miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00445;mir-399;ABXC01004408.1/291013-291114 4558:Sorghum bicolor
(sorghum)
Length = 102
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 95 tgccaaaggagagttgccctgtaac 119
|||||||||||||||||||||||||
Sbjct: 72 tgccaaaggagagttgccctgtaac 96
>RF00445;mir-399;DQ063659.1/70-185 3702:Arabidopsis thaliana (thale
cress)
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 95 tgccaaaggagagttgccctgtaactg 121
|||||||||||||||||||||| ||||
Sbjct: 85 tgccaaaggagagttgccctgtcactg 111
>RF00445;mir-399;AC155803.26/43739-43832 3880:Medicago truncatula
(barrel medic)
Length = 94
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgccaaaggagagttgccctgt 116
||||||||||||||||||||||
Sbjct: 64 tgccaaaggagagttgccctgt 85
>RF00445;mir-399;BABK01105304.1/403-505 34305:Lotus japonicus
Length = 103
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgccaaaggagagttgccctgt 116
||||||||||||||||||||||
Sbjct: 73 tgccaaaggagagttgccctgt 94
>RF00445;mir-399;AP007308.2/25934-26026 34305:Lotus japonicus
Length = 93
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgccaaaggagagttgccctgt 116
||||||||||||||||||||||
Sbjct: 63 tgccaaaggagagttgccctgt 84
