacttat 64
>RF01062;MIR812;AC121365.2/126856-127026 39947:Oryza sativa Japonica
Group
Length = 171
Score = 129 bits (65), Expect = 2e-29
Identities = 99/109 (90%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| ||| |||||||||||||| ||||||||||| ||||||||| || ||||| |||||
Sbjct: 171 gtttccgcacccaactttaatcgtccgtcttatttgaaatttttttatgattagtatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
||||||||| | ||||||||||||||||||||||||||||||| |||||
Sbjct: 111 tgttgttatgatatgataaaacatgaatagtactttactcgtggcttat 63
>RF01062;MIR812;AAAA02002407.1/1680-1849 39946:Oryza sativa Indica
Group
Length = 170
Score = 129 bits (65), Expect = 2e-29
Identities = 99/109 (90%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||||| |||||||| |||| |||| |||||| ||||||||| ||||||| ||||||
Sbjct: 170 gttttcgcgtccaactttgatcgtccgttttatttgaaatttttttataattaacatttt 111
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||||||||||||| |||| |||||||||||| ||||||
Sbjct: 110 tgttgttataagatgataaaacataaataatactttactcgttacttat 62
>RF01062;MIR812;AY946463.1/200-28 4530:Oryza sativa (rice)
Length = 173
Score = 129 bits (65), Expect = 2e-29
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 100 ttttttataattagcatttttgttgttataagatgataaaacatgaatagtactttactc 159
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ttttttataattagtatttttattgttataagatgataaaacatgaatagtactttactc 73
Query: 160 gtgacttatatctttagtttttttnnnnnnnnntttaaataaaacgaatggtcaaagttg 219
||||||||| |||| ||||||| || |||||| ||||||||||||||||
Sbjct: 72 gtgacttatgcttttaatttttttcaaaaaattttcaaataagacgaatggtcaaagttt 13
Query: 220 ggcgcggaaaac 231
| ||||||||||
Sbjct: 12 gacgcggaaaac 1
>RF01062;MIR812;AAAA02011645.1/12642-12812 39946:Oryza sativa Indica
Group
Length = 171
Score = 129 bits (65), Expect = 2e-29
Identities = 105/117 (89%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 68 cgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgtt 126
||||||||||| | | |||||||||||||| |||||| ||||||||||||||| ||| |
Sbjct: 164 cgcccaactttggttgtccgtcttatttaaattttttttataattagcatttttattgct 105
Query: 127 ataagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
|| |||||||||||||| |||||||||||||||||||||||| | ||||||||||||
Sbjct: 104 atgagatgataaaacataaatagtactttactcgtgacttatgtttttagttttttt 48
>RF01062;MIR812;AAAA02005193.1/10952-10781 39946:Oryza sativa Indica
Group
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 102/113 (90%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 72 caactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataa 130
||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||| ||| |
Sbjct: 161 caactttgatcatccgtcttatttaaaatttttttataattagcatttttattgctatga 102
Query: 131 gatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||||||||||||||||||||||||| |||||||||||| | |||| |||||||
Sbjct: 101 gatgataaaacatgaatagtactttgctcgtgacttatgtttttaattttttt 49
>RF01062;MIR812;AAAA02014084.1/6055-5884 39946:Oryza sativa Indica
Group
Length = 172
Score = 127 bits (64), Expect = 9e-29
Identities = 110/124 (88%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttt-tataattagcatttt 119
|||| ||||||| ||||| |||| |||||||||||||| |||| |||||||| |||||
Sbjct: 172 gtttccgcgccccactttgatcgttcgtcttatttaaaaattttgtataattaatatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||| |||| |||||||||||||||||||||||||||||||||| | |||| |||
Sbjct: 112 tgttgttatgagataataaaacatgaatagtactttactcgtgacttatgtttttaattt 53
Query: 180 tttt 183
||||
Sbjct: 52 tttt 49
>RF01062;MIR812;AP003705.3/61480-61311 39947:Oryza sativa Japonica
Group
Length = 170
Score = 127 bits (64), Expect = 9e-29
Identities = 92/100 (92%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 85 ccgtcttatttaaaatttttt-ataattagcatttttgttgttataagatgataaaacat 143
||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 146 ccgtcttatttgaaatttttttataattagcatttttgtttttataagatgataaaacat 87
Query: 144 gaatagtactttactcgtgacttatatctttagttttttt 183
||||| |||||||||| |||||||| | |||| |||||||
Sbjct: 86 gaataatactttactcatgacttatgtttttaattttttt 47
>RF01062;MIR812;AC134230.2/135969-136140 39947:Oryza sativa Japonica
Group
Length = 172
Score = 127 bits (64), Expect = 9e-29
Identities = 110/124 (88%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||||| | ||||||||| |||| |||| |||||| ||||||||| ||||||||||||||
Sbjct: 172 gttttcacacccaactttgatcgtccgtattatttgaaatttttttataattagcatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
| ||||||| ||||||||||| || |||||||||||||||||||||||| | |||| |||
Sbjct: 112 tattgttatgagatgataaaatataaatagtactttactcgtgacttatgtttttaattt 53
Query: 180 tttt 183
||||
Sbjct: 52 tttt 49
>RF01062;MIR812;AP008215.1/16622921-16622752 39947:Oryza sativa
Japonica Group
Length = 170
Score = 127 bits (64), Expect = 9e-29
Identities = 92/100 (92%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 85 ccgtcttattt-aaaattttttataattagcatttttgttgttataagatgataaaacat 143
||||||||||| |||||||||||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 146 ccgtcttatttgaaaattttttataattagtatttttgttgctatgagatgataaaacat 87
Query: 144 gaatagtactttactcgtgacttatatctttagttttttt 183
||||| ||||||||||||||||||| | |||| |||||||
Sbjct: 86 gaataatactttactcgtgacttatgtttttaattttttt 47
>RF01062;MIR812;AACV01005899.1/988-1157 39947:Oryza sativa Japonica
Group
Length = 170
Score = 127 bits (64), Expect = 9e-29
Identities = 110/124 (88%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattt-tttataattagcatttt 119
|||| |||||| || |||||||| |||||||||||||||||| ||||||||||| |||||
Sbjct: 170 gtttccgcgcctaattttaatcgtccgtcttatttaaaatttgtttataattagtatttt 111
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
| ||| ||| |||||||||||||| |||| ||||||||| ||||||||||| |||| |||
Sbjct: 110 tattgctatgagatgataaaacataaataatactttacttgtgacttatatttttaattt 51
Query: 180 tttt 183
||||
Sbjct: 50 tttt 47
>RF01062;MIR812;AY946429.1/28-188 4530:Oryza sativa (rice)
Length = 161
Score = 127 bits (64), Expect = 9e-29
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 100 ttttttataattagcatttttgttgttataagatgataaaacatgaatagtactttactc 159
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 ttttttataattagcaattttgttgttataagatgataaaacataaatagtactttactc 62
Query: 160 gtgacttatatctttagttttttt 183
||||||||| | |||| |||||||
Sbjct: 61 gtgacttatgtttttatttttttt 38
>RF01062;MIR812;AACV01025132.1/10868-10698 39947:Oryza sativa
Japonica Group
Length = 171
Score = 127 bits (64), Expect = 9e-29
Identities = 92/100 (92%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 70 cccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttat 128
||||| ||| |||| ||||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 162 cccaattttgatcgtccgtcttatttgaaatttttttataattagtatttttgttgttat 103
Query: 129 aagatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 102 gagatgataaaacataaatagtactttactcgtgacttat 63
>RF01058;MIR806;AAAA02034839.1/3524-3764 39946:Oryza sativa Indica
Group
Length = 241
Score = 127 bits (64), Expect = 9e-29
Identities = 92/100 (92%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 70 cccaactttaatcgcccgtcttatttaaaatttt-ttataattagcatttttgttgttat 128
||||| ||| |||| ||||||||||| ||||||| |||||||||| ||||||||||||||
Sbjct: 45 cccaattttgatcgtccgtcttatttgaaatttttttataattagtatttttgttgttat 104
Query: 129 aagatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 105 gagatgataaaacataaatagtactttactcgtgacttat 144
>RF01058;MIR806;CR855233.1/33445-33205 4530:Oryza sativa (rice)
Length = 241
Score = 127 bits (64), Expect = 9e-29
Identities = 101/112 (90%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 58 tgagttttcgcgcccaactttaatcgcccgtcttattt-aaaattttttataattagcat 116
||||||| || | |||| ||| |||| ||||||||||| |||| ||||||||||||| ||
Sbjct: 33 tgagtttccgtgtccaattttgatcgtccgtcttatttgaaaactttttataattagtat 92
Query: 117 ttttgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 93 ttttgttgttatgagatgataaaacatgaatagtattttactcgtgacttat 144
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 65 tcgcgcccaactttaatcgcccgtcttattt 95
|||||||||||||| |||| |||||||||||
Sbjct: 202 tcgcgcccaactttgatcgtccgtcttattt 172
>RF01062;MIR812;AAAA02007013.1/4435-4263 39946:Oryza sativa Indica
Group
Length = 173
Score = 125 bits (63), Expect = 4e-28
Identities = 139/166 (83%), Gaps = 1/166 (0%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgt 125
|||||||| ||| ||| ||||||||||| ||||||||| ||||||||||||||| ||||
Sbjct: 166 gcgcccaattttgatcatccgtcttatttgaaatttttttataattagcatttttattgt 107
Query: 126 tataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttttttnn 185
||| |||||||||||||| |||||||||||||||||||||| | | |||| ||||||
Sbjct: 106 tatgagatgataaaacataaatagtactttactcgtgacttctgtttttaattttttaaa 47
Query: 186 nnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
|| |||||| ||||| |||||||||||||||| ||||||
Sbjct: 46 aaaagttttcaaataagacgaacggtcaaagttgggcgcagaaaac 1
>RF01062;MIR812;ABRL01002014.1/3171-3001 65489:Oryza barthii
Length = 171
Score = 125 bits (63), Expect = 4e-28
Identities = 94/103 (91%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaaaattttt-tataattagcatttttgttgt 125
|||| ||||||| |||| ||||||||||| |||||||| ||||||||| |||||||||||
Sbjct: 164 gcgctcaactttgatcgtccgtcttatttgaaatttttgtataattagtatttttgttgt 105
Query: 126 tataagatgataaaacatgaatagtactttactcgtgacttat 168
||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 104 tatgagatgataaaacataaatagtactttactcgggacttat 62
>RF01062;MIR812;AP008213.1/23885583-23885754 39947:Oryza sativa
Japonica Group
Length = 172
Score = 125 bits (63), Expect = 4e-28
Identities = 91/99 (91%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaa-ttttttataattagcatttttgttgttata 129
||||||||||||| |||||||||||||| |||||||||||| | |||||| |||||||
Sbjct: 162 ccaactttaatcgttcgtcttatttaaaaattttttataatttgtatttttattgttatg 103
Query: 130 agatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 102 agatgataaaacatgaatagtactttactcgtaacttat 64
>RF01062;MIR812;AP008207.1/31033212-31033381 39947:Oryza sativa
Japonica Group
Length = 170
Score = 125 bits (63), Expect = 4e-28
Identities = 140/166 (84%), Gaps = 2/166 (1%)
Strand = Plus / Minus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttg 124
|||| ||||||||||||| |||| |||||| ||||||||| ||||||| ||||| |||
Sbjct: 165 cgcgtccaactttaatcgtccgttttatttgaaatttttttataattaatttttttattg 106
Query: 125 ttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttttttn 184
||||||||||||||||||| |||| ||||||||||||||||||| | |||| |||||||
Sbjct: 105 ttataagatgataaaacataaataatactttactcgtgacttatgttttta-tttttttt 47
Query: 185 nnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaa 230
||||||||| ||||||| | ||||||||||||||||||
Sbjct: 46 caactttttttaaataagacgaatgattaaagttgggcgcggaaaa 1
>RF01062;MIR812;AP008216.1/11627467-11627297 39947:Oryza sativa
Japonica Group
Length = 171
Score = 125 bits (63), Expect = 4e-28
Identities = 108/123 (87%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
||||||| |||||||||| |||| |||||||||||||| |||||||||||||| |||| |
Sbjct: 171 gttttcgtgcccaactttgatcgtccgtcttatttaaatttttttataattagtatttct 112
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
|||||||| ||||| |||||| |||||| ||||||| |||||||||| | |||| ||||
Sbjct: 111 gttgttatgagatggtaaaacgtgaataatactttatacgtgacttatgtttttaatttt 52
Query: 181 ttt 183
|||
Sbjct: 51 ttt 49
Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 72 caactttaatcgcccgtcttatttaaaatttt 103
||||||| |||||||||||||||| |||||||
Sbjct: 13 caactttgatcgcccgtcttatttgaaatttt 44
>RF01062;MIR812;AACV01022357.1/25126-24956 39947:Oryza sativa
Japonica Group
Length = 171
Score = 125 bits (63), Expect = 4e-28
Identities = 108/123 (87%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
||||||||| |||||||| | | |||||||||||| ||||||| |||||| ||||||
Sbjct: 171 gttttcgcgtccaacttttacctttcgtcttatttaattttttttaaaattagtattttt 112
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
|||||||| ||||||||||||||||||| ||||||||||||||||||| | |||| ||||
Sbjct: 111 gttgttatgagatgataaaacatgaatactactttactcgtgacttatgtttttaatttt 52
Query: 181 ttt 183
|||
Sbjct: 51 ttt 49
>RF01062;MIR812;AACV01017339.1/8113-8283 39947:Oryza sativa Japonica
Group
Length = 171
Score = 125 bits (63), Expect = 4e-28
Identities = 97/107 (90%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 63 tttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttg 121
|||||||| ||||||| | || | ||||||||||| |||||| ||||||||||||||||
Sbjct: 169 tttcgcgctcaactttgaacgttcatcttatttaaattttttttataattagcatttttg 110
Query: 122 ttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 109 ttgttatgagatgataaagcatgaatagtactttactcgtgacttat 63
>RF01062;MIR812;AAAA02003808.1/33045-32875 39946:Oryza sativa Indica
Group
Length = 171
Score = 125 bits (63), Expect = 4e-28
Identities = 108/123 (87%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
|||||||| | ||||||| ||| ||||||||||| ||| |||||| |||||| ||||||
Sbjct: 171 gttttcgcactcaacttttatcatccgtcttatttgaaaatttttacaattagtattttt 112
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
|||||||| ||||||| ||| ||||||||||||||||||||||||||| | |||| ||||
Sbjct: 111 gttgttatgagatgatgaaatatgaatagtactttactcgtgacttatgtttttaatttt 52
Query: 181 ttt 183
|||
Sbjct: 51 ttt 49
>RF01062;MIR812;AAAA02014312.1/14008-14177 39946:Oryza sativa Indica
Group
Length = 170
Score = 125 bits (63), Expect = 4e-28
Identities = 102/115 (88%)
Strand = Plus / Minus
Query: 69 gcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttat 128
|||||| ||| |||| ||||||||||| | |||||||||||||| |||||| |||||||
Sbjct: 162 gcccaaatttgatcgtccgtcttatttgattttttttataattagtatttttattgttat 103
Query: 129 aagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||||||||||||||||||| ||||||||| |||||||||| | |||| |||||||
Sbjct: 102 aagatgataaaacatgaatcgtactttacgcgtgacttatgtttttaattttttt 48
>RF01062;MIR812;ABRL01001385.1/28807-28635 65489:Oryza barthii
Length = 173
Score = 125 bits (63), Expect = 4e-28
Identities = 94/103 (91%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgt 125
|||||||||||| |||| |||| |||||| ||||||||| |||||||||| |||| ||||
Sbjct: 166 gcgcccaactttgatcgtccgttttatttgaaatttttttataattagcagttttattgt 107
Query: 126 tataagatgataaaacatgaatagtactttactcgtgacttat 168
||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 106 tataagatgataaaatatgaataatactttactcgtgacttat 64
>RF01062;MIR812;AL442103.2/69331-69155 4530:Oryza sativa (rice)
Length = 177
Score = 125 bits (63), Expect = 4e-28
Identities = 105/117 (89%), Gaps = 4/117 (3%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaatttttt--ataattagcattttt--gttgtt 126
||||||||||||| ||||||||||||||||||||| ||||||| |||||| ||||||
Sbjct: 166 ccaactttaatcgtccgtcttatttaaaattttttttataattaatatttttttgttgtt 107
Query: 127 ataagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
|| ||||||||||| ||||||||||||||||||||||||||| | |||| |||||||
Sbjct: 106 atgagatgataaaatatgaatagtactttactcgtgacttatgtttttaattttttt 50
>RF01062;MIR812;AACV01024312.1/7356-7525 39947:Oryza sativa Japonica
Group
Length = 170
Score = 123 bits (62), Expect = 1e-27
Identities = 92/102 (90%)
Strand = Plus / Minus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgt 125
||||| ||||||| |||| ||||||||||| || |||||||||||||| |||||||||||
Sbjct: 165 cgcgctcaactttgatcgtccgtcttatttgaatttttttataattagtatttttgttgt 106
Query: 126 tataagatgataaaacatgaatagtactttactcgtgactta 167
||| |||||| ||||||| ||||||||||||| |||||||||
Sbjct: 105 tatgagatgacaaaacataaatagtactttacacgtgactta 64
>RF01062;MIR812;AAAA02004256.1/11499-11667 39946:Oryza sativa Indica
Group
Length = 169
Score = 123 bits (62), Expect = 1e-27
Identities = 105/118 (88%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgt 125
|||||||||||| |||| | |||||||||||| |||||| || ||||| |||||| ||||
Sbjct: 163 gcgcccaactttgatcgtctgtcttatttaaattttttttatgattagtatttttattgt 104
Query: 126 tataagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||| ||||||||||||||||||||||||||||||||| | ||| | ||||||||||||
Sbjct: 103 tatgagatgataaaacatgaatagtactttactcgtggcatatttttttagttttttt 46
>RF01062;MIR812;AL928751.2/51474-51645 4530:Oryza sativa (rice)
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 96/106 (90%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||||| | ||||||||| |||| ||||| ||||| ||||||||| ||||||||||||||
Sbjct: 172 gttttcacacccaactttgatcgtccgtcatatttgaaatttttttataattagcatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgact 165
||||||||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 112 tgttgttatgagatgataaaacatgaatattactttattcgtgact 67
>RF01062;MIR812;AP003835.4/38107-38280 39947:Oryza sativa Japonica
Group
Length = 174
Score = 123 bits (62), Expect = 1e-27
Identities = 99/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 60 agttttcgcgcccaactttaatcgcccgtcttattt-aaaattttttataattagcattt 118
|||||| |||| ||||||| |||| ||||||||||| |||| ||||||||||| ||||
Sbjct: 174 agttttagcgctcaactttgatcgtccgtcttatttgaaaaaattttataattaatattt 115
Query: 119 ttgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 114 ttgttgttatgagatgataaaacatgaatagtactctactcgtgacttat 65
>RF01062;MIR812;AP008207.1/13799987-13800152 39947:Oryza sativa
Japonica Group
Length = 166
Score = 123 bits (62), Expect = 1e-27
Identities = 98/110 (89%)
Strand = Plus / Minus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgt 125
||||| |||||||||||| || |||||||||| |||||||||||| ||||||||| |
Sbjct: 161 cgcgctcaactttaatcgtccatcttatttaattttttttataattgctatttttgttat 102
Query: 126 tataagatgataaaacatgaatagtactttactcgtgacttatatcttta 175
||| ||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 101 tatgagatggtaaaacatgaatagtactttactcgtgacttatattttta 52
>RF01062;MIR812;AAAA02013629.1/5990-6158 39946:Oryza sativa Indica
Group
Length = 169
Score = 123 bits (62), Expect = 1e-27
Identities = 86/94 (91%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataaga 132
||||||||||| | ||||||||| | |||||||||||||| |||||||||||||| |||
Sbjct: 157 aactttaatcgtctgtcttatttgattttttttataattagtatttttgttgttatgaga 98
Query: 133 tgataaaacatgaatagtactttactcgtgactt 166
|||||||||||||||| |||||||||||||||||
Sbjct: 97 tgataaaacatgaataatactttactcgtgactt 64
>RF01062;MIR812;AACV01007781.1/24830-25001 39947:Oryza sativa
Japonica Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 105/118 (88%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgt 125
||||| |||||| |||| ||||||||||| || |||||| ||||||| || ||| |||||
Sbjct: 165 gcgcctaactttgatcgtccgtcttatttgaattttttttataattaacaatttagttgt 106
Query: 126 tataagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||
Sbjct: 105 tataagatgataaaacatgaatactactttactcgtgacttatgtatttaattttttt 48
>RF01062;MIR812;AC137620.2/2384-2212 39947:Oryza sativa Japonica
Group
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 145/173 (83%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaa-ttttttataattagcatttt 119
|||| ||||||||||||| |||| | ||||||||||||| ||||||||||||||||||||
Sbjct: 173 gtttccgcgcccaactttgatcgtctgtcttatttaaaaattttttataattagcatttt 114
Query: 120 tgttgttataagatgataaaacatgaatagtac-tttactcgtgacttatatctttagtt 178
| ||||||||| ||||||||||||||| | ||| ||||||||||||| || | |||| ||
Sbjct: 113 tattgttataaaatgataaaacatgaaaaatacttttactcgtgactaatttttttattt 54
Query: 179 tttttnnnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
|||| || |||||| ||||||| | |||||||||||||||||||
Sbjct: 53 ttttaaaaaaaattttcaaataagacgaatgattaaagttgggcgcggaaaac 1
>RF01062;MIR812;AC118347.2/114612-114782 39947:Oryza sativa Japonica
Group
Length = 171
Score = 121 bits (61), Expect = 6e-27
Identities = 98/109 (89%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||||||| | ||||||| |||| |||||||||||||| |||||| |||||||| |||||
Sbjct: 171 gttttcgcactcaactttgatcgtccgtcttatttaaattttttttataattagtatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||||||| |||||||||||||| |||| |||||||||||||||||||
Sbjct: 111 ggttgttatgagatgataaaacattaataatactttactcgtgacttat 63
Score = 48.1 bits (24), Expect = 7e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 62 ttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt 105
|||||||||| |||||| | || ||||||||||| |||||||||
Sbjct: 2 ttttcgcgcctaactttgaccgtccgtcttatttgaaatttttt 45
>RF01062;MIR812;AAAA02043709.1/2181-2021 39946:Oryza sativa Indica
Group
Length = 161
Score = 121 bits (61), Expect = 6e-27
Identities = 111/125 (88%), Gaps = 2/125 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||| |||||||| ||| |||| ||||||||||| ||||||||| |||||||| |||||
Sbjct: 161 gtttttgcgcccaattttgatcgtccgtcttatttgaaatttttttataattagtatttt 102
Query: 120 t-gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtt 178
| |||||||| |||||||||||||||||||| ||||||||||||||||| | |||| ||
Sbjct: 101 ttgttgttatgtgatgataaaacatgaatagtgctttactcgtgacttatgtttttaatt 42
Query: 179 ttttt 183
|||||
Sbjct: 41 ttttt 37
>RF01062;MIR812;AP008209.1/13645053-13644882 39947:Oryza sativa
Japonica Group
Length = 172
Score = 121 bits (61), Expect = 6e-27
Identities = 98/109 (89%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||||||||| ||||||| |||| ||||||||||| ||||||||| |||||||| |||||
Sbjct: 172 gttttcgcgctcaactttgatcgtccgtcttatttgaaatttttttataattagtatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
| ||||||| ||||||||||||||| ||||||||||||| |||| ||||
Sbjct: 112 tattgttatgagatgataaaacatgtatagtactttacttgtgatttat 64
>RF01062;MIR812;AACV01016492.1/19876-19710 39947:Oryza sativa
Japonica Group
Length = 167
Score = 121 bits (61), Expect = 6e-27
Identities = 98/109 (89%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| |||| |||||||| |||| ||| |||||| ||||||||| |||||||| | |||
Sbjct: 167 gtttccgcgtccaactttgatcgttcgttttatttgaaatttttttataattagaagttt 108
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 107 tgttgttataagatgataaaacatgaatggtactttactcgtgacttat 59
>RF01062;MIR812;AP008209.1/35026388-35026560 39947:Oryza sativa
Japonica Group
Length = 173
Score = 121 bits (61), Expect = 6e-27
Identities = 104/117 (88%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 68 cgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgtt 126
||||||||||||||| ||| |||||||||||||||| |||||||||| |||||| |||
Sbjct: 165 cgcccaactttaatcattcgttttatttaaaatttttttataattagcaattttgtagtt 106
Query: 127 ataagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||||||||||||||||| |||| |||||||||||||| |||| | |||| |||||||
Sbjct: 105 ataagatgataaaacataaatattactttactcgtgaattatgtttttaattttttt 49
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 193 tttaaataaaacgaatggtcaaagttgggcg 223
||||||||||||||||| | |||||||||||
Sbjct: 135 tttaaataaaacgaatgattaaagttgggcg 165
>RF01062;MIR812;AACV01011121.1/31665-31494 39947:Oryza sativa
Japonica Group
Length = 172
Score = 121 bits (61), Expect = 6e-27
Identities = 98/109 (89%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| |||||| |||||| |||| |||||||||||||||||||| |||||||| ||||
Sbjct: 172 gtttccgcgcctaactttgatcgttcgtcttatttaaaatttttttataattagtattta 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
| ||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 112 tattgttatgagatgataaaacatgaatagtactttactcgtaacttat 64
>RF01062;MIR812;AP006186.3/121305-121135 39947:Oryza sativa Japonica
Group
Length = 171
Score = 121 bits (61), Expect = 6e-27
Identities = 98/109 (89%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||||||||||||||||||| | |||||||| ||||||||| |||||||| |||||
Sbjct: 171 gttttcgcgcccaactttaatcgtctatcttatttgaaatttttttataattagtatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||| |||| ||||||||||| |||| ||||| ||||||||||||||||
Sbjct: 111 tgttattatgagatgataaaatatgattagtattttactcgtgacttat 63
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaatttttt 105
||||||||||||||| || ||||||||||| |||||||||
Sbjct: 7 cgcgcccaactttaaccgtccgtcttatttgaaatttttt 46
>RF01062;MIR812;AACV01010271.1/7593-7765 39947:Oryza sativa Japonica
Group
Length = 173
Score = 121 bits (61), Expect = 6e-27
Identities = 98/109 (89%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||| ||| |||| ||| |||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 173 gtttttgcgtccaaatttgatcgtccgtcttatttaaaatttttttataattagcatttt 114
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
| ||||||| ||||||||||||||||||| |||||||| |||||||||
Sbjct: 113 tattgttatgagatgataaaacatgaataagactttacttgtgacttat 65
>RF01062;MIR812;AAAA02011051.1/19891-19721 39946:Oryza sativa Indica
Group
Length = 171
Score = 121 bits (61), Expect = 6e-27
Identities = 101/113 (89%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttattt-aaaattttttataattagcatttttgttgttata 129
|||||||| |||| || |||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 161 ccaactttgatcgtccatcttatttgaaaattttttataattagtatttttgttgttatg 102
Query: 130 agatgataaaacatgaatagtactttactcgtgacttatatctttagtttttt 182
||||||||| |||| |||| ||||||||||||||||||| | |||| ||||||
Sbjct: 101 agatgataagacataaataatactttactcgtgacttatgtttttaatttttt 49
>RF01062;MIR812;AAAA02017459.1/30794-30625 39946:Oryza sativa Indica
Group
Length = 170
Score = 121 bits (61), Expect = 6e-27
Identities = 104/117 (88%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 68 cgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgtt 126
||||||| ||| |||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 163 cgcccaaatttgatcgttcgtcttatttaaaatttttttataattagtatttttgttgtt 104
Query: 127 ataagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
|| |||||||||||||| ||||||| |||| ||||||||||| | |||| |||||||
Sbjct: 103 atgagatgataaaacataaatagtattttattcgtgacttatgtttttaattttttt 47
>RF01062;MIR812;AAAA02032780.1/1765-1595 39946:Oryza sativa Indica
Group
Length = 171
Score = 121 bits (61), Expect = 6e-27
Identities = 109/128 (85%)
Strand = Plus / Minus
Query: 104 ttataattagcatttttgttgttataagatgataaaacatgaatagtactttactcgtga 163
||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||
Sbjct: 128 ttataattagcatttttgttgttataagatgataaaatatggatagtgctttactcgtga 69
Query: 164 cttatatctttagtttttttnnnnnnnnntttaaataaaacgaatggtcaaagttgggcg 223
||||| |||||| ||||||| || |||||| |||||| |||||||||| |||
Sbjct: 68 cttatgtctttaatttttttcaaaaaaatttcaaataagacgaattgtcaaagttgagcg 9
Query: 224 cggaaaac 231
| ||||||
Sbjct: 8 ctgaaaac 1
>RF01062;MIR812;AP005685.3/37016-36858 39947:Oryza sativa Japonica
Group
Length = 159
Score = 121 bits (61), Expect = 6e-27
Identities = 88/96 (91%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataaga 132
|||||| |||| |||||||||||||||||||||| |||| |||||||||||||| |||
Sbjct: 146 aactttgatcgttcgtcttatttaaaattttttat--ttagtatttttgttgttatgaga 89
Query: 133 tgataaaacatgaatagtactttactcgtgacttat 168
||||||||||||||||||||||||||| ||||||||
Sbjct: 88 tgataaaacatgaatagtactttactcatgacttat 53
>RF01062;MIR812;AP008208.1/31187520-31187351 39947:Oryza sativa
Japonica Group
Length = 170
Score = 121 bits (61), Expect = 6e-27
Identities = 101/113 (89%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataa 130
|||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| |
Sbjct: 160 ccaactttgatcgcccgtcttatttaat-ttttttataattaatatttttgttgttatga 102
Query: 131 gatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
|||||||||||| ||||||| |||||||||||||||| | |||| |||||||
Sbjct: 101 gatgataaaacacgaatagtgttttactcgtgacttatgtttttaattttttt 49
>RF01062;MIR812;AACV01018820.1/15282-15123 39947:Oryza sativa
Japonica Group
Length = 160
Score = 121 bits (61), Expect = 6e-27
Identities = 89/97 (91%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| ||||||||||||| || | ||||||||||| ||||||||| |||||||| |||||
Sbjct: 160 gtttccgcgcccaactttgatagtccgtcttatttgaaatttttttataattagtatttt 101
Query: 120 tgttgttataagatgataaaacatgaatagtacttta 156
| |||||||||||||||||||||||||||||||||||
Sbjct: 100 tattgttataagatgataaaacatgaatagtacttta 64
>RF01062;MIR812;AAAA02027221.1/2770-2605 39946:Oryza sativa Indica
Group
Length = 166
Score = 121 bits (61), Expect = 6e-27
Identities = 89/97 (91%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataag 131
|||||| |||| |||| ||||||||| |||||| |||||||| |||||| ||||||| ||
Sbjct: 154 aactttgatcgtccgttttatttaaattttttttataattagtatttttattgttatgag 95
Query: 132 atgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||||||||||||||||||||||||||
Sbjct: 94 atgataaaacatgaatagtactttactcgtgacttat 58
>RF01062;MIR812;AP008212.1/5981335-5981494 39947:Oryza sativa
Japonica Group
Length = 160
Score = 121 bits (61), Expect = 6e-27
Identities = 76/81 (93%)
Strand = Plus / Minus
Query: 88 tcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaat 147
|||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 133 tcttatttaaaaaaatttgtaattagtatttttgttgttataagatgataaaacatgaat 74
Query: 148 agtactttactcgtgacttat 168
|||||||||||||||||||||
Sbjct: 73 agtactttactcgtgacttat 53
>RF01062;MIR812;AACV01002667.1/14693-14523 39947:Oryza sativa
Japonica Group
Length = 171
Score = 121 bits (61), Expect = 6e-27
Identities = 92/101 (91%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 69 gcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgtta 127
|||||||||| |||| || |||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 163 gcccaactttgatcgtccatcttatttaaaatttttttataattagtattttcgttgtta 104
Query: 128 taagatgataaaacatgaatagtactttactcgtgacttat 168
| |||||||||||||||||||||||||||||| | ||||||
Sbjct: 103 tgagatgataaaacatgaatagtactttactcataacttat 63
>RF01062;MIR812;AACV01002500.1/8556-8389 39947:Oryza sativa Japonica
Group
Length = 168
Score = 121 bits (61), Expect = 6e-27
Identities = 95/105 (90%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 80 atcgcccgtcttattt-aaaattttttataattagcatttttgttgttataagatgataa 138
|||| ||||||||||| |||| |||||||||||| |||||||||||||| |||||||||
Sbjct: 148 atcgtccgtcttatttgaaaaatttttataattaatatttttgttgttatgagatgataa 89
Query: 139 aacatgaatagtactttactcgtgacttatatctttagttttttt 183
||||| |||| ||||||||||||||||||||| |||| |||||||
Sbjct: 88 aacataaataatactttactcgtgacttatatttttaattttttt 44
>RF01062;MIR812;AAAA02008720.1/621-453 39946:Oryza sativa Indica
Group
Length = 169
Score = 119 bits (60), Expect = 2e-26
Identities = 78/84 (92%)
Strand = Plus / Minus
Query: 87 gtcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaa 146
||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||
Sbjct: 143 gtcttatttaaaattatttataattagtatttttgttgctatgagatgataaaacatgaa 84
Query: 147 tagtactttactcgtgacttatat 170
|| |||||||||||| ||||||||
Sbjct: 83 taatactttactcgtaacttatat 60
>RF01062;MIR812;AACV01024672.1/16013-16181 39947:Oryza sativa
Japonica Group
Length = 169
Score = 119 bits (60), Expect = 2e-26
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 69 gcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttat 128
|||||||||||||| ||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 161 gcccaactttaatcatccgtcttatttgaaattttttataattagtatttttattgttat 102
Query: 129 aagatgataaaacatgaatagtacttta 156
||||||||||| |||||||||||||||
Sbjct: 101 gagatgataaaatatgaatagtacttta 74
>RF01062;MIR812;AACV01018488.1/16663-16492 39947:Oryza sativa
Japonica Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 96/108 (88%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
|||||||||| ||| ||| |||| | ||||||||||| |||||||||||||| ||||||
Sbjct: 172 gttttcgcgcacaattttgatcgttcatcttatttaaatttttttataattagtattttt 113
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
||| || ||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 112 gtttttttaagatgataaaacatgaaaagtactttacacgtgacttat 65
>RF01062;MIR812;AP008207.1/26364722-26364890 39947:Oryza sativa
Japonica Group
Length = 169
Score = 119 bits (60), Expect = 2e-26
Identities = 78/84 (92%)
Strand = Plus / Minus
Query: 100 ttttttataattagcatttttgttgttataagatgataaaacatgaatagtactttactc 159
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ttttttataattaatatttttattgttataagatgataaaacatgaatagtactttactc 70
Query: 160 gtgacttatatctttagttttttt 183
||||||||| | |||| |||||||
Sbjct: 69 gtgacttatgtttttaattttttt 46
>RF01062;MIR812;AACV01008716.1/21724-21892 39947:Oryza sativa
Japonica Group
Length = 169
Score = 119 bits (60), Expect = 2e-26
Identities = 93/104 (89%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
||||||||| |||||||| |||| |||||||||| ||||||||||| | ||| ||||||
Sbjct: 169 gttttcgcgtccaactttcatcgttcgtcttatttgaaattttttatgagtagtattttt 110
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgac 164
||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 109 attgttatgagatgataaaagatgaatagtactttactcgtgac 66
>RF01062;MIR812;AP008211.1/3019166-3019336 39947:Oryza sativa
Japonica Group
Length = 171
Score = 119 bits (60), Expect = 2e-26
Identities = 100/112 (89%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaat-tttttataattagcatttttgttgttataag 131
|||||| |||| | ||||||||| || | ||||||||||||| |||||||||||||| ||
Sbjct: 158 aactttgatcgtctgtcttatttgaattatttttataattagtatttttgttgttatgag 99
Query: 132 atgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||||||||||||||||| ||||||||||||||||||| | |||| |||||||
Sbjct: 98 atgataaaacatgaataatactttactcgtgacttatgtttttaattttttt 47
>RF01062;MIR812;AAAA02007810.1/5543-5371 39946:Oryza sativa Indica
Group
Length = 173
Score = 119 bits (60), Expect = 2e-26
Identities = 140/167 (83%), Gaps = 2/167 (1%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcattttt-gttg 124
||||| |||||| |||| ||||||||||| ||||||||| ||||||||||||||| ||||
Sbjct: 167 gcgccaaactttgatcgtccgtcttatttgaaatttttttataattagcattttttgttg 108
Query: 125 ttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttttttn 184
|||||||||||||||| | ||||| |||||||| ||||||||| | |||| |||||||
Sbjct: 107 ttataagatgataaaataagaataatactttaccagtgacttatgtttttaatttttttt 48
Query: 185 nnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
|| |||||| ||||||| ||||||||||||||| |||||
Sbjct: 47 aaaattttttcaaataagacgaatgttcaaagttgggcgcgaaaaac 1
>RF01062;MIR812;AAAA02004773.1/10543-10373 39946:Oryza sativa Indica
Group
Length = 171
Score = 119 bits (60), Expect = 2e-26
Identities = 109/124 (87%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| |||| ||||||||||||| ||||||||||||| |||||| |||||||| |||||
Sbjct: 171 gtttccgcgtccaactttaatcgttcgtcttatttaaattttttttataattagtatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
| |||||||||||||||||| | | |||||||||||||||||||||| | | |||| |||
Sbjct: 111 tattgttataagatgataaagctttaatagtactttactcgtgacttgtgtttttaattt 52
Query: 180 tttt 183
||||
Sbjct: 51 tttt 48
>RF01062;MIR812;AC068950.11/124784-124613 39947:Oryza sativa
Japonica Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 109/124 (87%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| |||| |||||||| | || |||||||||||||||||||| |||||||| |||||
Sbjct: 172 gtttccgcgtccaactttgaccgttcgtcttatttaaaatttttttataattagtatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
|| || |||||||||||||||||||||||||| |||||| |||||||| | ||||||||
Sbjct: 112 tgctgatataagatgataaaacatgaatagtattttacttatgacttatgtttttagttt 53
Query: 180 tttt 183
||||
Sbjct: 52 tttt 49
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 193 tttaaataaaacgaatggtcaaagttgggcgcggaaa 229
||||||||| ||||| |||||||||||| ||||||||
Sbjct: 135 tttaaataagacgaacggtcaaagttggacgcggaaa 171
>RF01062;MIR812;AACV01000150.1/583-737 39947:Oryza sativa Japonica
Group
Length = 155
Score = 119 bits (60), Expect = 2e-26
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||||||||| ||||||| |||| ||||||||||| || |||||| ||||||||||||||
Sbjct: 155 gttttcgcgctcaactttgatcgtccgtcttatttgaattttttttataattagcatttt 96
Query: 120 tgttgttataagatgataaaacatgaatagta 151
||||||||||||||||||||||||||| ||||
Sbjct: 95 tgttgttataagatgataaaacatgaacagta 64
Score = 46.1 bits (23), Expect = 3e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 193 tttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
||||||||| || ||||||||||||||| |||||||||
Sbjct: 39 tttaaataagacaaatggtcaaagttggatgcggaaaac 1
>RF01062;MIR812;AAAA02022762.1/25747-25574 39946:Oryza sativa Indica
Group
Length = 174
Score = 117 bits (59), Expect = 9e-26
Identities = 90/99 (90%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaa-attttttataattagcatttttgttgttata 129
|||||||| |||| || ||||||||||| | ||||||||||||||| |||||||||||||
Sbjct: 163 ccaactttgatcgtccatcttatttaaatactttttataattagcaattttgttgttata 104
Query: 130 agatgataaaacatgaatagtactttactcgtgacttat 168
|||| |||||||||||||| |||||||||||||| ||||
Sbjct: 103 agataataaaacatgaatactactttactcgtgaattat 65
>RF01062;MIR812;AAAA02015545.1/24306-24475 39946:Oryza sativa Indica
Group
Length = 170
Score = 117 bits (59), Expect = 9e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 90 ttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaatag 149
||||||||| |||||||||||||| |||||||||||||| |||||||||||||||| ||
Sbjct: 141 ttatttaaatttttttataattagtatttttgttgttatgagatgataaaacatgagtat 82
Query: 150 tactttactcgtgacttat 168
|||||||||||||||||||
Sbjct: 81 tactttactcgtgacttat 63
>RF01062;MIR812;AAAA02007384.1/1216-1047 39946:Oryza sativa Indica
Group
Length = 170
Score = 117 bits (59), Expect = 9e-26
Identities = 99/111 (89%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataaga 132
|||||| |||| ||||||||||||| ||||||||||||| |||||||||||||| |||
Sbjct: 158 aactttgatcgtccgtcttatttaat-ttttttataattaatatttttgttgttatgaga 100
Query: 133 tgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
|||||||||||||||||| ||||||| |||||||||| |||| |||||||
Sbjct: 99 tgataaaacatgaatagtgttttactcatgacttatatttttaattttttt 49
>RF01062;MIR812;AC025907.2/43108-42938 4530:Oryza sativa (rice)
Length = 171
Score = 117 bits (59), Expect = 9e-26
Identities = 123/146 (84%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 86 cgtcttatttaaaattt-tttataattagcatttttgttgttataagatgataaaacatg 144
|||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 146 cgtcttatttgaaatttctttataattagcatttttgttgttataagatgataaaatata 87
Query: 145 aatagtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaac 204
|||||||||||| ||| ||||||| | || | ||||||| || |||||| ||
Sbjct: 86 aatagtactttattcgggacttatgttttaaatttttttttaaaaaaattcaaataagac 27
Query: 205 gaatggtcaaagttgggcgcggaaaa 230
|||||||||||||||| |||| ||||
Sbjct: 26 gaatggtcaaagttggacgcgaaaaa 1
>RF01062;MIR812;AP008214.1/15379618-15379788 39947:Oryza sativa
Japonica Group
Length = 171
Score = 117 bits (59), Expect = 9e-26
Identities = 90/99 (90%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttata 129
||||||||||||| ||||||||||||||||||||| || ||||| |||||| |||||||
Sbjct: 161 ccaactttaatcgtccgtcttatttaaaatttttttatgattagtatttttattgttatt 102
Query: 130 agatgataaaacatgaatagtactttactcgtgacttat 168
||||||||||| ||||||||||||||| ||||||||||
Sbjct: 101 agatgataaaatatgaatagtactttatgcgtgacttat 63
>RF01062;MIR812;AAAA02027066.1/8468-8298 39946:Oryza sativa Indica
Group
Length = 171
Score = 117 bits (59), Expect = 9e-26
Identities = 123/146 (84%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 86 cgtcttattt-aaaattttttataattagcatttttgttgttataagatgataaaacatg 144
|||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 146 cgtcttatttgaaaaaattttataattagcatttttgttgttataggatgaaaaaacatg 87
Query: 145 aatagtactttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaac 204
|||||||||| ||| ||||||||| | |||| || |||| ||||||||| ||
Sbjct: 86 aatagtacttcacttgtgacttatgtttttaattgttttaaaagaaaatttaaataagac 27
Query: 205 gaatggtcaaagttgggcgcggaaaa 230
||||||| |||||||| |||||||||
Sbjct: 26 gaatggttaaagttggacgcggaaaa 1
>RF01062;MIR812;AAAA02020057.1/3907-4081 39946:Oryza sativa Indica
Group
Length = 175
Score = 117 bits (59), Expect = 9e-26
Identities = 98/110 (89%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 76 tttaatcgcccgtcttatttaaaatttttt--ataattagcatttttgttgttataagat 133
|||||||| ||||||||||||||||||||| |||||||| ||||||||| |||| ||||
Sbjct: 161 tttaatcgtccgtcttatttaaaattttttttataattagtatttttgttattatgagat 102
Query: 134 gataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||||||| || |||||||||||||| |||||||||| |||| |||||||
Sbjct: 101 gataaaatataaatagtactttacttatgacttatatttttatttttttt 52
>RF01062;MIR812;AAAA02025546.1/9729-9897 39946:Oryza sativa Indica
Group
Length = 169
Score = 117 bits (59), Expect = 9e-26
Identities = 107/123 (86%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
||||||||| | |||||| ||| |||| |||||| ||||||||| ||||| |||||||
Sbjct: 169 gttttcgcgtctaactttgatcatccgttttatttgaaatttttttaaattaacattttt 110
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttt 180
||| |||||||||||||||| |||| |||||||||||||||||||||| | |||| ||||
Sbjct: 109 gttattataagatgataaaatatgactagtactttactcgtgacttatgtttttaatttt 50
Query: 181 ttt 183
|||
Sbjct: 49 ttt 47
>RF01062;MIR812;AAAA02032579.1/242-413 39946:Oryza sativa Indica
Group
Length = 172
Score = 117 bits (59), Expect = 9e-26
Identities = 89/98 (90%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttattt--aaaattttttataattagcatttttgttgttataa 130
|||||| |||| ||||||||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 160 aactttgatcgtccgtcttattttaaaaaatttttataattagtatttttgttgttataa 101
Query: 131 gatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||| |||||||||||||||||| | ||||||
Sbjct: 100 gatgataaaatatgaatagtactttactcataacttat 63
>RF01062;MIR812;AACV01012761.1/14916-15085 39947:Oryza sativa
Japonica Group
Length = 170
Score = 117 bits (59), Expect = 9e-26
Identities = 90/99 (90%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttata 129
|||||||| |||| |||||||||| ||||||||| |||||||| ||||| ||||||||
Sbjct: 160 ccaactttgatcgttcgtcttatttgaaatttttttataattagtattttcgttgttatg 101
Query: 130 agatgataaaacatgaatagtactttactcgtgacttat 168
||||||||||||||||||| |||||||||||||||||||
Sbjct: 100 agatgataaaacatgaatactactttactcgtgacttat 62
>RF01062;MIR812;AP008210.1/28196407-28196576 39947:Oryza sativa
Japonica Group
Length = 170
Score = 117 bits (59), Expect = 9e-26
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 102 ttttataattagcatttttgttgttataagatgataaaacatgaatagtactttactcgt 161
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 127 ttttataattagcatttttgttgttatgagatgataaaacatgaatagtactttaatcgt 68
Query: 162 gacttat 168
|||||||
Sbjct: 67 gacttat 61
>RF01062;MIR812;AAAA02033569.1/7697-7869 39946:Oryza sativa Indica
Group
Length = 173
Score = 115 bits (58), Expect = 4e-25
Identities = 144/173 (83%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||||| |||||||| |||| | | |||||| ||||||||| ||||||| ||||||
Sbjct: 173 gttttcgcgtccaacttttatcgtctattttatttgaaatttttttataattaacatttt 114
Query: 120 t-gttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtt 178
| |||| ||| |||||||||| ||||||||||||||| |||||||||||| | |||| ||
Sbjct: 113 ttgttgctatgagatgataaatcatgaatagtacttttctcgtgacttatgtttttaatt 54
Query: 179 tttttnnnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
||||| || |||||| ||||| |||||||||||||||||||||||
Sbjct: 53 ttttttgaaaaaaattcaaataagacgaacggtcaaagttgggcgcggaaaac 1
>RF01062;MIR812;AAAA02011153.1/42310-42482 39946:Oryza sativa Indica
Group
Length = 173
Score = 115 bits (58), Expect = 4e-25
Identities = 89/98 (90%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 72 caactttaatcgcccgtcttattt-aaaattttttataattagcatttttgttgttataa 130
||||||| |||| ||||||||||| |||| ||||||||||||| |||||| |||||| |
Sbjct: 161 caactttgatcgtccgtcttatttgaaaaatttttataattagtatttttcttgttacga 102
Query: 131 gatgataaaacatgaatagtactttactcgtgacttat 168
||||||||||||||||||||| ||||||||||||||||
Sbjct: 101 gatgataaaacatgaatagtattttactcgtgacttat 64
>RF01062;MIR812;ABRL01001405.1/19095-18926 65489:Oryza barthii
Length = 170
Score = 115 bits (58), Expect = 4e-25
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
|||||||||| ||| ||| |||| |||||||||| ||||| ||||||||||| ||||||
Sbjct: 170 gttttcgcgctcaattttgatcgttcgtcttatttgaaattatttataattagtattttt 111
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttatat 170
||||||| |||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 110 attgttatgagatgataaaacattaataggactttactcgtaacttatat 61
>RF01062;MIR812;AL713933.6/57817-57645 4530:Oryza sativa (rice)
Length = 173
Score = 115 bits (58), Expect = 4e-25
Identities = 117/137 (85%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 96 aaaattttttataattagcattttt-gttgttataagatgataaaacatgaatagtac-t 153
||||||||||||||||| ||||||| |||| ||| ||||||||||||||||||||||| |
Sbjct: 137 aaaattttttataattaacattttttgttgctatgagatgataaaacatgaatagtactt 78
Query: 154 ttactcgtgacttatatctttagtttttttnnnnnnnnntttaaataaaacgaatggtca 213
||||||||||||||| | || | ||||||| ||||||||| ||||| |||||
Sbjct: 77 ttactcgtgacttatgttttcaatttttttttgaaaaattttaaataagacgaacggtca 18
Query: 214 aagttgggcgcggaaaa 230
|||||||||||||||||
Sbjct: 17 aagttgggcgcggaaaa 1
Score = 46.1 bits (23), Expect = 3e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaattttt 104
||||||||||||| | || |||||||||||||||||||
Sbjct: 6 cgcgcccaactttgaccgttcgtcttatttaaaattttt 44
>RF01062;MIR812;AC132483.2/71128-71287 39947:Oryza sativa Japonica
Group
Length = 160
Score = 115 bits (58), Expect = 4e-25
Identities = 76/82 (92%)
Strand = Plus / Minus
Query: 100 ttttttataattagcatttttgttgttataagatgataaaacatgaatagtactttactc 159
|||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 120 ttttttataattagtatttttgttgttatgagatgataaaacatgaatagtattttactc 61
Query: 160 gtgacttatatctttagttttt 181
|||||||| | ||||||||||
Sbjct: 60 atgacttatgtttttagttttt 39
>RF01062;MIR812;AP003813.4/82612-82446 39947:Oryza sativa Japonica
Group
Length = 167
Score = 115 bits (58), Expect = 4e-25
Identities = 99/110 (90%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttattt-aaaattttttataattagcatttt 119
||||||||| | || ||||| || ||||||||||| |||||||||||||||||| |||||
Sbjct: 167 gttttcgcgtctaattttaaccgtccgtcttatttgaaaattttttataattagtatttt 108
Query: 120 t-gttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
| |||||||| ||||||||||| |||||||||||||||| ||||||||||
Sbjct: 107 ttgttgttatgagatgataaaatatgaatagtactttacccgtgacttat 58
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 115 bits (58), Expect = 4e-25
Identities = 112/130 (86%)
Strand = Plus / Minus
Query: 27 tactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgccc 86
|||||||||||||||| ||||||| || ||| ||||| || | |||||||| |||| ||
Sbjct: 239 tactacctccgtcccaaaataagtgcagccataagtttccgtgtccaactttgatcgtcc 180
Query: 87 gtcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaa 146
||||||||||||||||||||| ||||| ||||| || |||| |||| |||||| |||||
Sbjct: 179 gtcttatttaaaattttttatgattagtattttaattattattagattataaaatatgaa 120
Query: 147 tagtacttta 156
||||||||||
Sbjct: 119 tagtacttta 110
Score = 58.0 bits (29), Expect = 7e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 26 atactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgcc 85
||||| ||||||||||| |||||| || |||||||| || | ||||||||||||| |
Sbjct: 1 atactccctccgtcccaaaataagcgcagctatgagtttccgtgtccaactttaatcgtc 60
Query: 86 cgtcttatttaaaatttttta 106
|||||||||||| |||||||
Sbjct: 61 tgtcttatttaaattttttta 81
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 115 bits (58), Expect = 4e-25
Identities = 112/130 (86%)
Strand = Plus / Plus
Query: 27 tactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgccc 86
|||||||||||||||| ||||||| || ||| ||||| || | |||||||| |||| ||
Sbjct: 2 tactacctccgtcccaaaataagtgcagccataagtttccgtgtccaactttgatcgtcc 61
Query: 87 gtcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaa 146
||||||||||||||||||||| ||||| ||||| || |||| |||| |||||| |||||
Sbjct: 62 gtcttatttaaaattttttatgattagtattttaattattattagattataaaatatgaa 121
Query: 147 tagtacttta 156
||||||||||
Sbjct: 122 tagtacttta 131
Score = 58.0 bits (29), Expect = 7e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 26 atactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgcc 85
||||| ||||||||||| |||||| || |||||||| || | ||||||||||||| |
Sbjct: 240 atactccctccgtcccaaaataagcgcagctatgagtttccgtgtccaactttaatcgtc 181
Query: 86 cgtcttatttaaaatttttta 106
|||||||||||| |||||||
Sbjct: 180 tgtcttatttaaattttttta 160
>RF01062;MIR812;ABRL01000082.1/33-204 65489:Oryza barthii
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 97/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||||| |||||||| |||| ||||||||||||| |||||| ||||||| ||||||
Sbjct: 172 gttttcgcgaccaactttgatcgttcgtcttatttaaattttttttataattaacatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
| ||||||| ||||||||||||| ||||||||||||| ||||| |||||
Sbjct: 112 ttttgttatgagatgataaaacaagaatagtactttattcgtggcttat 64
>RF01062;MIR812;AAAA02007477.1/25761-25598 39946:Oryza sativa Indica
Group
Length = 164
Score = 113 bits (57), Expect = 1e-24
Identities = 97/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| |||| ||||||||||| | ||||||||||||||||||||| ||||||| |||||
Sbjct: 164 gtttccgcgtccaactttaattgtccgtcttatttaaaatttttttataattaatatttt 105
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
| ||||||| |||||||| ||||||||| || |||||||||||||||||
Sbjct: 104 tattgttatgagatgatacaacatgaatggtgctttactcgtgacttat 56
>RF01062;MIR812;AACV01014495.1/46718-46548 39947:Oryza sativa
Japonica Group
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 88/97 (90%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 88 tcttattt-aaaattttttataattagcatttttgttgttataagatgataaaacatgaa 146
|||||||| ||||||||||||||||| |||||||||| ||| |||||||||||||| ||
Sbjct: 144 tcttatttgaaaattttttataattaatatttttgttgctatgagatgataaaacataaa 85
Query: 147 tagtactttactcgtgacttatatctttagttttttt 183
|||||||||||||||||||||| | |||| |||||||
Sbjct: 84 tagtactttactcgtgacttatgtttttaattttttt 48
>RF01062;MIR812;AP005284.3/81040-80870 39947:Oryza sativa Japonica
Group
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 94/105 (89%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 80 atcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataagatgataa 138
|||| |||| |||||| ||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 152 atcgtccgttttatttgaaatttttttataattagtatttttgttgttatgagatgataa 93
Query: 139 aacatgaatagtactttactcgtgacttatatctttagttttttt 183
|||||||| |||| |||||||||||||||| | |||| |||||||
Sbjct: 92 aacatgaacagtaatttactcgtgacttatgtttttaattttttt 48
>RF01062;MIR812;AAAA02008855.1/40375-40547 39946:Oryza sativa Indica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 97/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||||| ||| ||||||| |||| ||||||||||| ||||||||| |||||||| |||||
Sbjct: 173 gttttcacgctcaactttgatcgtccgtcttatttgaaatttttttataattagtatttt 114
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
| ||||||| ||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 113 tattgttatgagatgataaaacatgtatagtactttattcgtgatttat 65
>RF01062;MIR812;AACV01021279.1/8207-8378 39947:Oryza sativa Japonica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 94/105 (89%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 80 atcgcccgtcttatttaaaatt-ttttataattagcatttttgttgttataagatgataa 138
|||| ||||||||||||||||| |||||||||||| |||||| |||| || |||||||||
Sbjct: 153 atcgtccgtcttatttaaaattgttttataattagtatttttattgtcatgagatgataa 94
Query: 139 aacatgaatagtactttactcgtgacttatatctttagttttttt 183
|||||||||||||||||| |||||||||| | |||| |||||||
Sbjct: 93 aacatgaatagtactttatacgtgacttatgtttttaattttttt 49
>RF01062;MIR812;AAAA02004709.1/10898-10729 39946:Oryza sativa Indica
Group
Length = 170
Score = 113 bits (57), Expect = 1e-24
Identities = 75/81 (92%)
Strand = Plus / Minus
Query: 88 tcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaat 147
|||||||| || |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 143 tcttatttgaatttttttataattagtatttttgttgttatgagatgataaaacatgaat 84
Query: 148 agtactttactcgtgacttat 168
| ||||||||||| |||||||
Sbjct: 83 aatactttactcgcgacttat 63
>RF01062;MIR812;AAAA02010797.1/10823-10993 39946:Oryza sativa Indica
Group
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 97/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttattt-aaaattttttataattagcatttt 119
||||||||| |||||||| |||| |||| |||||| |||| || ||||||||| |||||
Sbjct: 171 gttttcgcgtccaactttgatcgtccgttttatttgaaaaaattatataattagtatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 111 tgttgttatgagatgataaaatatgaatagtactttacttgtgacttat 63
>RF01062;MIR812;AP003488.3/64471-64314 39947:Oryza sativa Japonica
Group
Length = 158
Score = 113 bits (57), Expect = 1e-24
Identities = 99/113 (87%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataa 130
|||||||| |||| ||||||||||| || |||||||||||||| ||||| ||||||| |
Sbjct: 148 ccaactttgatcgtccgtcttatttgaatttttttataattagtattttgtttgttatga 89
Query: 131 gatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
|||||||||||||||||| || ||||||||| |||||| | |||| |||||||
Sbjct: 88 gatgataaaacatgaatactattttactcgtaacttatgtttttatttttttt 36
>RF01062;MIR812;AP003808.3/36375-36546 39947:Oryza sativa Japonica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 142/172 (82%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttattt-aaaattttttataattagcatttt 119
|||||||||||||| ||| |||| ||||| ||||| |||| ||||||||||| |||||
Sbjct: 172 gttttcgcgcccaattttgatcgtccgtcatatttgaaaaaaatttataattagtatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||| ||||||||||| || ||||||| |||| ||||||||||| | |||| |||
Sbjct: 112 tgttgttatgagatgataaaatataaatagtattttattcgtgacttatgtttttaattt 53
Query: 180 ttttnnnnnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaac 231
|||| ||||||||| ||| || ||||||||||||| ||||||||
Sbjct: 52 ttttcagaaaaaatttaaataagacggatagtcaaagttgggcacggaaaac 1
>RF01062;MIR812;AL772427.4/92117-91947 4530:Oryza sativa (rice)
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 88/97 (90%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||| ||||||||||||||| | ||||||||||||||||||| |||||||| |||||
Sbjct: 171 gttttcgtgcccaactttaatcgtctgtcttatttaaaatttttttataattagtatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtacttta 156
| ||||||| ||||||||||||| ||||||||||||
Sbjct: 111 tattgttatgagatgataaaacacaaatagtacttta 75
>RF01062;MIR812;AACV01016893.1/6094-5925 39947:Oryza sativa Japonica
Group
Length = 170
Score = 113 bits (57), Expect = 1e-24
Identities = 97/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttattt-aaaattttttataattagcatttt 119
|||||||||| |||||| |||| |||| |||||| |||| |||||||||||| |||||
Sbjct: 170 gttttcgcgcttaactttgatcgtccgttttatttgaaaaatttttataattaatatttt 111
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
||| ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 110 tgtagttataagatgataaaatatgaatagcactttactcgtgacttat 62
>RF01062;MIR812;AAAA02022985.1/2863-2691 39946:Oryza sativa Indica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 93/104 (89%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaaaatttttt--ataattagcatttttgttg 124
|||| |||||||||||| | |||||||| ||||||||| ||||||| ||||||||||
Sbjct: 167 gcgctcaactttaatcgttcatcttatttgaaattttttttataattattatttttgttg 108
Query: 125 ttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 107 ttatgagatgataaaacatgaatagtactttactcgtcacttat 64
>RF01062;MIR812;AP005405.3/85901-86070 39947:Oryza sativa Japonica
Group
Length = 170
Score = 113 bits (57), Expect = 1e-24
Identities = 103/117 (88%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgt 125
||||| ||| |||| ||| ||||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 165 cgcgctcaattttagtcgtccgtcttatttaaaatttttt-taattagtatttttattgt 107
Query: 126 tataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttttt 182
||||| || ||||||||| |||||||||||| |||||||||||| |||| ||||||
Sbjct: 106 tataaaataataaaacataaatagtactttatacgtgacttatatttttaatttttt 50
>RF01062;MIR812;AY946402.1/28-200 4530:Oryza sativa (rice)
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 102/117 (87%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgtt 126
||||| |||||| ||| ||||||||||| | |||||||||||||||| |||||| |||
Sbjct: 166 gcgcctaactttgatcatccgtcttatttgattttttttataattagcaattttgtagtt 107
Query: 127 ataagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
|||||||||||||||||||||| |||||||||| ||| |||| | |||| |||||||
Sbjct: 106 ataagatgataaaacatgaatactactttactcatgaattatgtttttatttttttt 50
>RF01062;MIR812;AP008214.1/19805635-19805804 39947:Oryza sativa
Japonica Group
Length = 170
Score = 113 bits (57), Expect = 1e-24
Identities = 91/101 (90%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 69 gcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgtta 127
||||||||||||||| ||||||||||||||||||||| |||||||| |||||| ||||||
Sbjct: 162 gcccaactttaatcgtccgtcttatttaaaatttttttataattagtatttttattgtta 103
Query: 128 taagatgataaaacatgaatagtactttactcgtgacttat 168
| | || |||||||||||||| ||||||| ||||||||||
Sbjct: 102 ttatattataaaacatgaatattactttatgcgtgacttat 62
>RF01062;MIR812;AAAA02011074.1/102108-101937 39946:Oryza sativa
Indica Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 98/109 (89%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||||| |||||||||||| |||| |||||| ||||||||| |||||||| |||||
Sbjct: 172 gttttcgcgttcaactttaatcgtccgttttatttgaaatttttttataattagtatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||| | || ||||||||||||||||||| |||||||||||||||||||
Sbjct: 112 tgttct-atgagatgataaaacatgaataatactttactcgtgacttat 65
>RF01062;MIR812;AAAA02004346.1/75869-75699 39946:Oryza sativa Indica
Group
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 94/105 (89%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
|||||||||||||||||| |||| ||||||||||| || |||||||||||||| ||| |
Sbjct: 171 gttttcgcgcccaactttgatcgtccgtcttatttgaa-ttttttataattagtattata 113
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgact 165
|| ||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 112 gtggttatgtgatgataaaatatgaatagtactttactcgtgact 68
>RF01058;MIR806;AAAA02032480.1/10824-10585 39946:Oryza sativa Indica
Group
Length = 240
Score = 113 bits (57), Expect = 1e-24
Identities = 171/212 (80%)
Strand = Plus / Plus
Query: 46 taagtacaatcatgagttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt 105
||||| ||| ||||||||| || | ||||| || |||| | ||||||||| | || |||
Sbjct: 21 taagtgcaaccatgagtttccgtgtccaaccttgatcgtctgtcttatttgattttgttt 80
Query: 106 ataattagcatttttgttgttataagatgataaaacatgaatagtactttactcgtgact 165
|||||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 81 ataattagtatttttattgttatgagatgataaaacatgaatagtactttacgcgtgact 140
Query: 166 tatatctttagtttttttnnnnnnnnntttaaataaaacgaatggtcaaagttgggcgcg 225
||| | || | ||||||| || |||||| ||| | | |||||||||||| ||
Sbjct: 141 tatgttttaaatttttttcaaaaaaatttcaaataagacggacgatcaaagttgggcacg 200
Query: 226 gaaaaccatgactgcatttattttgggacgga 257
||||| |||| ||||| ||| ||||||||||
Sbjct: 201 gaaaatcatggctgcacttaaattgggacgga 232
Score = 56.0 bits (28), Expect = 3e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 26 atactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgcc 85
||||| ||||||||||| ||||| || ||||| ||| || |||||||||| |||| |
Sbjct: 240 atactccctccgtcccaatttaagtgcagccatgattttccgtgcccaactttgatcgtc 181
Query: 86 cgtcttatttaaaatttttt 105
|||||||||| |||||||||
Sbjct: 180 cgtcttatttgaaatttttt 161
>RF01062;MIR812;AAAA02018686.1/12077-11907 39946:Oryza sativa Indica
Group
Length = 171
Score = 111 bits (56), Expect = 6e-24
Identities = 132/159 (83%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaa-ttttttataattagcatttttgttgttataag 131
|||||| |||| |||||||||| ||| ||||||||||||| |||||| ||||||| ||
Sbjct: 159 aactttgatcgttcgtcttatttgaaagttttttataattaatatttttattgttatgag 100
Query: 132 atgataaaacatgaatagtactttactcgtgacttatatctttagtttttttnnnnnnnn 191
||||||||| || |||||||||||||||||||||||| | |||| ||||||
Sbjct: 99 atgataaaatataaatagtactttactcgtgacttatgtttttaaattttttttaaaatt 40
Query: 192 ntttaaataaaacgaatggtcaaagttgggcgcggaaaa 230
||||||||| ||| | ||||||||||||||||||||||
Sbjct: 39 ttttaaataagacggacggtcaaagttgggcgcggaaaa 1
>RF01062;MIR812;AP002908.2/109269-109442 39947:Oryza sativa Japonica
Group
Length = 174
Score = 111 bits (56), Expect = 6e-24
Identities = 96/108 (88%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 62 ttttcgcgcccaactttaatcgcccgtcttattt-aaaattttttataattagcattttt 120
|||||||||| |||||| | || ||||||||| |||||||||||||||||| || |||
Sbjct: 173 ttttcgcgcctaactttgaccgtatgtcttatttgaaaattttttataattagtatcttt 114
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||||| | |||||||||||||||||||||||||||||| ||||||||
Sbjct: 113 gttgttgtcagatgataaaacatgaatagtactttactcttgacttat 66
>RF01062;MIR812;AACV01006061.1/32591-32751 39947:Oryza sativa
Japonica Group
Length = 161
Score = 111 bits (56), Expect = 6e-24
Identities = 101/115 (87%), Gaps = 2/115 (1%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataa 130
|||||||||||| |||||||||||||| |||||||||||||| |||||| ||||||| |
Sbjct: 151 ccaactttaatcatccgtcttatttaaatttttttataattagtatttttattgttatga 92
Query: 131 gatgataaaacatgaatag--tactttactcgtgacttatatctttagttttttt 183
||| |||||| |||||||| |||||||||| |||||||| | |||| |||||||
Sbjct: 91 gataataaaatatgaatagtatactttactcatgacttatgtttttaattttttt 37
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaa 99
||||| |||||||||||| |||||||||||||||
Sbjct: 6 cgcgctcaactttaatcgtccgtcttatttaaaa 39
>RF01062;MIR812;AC136148.2/41090-41260 39947:Oryza sativa Japonica
Group
Length = 171
Score = 111 bits (56), Expect = 6e-24
Identities = 108/124 (87%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaat-tttttataattagcatttt 119
|||| |||| |||||||| |||| | ||||||||| |||| |||||||||||||||||||
Sbjct: 171 gtttccgcgtccaactttgatcgtctgtcttatttgaaatgtttttataattagcatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||| ||| ||||||||| ||||||||| ||||||||| |||| |||| | | ||||||
Sbjct: 111 tgttgctatgagatgataacacatgaataatactttacttgtgagttatgtttgtagttt 52
Query: 180 tttt 183
||||
Sbjct: 51 tttt 48
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 73 aactttaatcgcccgtcttatttaaaatttttt 105
||||||||||| ||||||||||||||||||||
Sbjct: 13 aactttaatcgttcgtcttatttaaaatttttt 45
>RF01062;MIR812;AP002541.2/74846-75005 39947:Oryza sativa Japonica
Group
Length = 160
Score = 111 bits (56), Expect = 6e-24
Identities = 102/116 (87%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaa-ttttttataattagcatttt 119
||||||||| |||| ||| |||| |||||||||||||| |||||||||||||| |||||
Sbjct: 160 gttttcgcgtccaattttgatcgttcgtcttatttaaaagttttttataattagtatttt 101
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatcttta 175
|||| |||| ||| ||||||| |||||||| ||||||||||||| |||| ||||||
Sbjct: 100 tgttattatgagaggataaaatatgaatagcactttactcgtgatttatgtcttta 45
>RF01062;MIR812;AP004689.3/27890-27719 39947:Oryza sativa Japonica
Group
Length = 172
Score = 111 bits (56), Expect = 6e-24
Identities = 86/96 (89%)
Strand = Plus / Minus
Query: 88 tcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaat 147
|||||||| ||||||||||||||||| |||||| || |||| ||||||||||||||||||
Sbjct: 145 tcttatttgaaattttttataattagtatttttattattatgagatgataaaacatgaat 86
Query: 148 agtactttactcgtgacttatatctttagttttttt 183
||||||||| |||||||||| | |||| |||||||
Sbjct: 85 agtactttatgcgtgacttatgtttttaattttttt 50
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 69 gcccaactttaatcgcccgtcttatttaaaa 99
||||||||||||||| |||||||||||||||
Sbjct: 9 gcccaactttaatcgtccgtcttatttaaaa 39
>RF01062;MIR812;AAAA02008236.1/32932-32764 39946:Oryza sativa Indica
Group
Length = 169
Score = 111 bits (56), Expect = 6e-24
Identities = 95/108 (87%)
Strand = Plus / Minus
Query: 76 tttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataagatga 135
|||||||| ||||||||||| ||| ||||||||||||| |||||||||||| | | ||||
Sbjct: 154 tttaatcgtccgtcttatttgaaaatttttataattagtatttttgttgttgtgaaatga 95
Query: 136 taaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||||||||||||||||||||| ||||||| || | |||| |||||||
Sbjct: 94 taaaacatgaatagtactttatgcgtgactcatgtttttatttttttt 47
>RF01062;MIR812;AAAA02011089.1/84707-84876 39946:Oryza sativa Indica
Group
Length = 170
Score = 111 bits (56), Expect = 6e-24
Identities = 90/100 (90%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 85 ccgtcttatttaaaatttttt-ataattagcatttttgttgttataagatgataaaacat 143
|||||||||||||| |||||| |||||| | |||||||||| ||| ||||||||||||||
Sbjct: 146 ccgtcttatttaaattttttttataatttgtatttttgttgctatgagatgataaaacat 87
Query: 144 gaatagtactttactcgtgacttatatctttagttttttt 183
|||||||| |||||||||||||||| | |||| |||||||
Sbjct: 86 gaatagtattttactcgtgacttatgtttttaattttttt 47
>RF01062;MIR812;AP008208.1/18863983-18864152 39947:Oryza sativa
Japonica Group
Length = 170
Score = 111 bits (56), Expect = 6e-24
Identities = 137/164 (83%), Gaps = 2/164 (1%)
Strand = Plus / Minus
Query: 68 cgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgtt 126
|||| ||||||||||| |||||||||| || |||||| |||||||| |||||| |||||
Sbjct: 163 cgcctaactttaatcgttcgtcttattttaattttttttataattagtatttttattgtt 104
Query: 127 ataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttttttnnn 186
|| ||||||||||||||||||||||| |||||||||| |||| |||| |||||||
Sbjct: 103 atgagatgataaaacatgaatagtacattactcgtgatttatgattttaattttttt-aa 45
Query: 187 nnnnnntttaaataaaacgaatggtcaaagttgggcgcggaaaa 230
||||||||||||| | |||||||||||| |||||||||
Sbjct: 44 aaaatttttaaataaaacggacggtcaaagttggacgcggaaaa 1
>RF01062;MIR812;AP008211.1/21341827-21341997 39947:Oryza sativa
Japonica Group
Length = 171
Score = 111 bits (56), Expect = 6e-24
Identities = 109/124 (87%), Gaps = 2/124 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaa-attttttataattagcatttt 119
|||||||||| |||||||||||| ||||| |||| || |||||||||||| || |||||
Sbjct: 171 gttttcgcgctcaactttaatcgttcgtctcatttgaatattttttataatcagtatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
|||| || | ||||||||||| ||||||||||||||||||||||||||| | |||| |||
Sbjct: 111 tgttattttgagatgataaaa-atgaatagtactttactcgtgacttatgtttttaattt 53
Query: 180 tttt 183
||||
Sbjct: 52 tttt 49
>RF01062;MIR812;AACV01025578.1/4137-4307 39947:Oryza sativa Japonica
Group
Length = 171
Score = 111 bits (56), Expect = 6e-24
Identities = 108/124 (87%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| |||||| |||||| |||| ||||||||||| || |||||| |||| |||||||||
Sbjct: 171 gtttccgcgcctaactttgatcgtccgtcttatttgaattttttttataactagcatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
| ||||||| ||||||||||| ||||||||||||||| |||| |||||| | |||| |||
Sbjct: 111 tattgttatgagatgataaaatatgaatagtactttagtcgtaacttatgtttttaattt 52
Query: 180 tttt 183
||||
Sbjct: 51 tttt 48
>RF01062;MIR812;AP003338.3/4697-4870 39947:Oryza sativa Japonica
Group
Length = 174
Score = 111 bits (56), Expect = 6e-24
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 100 ttttttataattagcatttttgttgttataagatgataaaacatgaatagtactttactc 159
|||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 133 ttttttataattagtatttttgttgttacgagatgataaaatatgaatagtactttactc 74
Query: 160 gtgacttatatctttagttttttt 183
||| ||||||| |||| |||||||
Sbjct: 73 gtggcttatatttttatttttttt 50
>RF01062;MIR812;AP008209.1/5420310-5420125 39947:Oryza sativa
Japonica Group
Length = 186
Score = 111 bits (56), Expect = 6e-24
Identities = 90/100 (90%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttata 129
|||| |||||||| ||| |||||| ||||||||| |||||||| |||||| |||||||
Sbjct: 175 ccaattttaatcgttcgttttatttgaaatttttttataattagtatttttattgttatg 116
Query: 130 agatgataaaacatgaatagtactttactcgtgacttata 169
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 115 agatgataaaacataaatagtactttactcgtgacttata 76
>RF01062;MIR812;AP003335.4/153903-154072 39947:Oryza sativa Japonica
Group
Length = 170
Score = 111 bits (56), Expect = 6e-24
Identities = 96/108 (88%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 62 ttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcattttt 120
||||||||| ||| ||| |||| | ||||||||||||||||||| |||||||| |||||
Sbjct: 169 ttttcgcgcacaattttgatcgtctgtcttatttaaaatttttttataattagtattttc 110
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||||||| |||||||||||||||||||| ||||||||| | ||||||
Sbjct: 109 gttgttatgagatgataaaacatgaatagaactttactcataacttat 62
>RF01062;MIR812;AAAA02008846.1/795-964 39946:Oryza sativa Indica
Group
Length = 170
Score = 111 bits (56), Expect = 6e-24
Identities = 108/124 (87%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||| |||||||||| |||| | ||||| ||| ||||||||| |||||||| |||||
Sbjct: 170 gttttcgtgcccaactttgatcgtctgtcttgtttgaaatttttttataattagtatttt 111
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||||||||| ||||||||||| |||||||||| |||| |||||||||| | |||| |||
Sbjct: 110 tgttgttattagatgataaaatatgaatagtattttatacgtgacttatgtttttaattt 51
Query: 180 tttt 183
||||
Sbjct: 50 tttt 47
>RF01062;MIR812;AP003871.3/137479-137311 39947:Oryza sativa Japonica
Group
Length = 169
Score = 111 bits (56), Expect = 6e-24
Identities = 96/108 (88%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 62 ttttcgcgcccaactttaatcgcccgtcttatttaaaat-tttttataattagcattttt 120
|||||||| |||||||| |||| | || |||||||||| |||||||||||| ||||||
Sbjct: 168 ttttcgcgtccaactttgatcgtcggttttatttaaaaactttttataattaatattttt 109
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
|||||||| |||| ||||||||||||||||||||||||| ||||||||
Sbjct: 108 gttgttatgagatcataaaacatgaatagtactttactcatgacttat 61
>RF01062;MIR812;AACV01009794.1/11451-11280 39947:Oryza sativa
Japonica Group
Length = 172
Score = 111 bits (56), Expect = 6e-24
Identities = 108/124 (87%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||| ||||| ||| |||||||| || ||||||| ||||||||| ||||||||||||||
Sbjct: 172 gtttccgcgctcaattttaatcgttcgacttatttgaaatttttttataattagcatttt 113
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
| |||||| ||||||||||||||||||||||||||| | ||||||||| | |||| |||
Sbjct: 112 tattgttacgagatgataaaacatgaatagtactttatttgtgacttatgtttttatttt 53
Query: 180 tttt 183
||||
Sbjct: 52 tttt 49
>RF01062;MIR812;AJ245900.1/3175-3343 4530:Oryza sativa (rice)
Length = 169
Score = 111 bits (56), Expect = 6e-24
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 100 ttttttataattagcatttttgttgttataagatgataaaacatgaatagtactttactc 159
|||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 130 ttttttataattagtatttttgttgttatgagatgataaaacataaatagtactttgctc 71
Query: 160 gtgacttatatctttagttttttt 183
||||||||| | |||| |||||||
Sbjct: 70 gtgacttatgtttttaattttttt 47
>RF01062;MIR812;AAAA02007970.1/6373-6202 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 6e-24
Identities = 80/88 (90%)
Strand = Plus / Minus
Query: 96 aaaattttttataattagcatttttgttgttataagatgataaaacatgaatagtacttt 155
||||||||||||||||||||||||| || ||| |||||||||||||| |||||||||||
Sbjct: 136 aaaattttttataattagcatttttattaatattagatgataaaacataaatagtacttt 77
Query: 156 actcgtgacttatatctttagttttttt 183
||||||||||||| | |||| |||||||
Sbjct: 76 actcgtgacttatgtttttaattttttt 49
>RF01062;MIR812;ABRL01000278.1/1338-1168 65489:Oryza barthii
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 98/111 (88%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttg 124
|||||| || |||||||| || |||||||||||||||||| |||||||| |||||| |||
Sbjct: 166 cgcgcctaattttaatcgtccatcttatttaaaatttttttataattagtatttttattg 107
Query: 125 ttataagatgataaaacatgaatagtactttactcgtgacttatatcttta 175
||| |||||||||||||| |||| ||||||||| ||||||||||| ||||
Sbjct: 106 ctatgagatgataaaacataaataatactttacttgtgacttatattttta 56
>RF01062;MIR812;AAAA02017831.1/48225-48390 39946:Oryza sativa Indica
Group
Length = 166
Score = 109 bits (55), Expect = 2e-23
Identities = 88/98 (89%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataa 130
|||||||| |||| ||||||||||| ||||||||||||||||| |||| ||||||||| |
Sbjct: 156 ccaactttgatcgtccgtcttatttgaaattttttataattagtatttgtgttgttatga 97
Query: 131 gatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||||||| || ||||| |||||||||
Sbjct: 96 gatgataaaacatgaataata--ttacttgtgacttat 61
>RF01062;MIR812;AC119073.1/10812-10640 39947:Oryza sativa Japonica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaa-aattttttataattagcatttttgttgt 125
|||||||||||| |||| |||| |||||| | || ||||||||||||| |||||||||||
Sbjct: 166 gcgcccaactttgatcgtccgttttatttgagaaatttttataattagtatttttgttgt 107
Query: 126 tataagatgataaaacatgaatagtactttactcgtgacttat 168
||| ||||||||||| || ||||||||||||||| ||||||||
Sbjct: 106 tatgagatgataaaatataaatagtactttactcatgacttat 64
Score = 50.1 bits (25), Expect = 2e-05
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 66 cgcgcccaactttaatcgcccgtcttattt-aaaatttttt 105
|||||||||||||||||| | ||||||||| ||||||||||
Sbjct: 7 cgcgcccaactttaatcgtctgtcttatttgaaaatttttt 47
>RF01062;MIR812;AP005175.4/49171-49011 39947:Oryza sativa Japonica
Group
Length = 161
Score = 109 bits (55), Expect = 2e-23
Identities = 86/95 (90%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 90 ttatttaaaat-tttttataattagcatttttgttgttataagatgataaaacatgaata 148
||||||||||| |||||| |||||| |||||| ||||||| | |||||||||||||||||
Sbjct: 132 ttatttaaaatatttttacaattagtatttttattgttatgatatgataaaacatgaata 73
Query: 149 gtactttactcgtgacttatatctttagttttttt 183
|||||||||||||||||||||| || | |||||||
Sbjct: 72 gtactttactcgtgacttatattttcaattttttt 38
>RF01062;MIR812;AAAA02033258.1/7726-7553 39946:Oryza sativa Indica
Group
Length = 174
Score = 109 bits (55), Expect = 2e-23
Identities = 92/104 (88%), Gaps = 4/104 (3%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaa----attttttataattagcat 116
|||| |||| |||| ||| |||| |||||||||||||| |||||||||||||||||
Sbjct: 174 gtttccgcgtccaattttgatcgtccgtcttatttaaatttttttttttataattagcat 115
Query: 117 ttttgttgttataagatgataaaacatgaatagtactttactcg 160
|||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 114 ttttgttgttatgagatgataaaacataaatagtactttactcg 71
>RF01062;MIR812;AACV01019045.1/6084-5913 39947:Oryza sativa Japonica
Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 86 cgtcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatga 145
||||||||||||| |||||||||||||| |||||| ||||| ||||||||||||||||||
Sbjct: 147 cgtcttatttaaatttttttataattagtatttttattgttgtaagatgataaaacatga 88
Query: 146 atagtacttta 156
|||||||||||
Sbjct: 87 atagtacttta 77
>RF01062;MIR812;AAAA02010446.1/17902-18064 39946:Oryza sativa Indica
Group
Length = 163
Score = 109 bits (55), Expect = 2e-23
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 86 cgtcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatga 145
|||||||||| ||||||||| |||||| |||||| ||||||| ||||||||||||||||
Sbjct: 138 cgtcttatttgaaattttttttaattaatatttttattgttatgagatgataaaacatga 79
Query: 146 atagtactttactcgtgacttat 168
||||||||||| |||||||||||
Sbjct: 78 atagtactttattcgtgacttat 56
>RF01062;MIR812;AAAA02017582.1/50910-50736 39946:Oryza sativa Indica
Group
Length = 175
Score = 109 bits (55), Expect = 2e-23
Identities = 94/105 (89%), Gaps = 4/105 (3%)
Strand = Plus / Minus
Query: 68 cgcccaactttaatcgcccgtcttattt-aaaattttttataattagcatttttgttgtt 126
|||| |||||| |||| ||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 168 cgccaaactttgatcgtccgtcttatttgaaaattttttataattagtatttttattgtt 109
Query: 127 ataagatgat---aaaacatgaatagtactttactcgtgacttat 168
|| ||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 108 atgagatgatcataaaacatgaatagtattttactcgtgacttat 64
>RF01062;MIR812;AAAA02020504.1/6865-7035 39946:Oryza sativa Indica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 89/99 (89%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttata 129
|||||||| |||| ||| ||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 161 ccaactttgatcgtccgccttatttgaaatttttttataattagtatttttgttgttatg 102
Query: 130 agatgataaaacatgaatagtactttactcgtgacttat 168
||||||||||||||||||| || |||||| |||||||||
Sbjct: 101 agatgataaaacatgaataatattttacttgtgacttat 63
>RF01062;MIR812;AP008215.1/2023967-2023806 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 2e-23
Identities = 89/99 (89%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 86 cgtcttatttaaaatttttt-ataattagcatttttgttgttataagatgataaaacatg 144
|||||||||| ||||||||| |||||||| |||||| || |||| ||||||||||||||
Sbjct: 136 cgtcttatttgaaatttttttataattagtatttttattattatgagatgataaaacata 77
Query: 145 aatagtactttactcgtgacttatatctttagttttttt 183
|||||||||||||||||||||||| | |||| |||||||
Sbjct: 76 aatagtactttactcgtgacttatgtttttaattttttt 38
>RF01062;MIR812;AACV01015595.1/7698-7548 39947:Oryza sativa Japonica
Group
Length = 151
Score = 109 bits (55), Expect = 2e-23
Identities = 94/107 (87%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
|||| |||| |||||||| |||| |||| |||||| || ||||||||||||| || |||
Sbjct: 151 gtttccgcgtccaactttgatcgtccgttttatttgaatttttttataattaatatcttt 92
Query: 121 gttgttataagatgataaaacatgaatagtactttactcgtgactta 167
||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 91 gttgttataagatgataaaacataaatagtgctatactcgtgactta 45
>RF01062;MIR812;AP008216.1/16946403-16946231 39947:Oryza sativa
Japonica Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 94/106 (88%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 80 atcgcccgtcttatttaaaatttttt--ataattagcatttttgttgttataagatgata 137
|||| |||||||||||||| |||||| |||||||| || ||||||||||||||||||||
Sbjct: 154 atcgtccgtcttatttaaatttttttttataattagtatatttgttgttataagatgata 95
Query: 138 aaacatgaatagtactttactcgtgacttatatctttagttttttt 183
|||||| ||||||| |||||||||||||| | | |||| |||||||
Sbjct: 94 aaacattaatagtattttactcgtgacttgtgtttttaattttttt 49
>RF01062;MIR812;AP008209.1/26520610-26520441 39947:Oryza sativa
Japonica Group
Length = 170
Score = 109 bits (55), Expect = 2e-23
Identities = 101/115 (87%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 69 gcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttat 128
||||||||||||| | |||||||||| |||| ||||||||| ||||||||||||||
Sbjct: 162 gcccaactttaattgtttgtcttatttatttttttatataattagtatttttgttgttat 103
Query: 129 aagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
|||||||||| ||||||||||| |||||||||||||||||| |||| |||||||
Sbjct: 102 gagatgataaa-catgaatagtaatttactcgtgacttatatttttaattttttt 49
>RF01062;MIR812;AAAA02004773.1/6937-7109 39946:Oryza sativa Indica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 77/83 (92%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 76 tttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataagatg 134
|||||||| ||||||||||| ||||||||| ||||||| |||||||||||||| |||||
Sbjct: 158 tttaatcgtccgtcttatttgaaatttttttataattaatatttttgttgttatgagatg 99
Query: 135 ataaaacatgaatagtactttac 157
|||||||||||||||||||||||
Sbjct: 98 ataaaacatgaatagtactttac 76
>RF01062;MIR812;AP008213.1/402425-402255 39947:Oryza sativa Japonica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 106/122 (86%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt--ataattagcattt 118
||||||||| ||||||||||||| || |||||||| ||||||||| ||||||| ||||
Sbjct: 171 gttttcgcgtccaactttaatcgtccatcttatttgaaattttttttataattaatattt 112
Query: 119 ttgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtt 178
||||| |||| ||||||||||| |||| | ||| |||||||||||||||||| |||| ||
Sbjct: 111 ttgttattatgagatgataaaatatgatttgtattttactcgtgacttatatttttaatt 52
Query: 179 tt 180
||
Sbjct: 51 tt 50
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 62 ttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt 105
||||||||||||||||||| || |||||||||||||||| ||||
Sbjct: 2 ttttcgcgcccaactttaaccgtccgtcttatttaaaatatttt 45
>RF01062;MIR812;AP008208.1/8356599-8356762 39947:Oryza sativa
Japonica Group
Length = 164
Score = 107 bits (54), Expect = 9e-23
Identities = 89/98 (90%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaatttttt-ataattagcat-ttttgttgttataa 130
||||||||| | ||||||||||||||||||||| ||||||| || |||| || ||||||
Sbjct: 151 aactttaattgtccgtcttatttaaaatttttttataattaatatattttattattataa 92
Query: 131 gatgataaaacatgaatagtactttactcgtgacttat 168
||||||||||||||||||||||||||| ||||||||||
Sbjct: 91 gatgataaaacatgaatagtactttacccgtgacttat 54
>RF01062;MIR812;AACV01017236.1/11638-11467 39947:Oryza sativa
Japonica Group
Length = 172
Score = 107 bits (54), Expect = 9e-23
Identities = 112/133 (84%), Gaps = 1/133 (0%)
Strand = Plus / Minus
Query: 100 ttttttataattagcatttttgttgttataag-atgataaaacatgaatagtactttact 158
|||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 133 ttttttataattaggatttttgttgttataaggatgataaaagatgaatagtactttact 74
Query: 159 cgtgacttatatctttagtttttttnnnnnnnnntttaaataaaacgaatggtcaaagtt 218
||||||||| | |||| |||| || ||||||||| | ||||||| ||||||
Sbjct: 73 ggtgacttatgtttttaattttgtttaaaaaatttttaaataagatgaatggttaaagtt 14
Query: 219 gggcgcggaaaac 231
| |||||||||||
Sbjct: 13 gagcgcggaaaac 1
>RF01062;MIR812;AP003314.3/74968-74797 39947:Oryza sativa Japonica
Group
Length = 172
Score = 107 bits (54), Expect = 9e-23
Identities = 84/94 (89%)
Strand = Plus / Minus
Query: 90 ttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaatag 149
|||||| ||| |||||||||||| |||||| ||||||| |||||||||||||||||||
Sbjct: 143 ttatttgaaaatttttataattaatatttttattgttatgagatgataaaacatgaatat 84
Query: 150 tactttactcgtgacttatatctttagttttttt 183
||||||||||||||||||| | |||| |||||||
Sbjct: 83 tactttactcgtgacttatgtttttaattttttt 50
>RF01062;MIR812;AAAA02021742.1/8892-8725 39946:Oryza sativa Indica
Group
Length = 168
Score = 107 bits (54), Expect = 9e-23
Identities = 88/98 (89%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 85 ccgtcttatttaaaatttttt-ataattagcatttttgttgttataagatgataaaacat 143
||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||
Sbjct: 144 ccgtcttatttaaaatttttttataattagcatttttgttgttatgagataataaaacat 85
Query: 144 gaatagtactttactcgtgacttatatctttagttttt 181
|||| ||||||||| |||| |||| | |||| |||||
Sbjct: 84 aaatattactttacttgtgatttatgtttttatttttt 47
>RF01062;MIR812;AAAA02003647.1/3308-3140 39946:Oryza sativa Indica
Group
Length = 169
Score = 107 bits (54), Expect = 9e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataa 130
|||||||| |||| |||||||||||||| |||||||||||| | |||||| ||||||| |
Sbjct: 159 ccaactttgatcgtccgtcttatttaaatttttttataattggtatttttattgttatga 100
Query: 131 gatgataaaacatgaatagtacttta 156
|||||||||| |||||||||||||||
Sbjct: 99 gatgataaaatatgaatagtacttta 74
>RF01062;MIR812;AACV01002106.1/12557-12390 39947:Oryza sativa
Japonica Group
Length = 168
Score = 107 bits (54), Expect = 9e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataa 130
|||| |||||||| ||||||||||| ||||||||||||||||| |||||| ||||||| |
Sbjct: 158 ccaattttaatcgtccgtcttatttgaaattttttataattagtatttttattgttatga 99
Query: 131 gatgataaaacatgaatagtacttta 156
|||||||||| || ||||||||||||
Sbjct: 98 gatgataaaatattaatagtacttta 73
>RF01062;MIR812;AAAA02009487.1/5039-4872 39946:Oryza sativa Indica
Group
Length = 168
Score = 107 bits (54), Expect = 9e-23
Identities = 106/122 (86%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 62 ttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttg 121
|||||||| |||||||||||| | || |||||||||| |||||||||| |||||||
Sbjct: 167 ttttcgcgtccaactttaatcatctgttttatttaaaa-aaattataattagtatttttg 109
Query: 122 ttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttttt 181
||||||||| ||||||||||||||||| |||||||||||| |||||| | |||| |||||
Sbjct: 108 ttgttataaaatgataaaacatgaataatactttactcgtaacttatgtttttaattttt 49
Query: 182 tt 183
||
Sbjct: 48 tt 47
>RF01062;MIR812;AP008212.1/22891780-22891599 39947:Oryza sativa
Japonica Group
Length = 182
Score = 107 bits (54), Expect = 9e-23
Identities = 78/85 (91%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 66 cgcgcccaactttaatcgcccgtcttatttaaaatttttt--ataattagcatttttgtt 123
|||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||
Sbjct: 177 cgcgtccaactttaatcgtccgtcttatttaaaattttttttataattagtatttttgtt 118
Query: 124 gttataagatgataaaacatgaata 148
|||| |||||||||||||||||||
Sbjct: 117 attatgagatgataaaacatgaata 93
>RF01062;MIR812;AP008211.1/24592306-24592476 39947:Oryza sativa
Japonica Group
Length = 171
Score = 107 bits (54), Expect = 9e-23
Identities = 76/82 (92%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 88 tcttatttaaaatttttt-ataattagcatttttgttgttataagatgataaaacatgaa 146
|||||||||||||||||| |||||||| |||||| ||||||| |||||||||||||||||
Sbjct: 144 tcttatttaaaatttttttataattagtatttttattgttatgagatgataaaacatgaa 85
Query: 147 tagtactttactcgtgacttat 168
|| || ||||||||||||||||
Sbjct: 84 taataatttactcgtgacttat 63
>RF01062;MIR812;AP004998.2/55548-55721 39947:Oryza sativa Japonica
Group
Length = 174
Score = 107 bits (54), Expect = 9e-23
Identities = 112/133 (84%), Gaps = 1/133 (0%)
Strand = Plus / Minus
Query: 100 ttttttataattagcatttttgttgttataagatgataaaacatgaatagtacttta-ct 158
|||||||||||||||||||||||||| || | ||||||||| ||||||||||||||| ||
Sbjct: 133 ttttttataattagcatttttgttgtcatgaaatgataaaatatgaatagtactttacct 74
Query: 159 cgtgacttatatctttagtttttttnnnnnnnnntttaaataaaacgaatggtcaaagtt 218
|||||||||| | |||| ||||||| || |||||| ||||| ||||||||||
Sbjct: 73 cgtgacttatgtttttaattttttttaaaaaattttcaaataagacgaacggtcaaagtt 14
Query: 219 gggcgcggaaaac 231
|| ||||||||||
Sbjct: 13 ggacgcggaaaac 1
>RF01062;MIR812;AAAA02021889.1/14885-15055 39946:Oryza sativa Indica
Group
Length = 171
Score = 107 bits (54), Expect = 9e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 87 gtcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaa 146
||||||||||||||||||||||||||| |||||| || |||| |||||||||||||||||
Sbjct: 145 gtcttatttaaaattttttataattagtatttttattattatgagatgataaaacatgaa 86
Query: 147 tagtacttta 156
||||||||||
Sbjct: 85 tagtacttta 76
>RF01062;MIR812;AACV01001141.1/8371-8200 39947:Oryza sativa Japonica
Group
Length = 172
Score = 107 bits (54), Expect = 9e-23
Identities = 76/82 (92%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 88 tcttatttaaaatttttt-ataattagcatttttgttgttataagatgataaaacatgaa 146
|||||||| ||||||||| ||||||||||||||||||||||| | ||||||||| |||||
Sbjct: 145 tcttatttgaaattttttcataattagcatttttgttgttatgaaatgataaaatatgaa 86
Query: 147 tagtactttactcgtgacttat 168
||||||||||||| ||||||||
Sbjct: 85 tagtactttactcatgacttat 64
>RF01062;MIR812;AAAA02007218.1/82249-82418 39946:Oryza sativa Indica
Group
Length = 170
Score = 107 bits (54), Expect = 9e-23
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataa 130
|||||||| || | |||| |||||| || ||||||||||||| |||||||||||||| |
Sbjct: 160 ccaactttgatagtccgttttatttgaatttttttataattaatatttttgttgttatga 101
Query: 131 gatgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||||||| ||||||| |||||||||||
Sbjct: 100 gatgataaaacatgaataatactttattcgtgacttat 63
>RF01062;MIR812;AACV01003947.1/10244-10083 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 9e-23
Identities = 88/97 (90%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataag 131
|||||| |||| |||||||||||||| |||||| |||||||| |||| |||||||| ||
Sbjct: 150 aactttgatcgtccgtcttatttaaattttttttataattagtattt--gttgttatgag 93
Query: 132 atgataaaacatgaatagtactttactcgtgacttat 168
|| ||||||||||||||||||||||||||||||||||
Sbjct: 92 ataataaaacatgaatagtactttactcgtgacttat 56
>RF01062;MIR812;CR855167.1/66190-66024 4530:Oryza sativa (rice)
Length = 167
Score = 107 bits (54), Expect = 9e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataa 130
|||| ||| |||| ||||||||||| || |||||||||||||| |||||| |||||||||
Sbjct: 157 ccaattttgatcgtccgtcttattttaatttttttataattagtatttttattgttataa 98
Query: 131 gatgataaaacatgaatagtacttta 156
||| ||||||||||||||||||||||
Sbjct: 97 gattataaaacatgaatagtacttta 72
>RF01058;MIR806;AACV01003457.1/7153-7393 39947:Oryza sativa Japonica
Group
Length = 241
Score = 107 bits (54), Expect = 9e-23
Identities = 88/98 (89%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 60 agttttcgcgcccaactttaatcgcccgtcttatttaaaatttt-ttataattagcattt 118
|||||||| |||||||||| ||| ||||||||||| || |||| |||||||||| ||||
Sbjct: 35 agttttcgtgcccaactttgatcatccgtcttatttgaactttttttataattagtattt 94
Query: 119 ttgttgttataagatgataaaacatgaatagtacttta 156
|| ||||||| |||||||||||||||||||||||||||
Sbjct: 95 ttcttgttatgagatgataaaacatgaatagtacttta 132
Score = 48.1 bits (24), Expect = 7e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 56 catgagttttcgcgcccaactttaatcgcccgtcttattt 95
||||| ||| || ||||||||||||||| |||||||||||
Sbjct: 211 catgattttccgtgcccaactttaatcgtccgtcttattt 172
>RF01062;MIR812;AAAA02025560.1/18144-18312 39946:Oryza sativa Indica
Group
Length = 169
Score = 105 bits (53), Expect = 3e-22
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 85 ccgtcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatg 144
||||||||||| ||| ||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 145 ccgtcttatttgaaactttttataattagcatttt-gttgttatgagatgataaaacatg 87
Query: 145 aatagtactttactcgt 161
||||||| |||||||||
Sbjct: 86 aatagtattttactcgt 70
>RF01062;MIR812;AACV01025420.1/209-362 39947:Oryza sativa Japonica
Group
Length = 154
Score = 105 bits (53), Expect = 3e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataag 131
|||||| |||| | ||||||||||||||||||| |||||||| |||||| ||||||| ||
Sbjct: 142 aactttgatcgtctgtcttatttaaaatttttttataattagtatttttattgttatgag 83
Query: 132 atgataaaacatgaatagtactttactcgtgacttat 168
||||||||||||||| ||| ||||||||||||||||
Sbjct: 82 atgataaaacatgaacagttttttactcgtgacttat 46
>RF01062;MIR812;AP008212.1/18810223-18810054 39947:Oryza sativa
Japonica Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 131/160 (81%)
Strand = Plus / Minus
Query: 71 ccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataa 130
|||| ||| |||| ||||||||||| ||||| ||| |||||| |||||||||||||| |
Sbjct: 160 ccaattttgatcgtccgtcttatttgaaattatttttaattaatatttttgttgttatga 101
Query: 131 gatgataaaacatgaatagtactttactcgtgacttatatctttagtttttttnnnnnnn 190
|||||||||||||||||| |||||||||| |||| ||| | |||| ||||||
Sbjct: 100 gatgataaaacatgaatattactttactcatgacatatgtttttaattttttaaaaaaca 41
Query: 191 nntttaaataaaacgaatggtcaaagttgggcgcggaaaa 230
|| |||||| ||||| ||| ||||||||||||||||||
Sbjct: 40 ttttcaaataagacgaacggttaaagttgggcgcggaaaa 1
>RF01062;MIR812;AP008208.1/12857069-12856898 39947:Oryza sativa
Japonica Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 78/85 (91%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 85 ccgtcttatttaaaatttttt-ataattagcatttttgttgttataagatgataaaacat 143
||||||||||| ||||||||| |||||||| |||||| ||||||| ||||||||||||||
Sbjct: 148 ccgtcttatttgaaatttttttataattagtatttttattgttatgagatgataaaacat 89
Query: 144 gaatagtactttactcgtgacttat 168
||||||||||||| ||||||||||
Sbjct: 88 gaatagtactttatacgtgacttat 64
>RF01062;MIR812;AP008207.1/36403836-36403667 39947:Oryza sativa
Japonica Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 67 gcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgt 125
|||| ||||||| |||| |||||||||||||| |||||| || ||||| |||||| ||||
Sbjct: 163 gcgctcaactttgatcgtccgtcttatttaaattttttttatgattagtatttttattgt 104
Query: 126 tataagatgataaaacatgaatagtactttactcgtg 162
||| |||||||||||||| ||||||||||||||||||
Sbjct: 103 tatgagatgataaaacataaatagtactttactcgtg 67
>RF01062;MIR812;AL845342.2/104516-104684 4530:Oryza sativa (rice)
Length = 169
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 88 tcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaat 147
||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 142 tcttatttaaatttttttataattagtatttttgttgttatgagatgataaaacataaat 83
Query: 148 agtacttta 156
|||||||||
Sbjct: 82 agtacttta 74
>RF01062;MIR812;AP008211.1/22838411-22838250 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 3e-22
Identities = 74/81 (91%)
Strand = Plus / Minus
Query: 103 tttataattagcatttttgttgttataagatgataaaacatgaatagtactttactcgtg 162
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 118 tttataattagcatttttgttgttataagataataaaacataaatagtactttactcgta 59
Query: 163 acttatatctttagttttttt 183
|| ||| | |||| |||||||
Sbjct: 58 acatatgtttttaattttttt 38
>RF01062;MIR812;AP008209.1/12985681-12985847 39947:Oryza sativa
Japonica Group
Length = 167
Score = 105 bits (53), Expect = 3e-22
Identities = 96/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatt-ttttataattagcatttt 119
||||||| ||| |||||| || | |||| ||| || ||||| |||||||||||| |||||
Sbjct: 167 gttttcgtgcctaactttgatagtccgttttacttcaaattcttttataattagtatttt 108
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 168
||||||||||||||||||||||||||||| || |||| |||||||||||
Sbjct: 107 tgttgttataagatgataaaacatgaataatattttaatcgtgacttat 59
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 69 gcccaactttaatcgcccgtcttatttaaaatttttt 105
||||||||||||||| ||||||||||||||| ||||
Sbjct: 10 gcccaactttaatcgttcgtcttatttaaaatatttt 46
>RF01062;MIR812;AP001366.1/19470-19642 39947:Oryza sativa Japonica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataag 131
||||||||||| ||||||||||| ||||||||| ||||||| ||||||||| |||| ||
Sbjct: 161 aactttaatcgtccgtcttatttgaaatttttttataattaatatttttgttattatgag 102
Query: 132 atgataaaacatgaatagtactttactcgtgacttat 168
|||||||||||||| |||||||||| ||||||||||
Sbjct: 101 atgataaaacatgagtagtactttatgcgtgacttat 65
>RF01062;MIR812;AL606626.3/62894-63049 39947:Oryza sativa Japonica
Group
Length = 156
Score = 105 bits (53), Expect = 3e-22
Identities = 78/85 (91%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataag 131
||||||||||| ||||||||||||| |||||| |||||||| |||||||||||||| ||
Sbjct: 144 aactttaatcgttcgtcttatttaaattttttttataattagtatttttgttgttatgag 85
Query: 132 atgataaaacatgaatagtacttta 156
||||||||| |||||||||||||||
Sbjct: 84 atgataaaatatgaatagtacttta 60
>RF01062;MIR812;AY946455.1/29-199 4530:Oryza sativa (rice)
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 100 ttttttataattagcatttttgttgttataagatgataaaacatgaatagtactttactc 159
||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||
Sbjct: 131 ttttttataattagcatttttgttgttatgagatgataaaacgtgagtagtactttactc 72
Query: 160 gtgacttat 168
||||||||
Sbjct: 71 ctgacttat 63
>RF01062;MIR812;AP008208.1/15408252-15408424 39947:Oryza sativa
Japonica Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 104 ttataattagcatttttgttgttataagatgataaaacatgaatagtactttactcgtga 163
|||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 129 ttataattagtatttgtgttgttatgagatgataaaacatgaatagtactttactcgtga 70
Query: 164 cttat 168
|||||
Sbjct: 69 cttat 65
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 71 ccaactttaatcgcccgtcttatttaaaatttttta 106
|||||||| |||| ||||||||||| ||||||||||
Sbjct: 11 ccaactttgatcgtccgtcttatttgaaatttttta 46
>RF01062;MIR812;AACV01003457.1/7358-7188 39947:Oryza sativa Japonica
Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||| |||||||||| ||| ||||||||||| || |||||| |||||||| |||||
Sbjct: 171 gttttcgtgcccaactttgatcatccgtcttatttgaactttttttataattagtatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtacttta 156
| ||||||| |||||||||||||||||||||||||||
Sbjct: 111 tcttgttatgagatgataaaacatgaatagtacttta 75
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 gcccaactttaatcgcccgtcttattt 95
||||||||||||||| |||||||||||
Sbjct: 9 gcccaactttaatcgtccgtcttattt 35
>RF01062;MIR812;AP008208.1/8960133-8959964 39947:Oryza sativa
Japonica Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 78/85 (91%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttattt-aaaattttttataattagcatttttgttgttataag 131
||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 158 aactttaatcgtccgtcttatttgaaaattttttataattaatatttttgttgttatgag 99
Query: 132 atgataaaacatgaatagtacttta 156
||||||||| || ||||||||||||
Sbjct: 98 atgataaaatattaatagtacttta 74
>RF01062;MIR812;AL844878.4/87591-87762 4530:Oryza sativa (rice)
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgttataag 131
|||||| |||| | |||||||||||| |||||| ||||||| ||||||| ||||||||||
Sbjct: 160 aactttgatcgtctgtcttatttaaattttttttataattaccatttttattgttataag 101
Query: 132 atgataaaacatgaatagtactttactcgtgacttat 168
||||||||| |||||||| ||||||||| ||||||||
Sbjct: 100 atgataaaatatgaataggactttactcatgacttat 64
>RF01062;MIR812;AAAA02030087.1/8995-9151 39946:Oryza sativa Indica
Group
Length = 157
Score = 103 bits (52), Expect = 1e-21
Identities = 77/84 (91%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 85 ccgtcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatg 144
||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 133 ccgtcttatttaat-ttttttataattagtatttttgttgttatgagatgataaaacatg 75
Query: 145 aatagtactttactcgtgacttat 168
|||| ||||||| ||||||||||
Sbjct: 74 aataatactttatgcgtgacttat 51
>RF01062;MIR812;AAAA02033303.1/7977-8146 39946:Oryza sativa Indica
Group
Length = 170
Score = 103 bits (52), Expect = 1e-21
Identities = 85/96 (88%)
Strand = Plus / Minus
Query: 73 aactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataaga 132
|||||| |||| |||| ||||||||| |||||||||| ||| |||||||||||||| |||
Sbjct: 158 aactttgatcgtccgttttatttaaatttttttataaatagtatttttgttgttatgaga 99
Query: 133 tgataaaacatgaatagtactttactcgtgacttat 168
||||||||||| ||||||| |||| | |||||||||
Sbjct: 98 tgataaaacataaatagtattttatttgtgacttat 63
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 62 ttttcgcgcccaactttaatcgcccgtcttatttaaaatttttta 106
|||||||| |||||||||| || ||||||||||||| |||||||
Sbjct: 2 ttttcgcgtccaactttaaccgttcgtcttatttaaattttttta 46
>RF01062;MIR812;AP005422.3/96967-96801 39947:Oryza sativa Japonica
Group
Length = 167
Score = 103 bits (52), Expect = 1e-21
Identities = 101/116 (87%), Gaps = 6/116 (5%)
Strand = Plus / Minus
Query: 69 gcccaactttaatcgcccgtcttattt-aaaattttttataattagcatttttgttgtta 127
|||||| |||||||| ||||||||||| ||||||||||||||||| ||||| |||
Sbjct: 159 gcccaattttaatcgtccgtcttatttaaaaattttttataattaatatttt-----tta 105
Query: 128 taagatgataaaacatgaatagtactttactcgtgacttatatctttagttttttt 183
||||||||||||| |||||||||||||| |||||||||||| | |||| |||||||
Sbjct: 104 taagatgataaaatatgaatagtactttgctcgtgacttatgtttttatttttttt 49
>RF01062;MIR812;AACV01022766.1/13309-13482 39947:Oryza sativa
Japonica Group
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 80/88 (90%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 69 gcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgtta 127
|||||||||| |||| ||||||||||| ||||||||| |||||||| |||||||||||||
Sbjct: 166 gcccaactttgatcgtccgtcttatttgaaatttttttataattagtatttttgttgtta 107
Query: 128 taagatgataaaacatgaatagtacttt 155
| ||||||||||| ||||||| ||||||
Sbjct: 106 tgagatgataaaatatgaataatacttt 79
>RF01062;MIR812;AACV01002156.1/15981-15811 39947:Oryza sativa
Japonica Group
Length = 171
Score = 103 bits (52), Expect = 1e-21
Identities = 107/124 (86%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
|||||| ||| ||||||| |||| ||||||||||| ||||||||| | |||||| |||||
Sbjct: 171 gttttcacgctcaactttgatcgtccgtcttatttgaaatttttttacaattagtatttt 112
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
| ||||||| ||||||||||||||||||| || |||| |||| |||||| | |||| |||
Sbjct: 111 tattgttatgagatgataaaacatgaataatattttattcgttacttatgtttttaattt 52
Query: 180 tttt 183
||||
Sbjct: 51 tttt 48
>RF01062;MIR812;AP008214.1/25418777-25418947 39947:Oryza sativa
Japonica Group
Length = 171
Score = 103 bits (52), Expect = 1e-21
Identities = 89/100 (89%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 69 gcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttttgttgtta 127
||||||||||||||| ||||||||||| || |||||| |||||| |||||||| ||||||
Sbjct: 163 gcccaactttaatcgtccgtcttatttgaattttttttataatttgcatttttattgtta 104
Query: 128 taagatgataaaacatgaatagtactttactcgtgactta 167
| |||||||||| ||||||||||||||| |||||||||
Sbjct: 103 tgggatgataaaatatgaatagtactttatacgtgactta 64
>RF01062;MIR812;AY946410.1/199-31 4530:Oryza sativa (rice)
Length = 169
Score = 103 bits (52), Expect = 1e-21
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 100 ttttttataattagcatttttgttgttataagatgataaaacatgaatagtactttactc 159
|||||||||||||| |||||| ||||||| |||||||||||| ||||||||||||| |||
Sbjct: 129 ttttttataattagtatttttattgttatgagatgataaaacgtgaatagtactttgctc 70
Query: 160 gtgacttatatctttagttttttt 183
||||||||| | |||| |||||||
Sbjct: 69 gtgacttatgtttttaattttttt 46
>RF01062;MIR812;AC212268.1/23505-23677 4538:Oryza glaberrima
(African rice)
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 107/124 (86%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttattt-aaaattttttataattagcatttt 119
|||| |||||| ||||||| ||| | ||||||||| ||||||| || ||||||| |||||
Sbjct: 173 gtttccgcgccaaactttagtcgtctgtcttatttgaaaatttgttgtaattagtatttt 114
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
||| ||||||||||||||||||||||||| ||||||| ||||||| || | |||| |||
Sbjct: 113 tgtcgttataagatgataaaacatgaataatactttatacgtgactaatgtttttaattt 54
Query: 180 tttt 183
||||
Sbjct: 53 tttt 50
>RF01062;MIR812;AP008218.1/19153017-19152856 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 107/124 (86%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaatttttt-ataattagcatttt 119
||||||| | |||| |||||||| |||||||||||||| |||||| |||||||| |||||
Sbjct: 162 gttttcgtgtccaattttaatcgtccgtcttatttaaattttttttataattagtatttt 103
Query: 120 tgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagttt 179
| |||||||||||||||||||||||| |||| ||| ||||||||||| |||| |||
Sbjct: 102 tattgttataagatgataaaacatgataagtatcttatgtgtgacttatatttttaattt 43
Query: 180 tttt 183
||||
Sbjct: 42 tttt 39
>RF01062;MIR812;AL732646.5/74405-74574 4530:Oryza sativa (rice)
Length = 170
Score = 103 bits (52), Expect = 1e-21
Identities = 86/96 (89%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 61 gttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcattttt 120
||||||| | |||| |||||||| |||| |||||||||||||||||||||||| | ||||
Sbjct: 170 gttttcgtgtccaattttaatcgtccgtattatttaaaattttttataattagta-tttt 112
Query: 121 gttgttataagatgataaaacatgaatagtacttta 156
||||||| ||||||||||||||||||| |||||||
Sbjct: 111 attgttatgagatgataaaacatgaataatacttta 76
>RF01062;MIR812;AP008214.1/8842812-8842970 39947:Oryza sativa
Japonica Group
Length = 159
Score = 103 bits (52), Expect = 1e-21
Identities = 89/100 (89%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 85 ccgtcttattt-aaaattttttataattagcatttttgttgttataagatgataaaacat 143
||||||||||| |||| |||||||||||| |||||||||||||| |||| |||||||||
Sbjct: 135 ccgtcttatttgaaaaaattttataattagtatttttgttgttatgagataataaaacat 76
Query: 144 gaatagtactttactcgtgacttatatctttagttttttt 183
|||||||||||| ||||||||||| | |||| |||||||
Sbjct: 75 aaatagtactttattcgtgacttatgtttttaattttttt 36
>RF01062;MIR812;AC133008.3/46362-46533 39947:Oryza sativa Japonica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 69 gcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttat 128
|||||||||| |||| |||||||||||| |||||||||||||| |||||| ||| |||
Sbjct: 164 gcccaactttgatcgttcgtcttatttaattttttttataattagtatttttattgctat 105
Query: 129 aagatgataaaacatgaatagtacttta 156
|||||||||||||||||||||||||||
Sbjct: 104 gagatgataaaacatgaatagtacttta 77
