miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 145 bits (73), Expect = 2e-34
Identities = 106/117 (90%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| |||||||||||||||| | | |||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagtt 64
Query: 74 ctagatacatccatttttatccatttgagcgacaagctttttgggacggagggagta 130
|||||||||||||||||||| ||||| ||||||| |||||||||||||||||||
Sbjct: 65 ctagatacatccatttttatgcatttctacgacaagtattttgggacggagggagta 121
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 145 bits (73), Expect = 2e-34
Identities = 106/117 (90%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| |||||||||||||||| | | |||||||||||||||| |||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagtt 62
Query: 74 ctagatacatccatttttatccatttgagcgacaagctttttgggacggagggagta 130
|||||||||||||||||||| ||||| ||||||| |||||||||||||||||||
Sbjct: 61 ctagatacatccatttttatgcatttctacgacaagtattttgggacggagggagta 5
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 137 bits (69), Expect = 5e-32
Identities = 105/117 (89%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 121 tactccctctgtccggaaatacttgtcagaggaatggatgtacctagacgtattttagtt 62
Query: 74 ctagatacatccatttttatccatttgagcgacaagctttttgggacggagggagta 130
|||||||||||||||||||| ||||| ||||||| ||| ||||||||||||||
Sbjct: 61 ctagatacatccatttttatgcatttctccgacaagtatttcaggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatg 49
|||||||||| ||| |||||||||||| ||||||||
Sbjct: 5 tactccctccgtcctgaaatacttgtcggagaaatg 40
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 131 bits (66), Expect = 3e-30
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 12 actactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttag 71
||||||||| || ||||||||||||||||| || |||||||||||||||| |||||||||
Sbjct: 3 actactcccgccgtccggaaatacttgtcataggaatggatgtatctagatgtattttag 62
Query: 72 ttctagatacatccatttttatccatttgagcgacaag 109
||||||||||||||||||||||| |||| ||||||||
Sbjct: 63 ttctagatacatccatttttatcaatttatgcgacaag 100
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 131 bits (66), Expect = 3e-30
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| |||| || || ||||| ||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagtt 64
Query: 74 ctagatacatccatttttatccattt 99
||||||||||||||||||||||||||
Sbjct: 65 ctagatacatccatttttatccattt 90
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 129 bits (65), Expect = 1e-29
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 27 cggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagatacatcca 86
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 18 cggatatacttgtcagagaaatggatgtatctagacgtattttacttctagatacatcca 77
Query: 87 tttttatccattt 99
|||||||||||||
Sbjct: 78 tttttatccattt 90
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 127 bits (64), Expect = 4e-29
Identities = 88/96 (91%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| |||||||||||||||| |||||||| || |||||||| |||||||| ||
Sbjct: 121 tactccctccgtccggaaatacttgtcggagaaatgaatctatctagatgtattttaatt 62
Query: 74 ctagatacatccatttttatccatttgagcgacaag 109
|||||||||||||||||||||||||| ||||||||
Sbjct: 61 ctagatacatccatttttatccatttatgcgacaag 26
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 123 bits (62), Expect = 7e-28
Identities = 80/86 (93%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| ||||||| || |||||| |||||||||||||||||||||||||||||||
Sbjct: 121 tactccctccgtccggaattatttgtcatagaaatggatgtatctagacgtattttagtt 62
Query: 74 ctagatacatccatttttatccattt 99
|||||||||||||||| | |||||||
Sbjct: 61 ctagatacatccatttctttccattt 36
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 121 bits (61), Expect = 3e-27
Identities = 103/117 (88%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
||||||||| |||||||||| |||||| || |||||||||||||||| |||||||||||
Sbjct: 5 tactccctctgtccggaaatatttgtcataggaatggatgtatctagatgtattttagtt 64
Query: 74 ctagatacatccatttttatccatttgagcgacaagctttttgggacggagggagta 130
||||||| ||||||||||||||||||| | |||||| || ||||||||||||||
Sbjct: 65 ctagatatatccatttttatccatttgtgtgacaagtaattccggacggagggagta 121
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 119 bits (60), Expect = 1e-26
Identities = 106/120 (88%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatcta-gacgtattttagt 72
|||||||||| |||| ||||||||||| ||| |||||||||||| | || ||||||||||
Sbjct: 122 tactccctccgtccgaaaatacttgtccgaggaatggatgtatcaaagatgtattttagt 63
Query: 73 tctagatacatccatttttatccatttgagcgacaagctttttgggacggagggagtact 132
||||||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 62 tctagatacatccatttatatccatttctgcgacaagtatttccggacggagggagtact 3
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggat 52
|||||||||| |||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgcagaaatggat 43
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 115 bits (58), Expect = 2e-25
Identities = 79/86 (91%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtctgagaaattgatgtatctagacgtattttagtt 64
Query: 74 ctagatacatccatttttatccattt 99
||| |||||| |||||| ||||||||
Sbjct: 65 ctaaatacattcattttaatccattt 90
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 113 bits (57), Expect = 7e-25
Identities = 82/89 (92%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 12 actactccctccatccggaaatacttgtcagagaaatggatgtatctagacgta-tttta 70
|||||||||||||||||||||||| |||| ||||||| |||||||||| ||||| |||||
Sbjct: 123 actactccctccatccggaaatacctgtcggagaaatagatgtatctaaacgtattttta 64
Query: 71 gttctagatacatccatttttatccattt 99
||||||||||||| |||||||| ||||||
Sbjct: 63 gttctagatacattcatttttacccattt 35
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 105 bits (53), Expect = 2e-22
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 12 actactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttag 71
||||||||||| |||| |||||||||||| || |||| |||||||||| |||||||||
Sbjct: 3 actactccctctgtccgaaaatacttgtcattgagatgggtgtatctagatgtattttag 62
Query: 72 ttctagatacatccatttttatccatttgagcgacaagctttttgggacggagggagtac 131
|||||||||||| ||||||||||||||| |||||| |||| |||| ||||||||||
Sbjct: 63 ttctagatacattcatttttatccattttgatgacaagtattttcggacagagggagtac 122
Query: 132 t 132
|
Sbjct: 123 t 123
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| | ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 111 tactccctccgttcggaattacttgtctcagaaatggatgtatctagacgtattttagtt 52
Query: 74 ctagatacatccatttt 90
||||||| |||||||||
Sbjct: 51 ctagatagatccatttt 35
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 103 bits (52), Expect = 6e-22
Identities = 85/96 (88%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
||||||||||||||| ||||||||| || || |||| ||||||||||| ||||||||||
Sbjct: 121 tactccctccatccgaaaatacttggcataggaatgtatgtatctagatatattttagtt 62
Query: 74 ctagatacatccatttttatccatttgagcgacaag 109
|||||||||| ||||||||| ||||| ||||||||
Sbjct: 61 ctagatacattcatttttatatatttgtgcgacaag 26
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 12 actactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttag 71
|||||||||||| |||| |||||||||||| ||||||||| |||||||| |||||||||
Sbjct: 113 actactccctccgtccgaaaatacttgtcattgaaatggatatatctagatgtattttag 54
Query: 72 ttctagatacatccatttt 90
||||||| |||||||||||
Sbjct: 53 ttctagacacatccatttt 35
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 95.6 bits (48), Expect = 2e-19
Identities = 84/96 (87%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||| | |||||||||||||||| | |||||||||||||||| |||||||||||
Sbjct: 5 tactcccttcgtccggaaatacttgtccaaagaatggatgtatctagatgtattttagtt 64
Query: 74 ctagatacatccatttttatccatttgagcgacaag 109
||||||||||||||| ||| ||||| ||||||||
Sbjct: 65 atagatacatccatttctattcatttttgcgacaag 100
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| | | ||| |||||||| | |||||||||||||||||| ||||||||||
Sbjct: 111 tactccctccgttctgaattacttgtcgaaaaaatggatgtatctagacatattttagtt 52
Query: 74 ctagatacatccattttt 91
||||||||||||||||||
Sbjct: 51 ctagatacatccattttt 34
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
||||||||||| | | |||||||||||| || |||| ||||||||||| ||||| || ||
Sbjct: 121 tactccctccaactgaaaatacttgtcataggaatgtatgtatctagatgtattataatt 62
Query: 74 ctagatacatccatttttatccattt 99
|||||||||||||||||||| |||||
Sbjct: 61 ctagatacatccatttttatacattt 36
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 89.7 bits (45), Expect = 9e-18
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| | ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 111 tactccctccgttcggaattacttgtcgcgaaaatggatgtatctagacgtattttagtt 52
Query: 74 ctagatacatccatttt 90
||||||||||| |||||
Sbjct: 51 ctagatacatctatttt 35
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 89.7 bits (45), Expect = 9e-18
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| |||||||||||||||| ||| ||| |||||||||||| ||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgtcctagagatgaatgtatctagacttattttagtt 61
Query: 74 ctagatacatcca 86
||||||||||||
Sbjct: 60 atagatacatcca 48
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtc 40
|||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtc 31
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
||||||||| ||| |||||||||||| |||||||||||||||||| |||||| ||||
Sbjct: 5 tactccctctgtcccgaaatacttgtcgcggaaatggatgtatctagatgtatttcagtt 64
Query: 74 ctagatacatccattt 89
||||||||||||||||
Sbjct: 65 ctagatacatccattt 80
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ggaaatacttgtcagagaaatggatgtatctaga 61
|||| |||||||| |||||||||||||||||||
Sbjct: 97 ggaattacttgtcgtagaaatggatgtatctaga 64
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 13 ctactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagt 72
||||||||||| | | ||| |||| ||| ||||||| ||||||||||| |||||||| |
Sbjct: 122 ctactccctccgttcagaattactcgtccaagaaatgaatgtatctagatgtattttaat 63
Query: 73 tctagatacatccatttttatccattt 99
| |||||||||||||||||||||||||
Sbjct: 62 tgtagatacatccatttttatccattt 36
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 83.8 bits (42), Expect = 6e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||| ||||| || ||||||||||||| |||||||||||| |||||||||| |||||||
Sbjct: 5 tacttcctccgtctggaaatacttgtcggagaaatggatgcatctagacgtgctttagtt 64
Query: 74 ctagatacatccatttttatccattt 99
|| | |||| |||||||||||||||
Sbjct: 65 ttatacacattcatttttatccattt 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 13 ctactccctccatccggaaatacttgt 39
||||||||||| |||||||||||||||
Sbjct: 121 ctactccctccgtccggaaatacttgt 95
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 83.8 bits (42), Expect = 6e-16
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||| |||| | ||||| ||||| || ||||| |||||| ||||||||||||||||
Sbjct: 120 tactcccttcatctgaaaatatttgtcgga-aaatgaatgtatttagacgtattttagtt 62
Query: 74 ctagatacatccatttttatcc 95
||| ||||||||||||||||||
Sbjct: 61 ctacatacatccatttttatcc 40
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 17 tccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagttcta 76
||||||| | ||||| |||||||| |||||||||||||||||||| | ||| |||||||
Sbjct: 8 tccctccgttcggaattacttgtcgtagaaatggatgtatctagacatttttcagttcta 67
Query: 77 gatacatccattt 89
|||||||||||||
Sbjct: 68 gatacatccattt 80
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 81.8 bits (41), Expect = 2e-15
Identities = 98/117 (83%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||| ||| |||||||||||||||| | ||||||||||| ||||| ||||||||||
Sbjct: 5 tactccttccgtccggaaatacttgtcgaaagaatggatgtatttagacatattttagtt 64
Query: 74 ctagatacatccatttttatccatttgagcgacaagctttttgggacggagggagta 130
||||| ||||||||| ||| ||||| |||||||| ||| | ||||||||||||
Sbjct: 65 ttagatgcatccatttatattcatttttgcgacaagtatttctgaacggagggagta 121
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 81.8 bits (41), Expect = 2e-15
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 11 aactactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtatttta 70
||||||||||||| || | ||||||||||| | |||||||||||||||| | ||||||
Sbjct: 124 aactactccctccgtcagaaaatacttgtcgaaagaatggatgtatctagatgcatttta 65
Query: 71 gttctagatacatccatttttatccattt 99
|||||| |||||| ||||| |||||||||
Sbjct: 64 gttctaaatacattcatttctatccattt 36
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 79.8 bits (40), Expect = 9e-15
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 27 cggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagatacatcca 86
||||| |||||||| ||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 26 cggaattacttgtcgcagaaatggatgtatctagacgagttttagttctagatacattca 85
Query: 87 tttt 90
||||
Sbjct: 86 tttt 89
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 28 ggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagatacatccat 87
|||| |||||||| ||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 97 ggaattacttgtcgcagaaatgaatgtatctagatgtattttagttctagatacatccat 38
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctaga 61
|||||||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 5 tactccctccattcggaattacttgtctcggatatggatgtatctaga 52
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 79.8 bits (40), Expect = 9e-15
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 49 ggatgtatctagacgtattttagttctagatacatccatttttatccatttgagcgacaa 108
||||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||
Sbjct: 86 ggatgtatctagatgtattttagttctaaatacatccctttttgtccattttgatgacaa 27
Query: 109 gctttttgggacggagggagtact 132
| |||| ||||||||||||||||
Sbjct: 26 gtattttcggacggagggagtact 3
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 79.8 bits (40), Expect = 9e-15
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 13 ctactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagt 72
||||||||||| | |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 121 ctactccctccgttcggaaatacttgtcctaaaaatgaatgtatctagacttattttagt 62
Query: 73 tctagatacatc 84
| ||||||||||
Sbjct: 61 tatagatacatc 50
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 47 atggatgtatctagacgtattttagttctagatacatccattt 89
||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 37 atggatgtatctagatgtattttagttctagatacatccattt 79
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 43 agaaatggatgtatctagacgtattttagttctagatacatccatttttat 93
||||||| ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 82 agaaatgaatgtatctagatgtattttagttatagatacatccatttttat 32
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatcta 59
|||||||||| | ||||| ||||||||| | |||||||||||||||
Sbjct: 5 tactccctccgttcggaattacttgtcataaaaatggatgtatcta 50
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 47 atggatgtatctagacgtattttagttctagatacatccattt 89
||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 78 atggatgtatctagatgtattttagttctagatacatccattt 36
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 12 actactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttag 71
|||||||||||| | | ||| |||| ||| ||||||||||||||||||| |||||||||
Sbjct: 3 actactccctccgttctgaattactcgtcgcagaaatggatgtatctagatgtattttag 62
Query: 72 ttctagatacatccattt 89
|| |||||| ||||||||
Sbjct: 63 ttttagatatatccattt 80
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 75.8 bits (38), Expect = 1e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| ||||||| |||||| || | ||||||||| ||||| || ||||||||||
Sbjct: 5 tactccctccgtccggaattacttgacataaaaatggatgcatctaaacatattttagtt 64
Query: 74 ctagatacatccatttttatccattt 99
||| |||||| ||||| | |||||||
Sbjct: 65 ctaaatacattcatttatttccattt 90
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 45 aaatggatgtatctagacgtattttagttctagatacatccattt 89
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 36 aaatggatgtatctagatgtattttagttatagatacatccattt 80
>RF00906;MIR1122;AK249975.1/2279-2156 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
||||||||||||||||||||||||||| | |||| ||||||| |||| ||||||||||
Sbjct: 5 tactccctccatccggaaatacttgtcttaaaaatagatgtatgtagaattattttagtt 64
Query: 74 ctagatacatccatttt 90
|| ||||| |||||||
Sbjct: 65 ataaatacacccatttt 81
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 12 actactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttag 71
|||||||||||| || ||||||||||| | ||||||||| |||||||| ||||||||
Sbjct: 3 actactccctccgtctaaaaatacttgtcctaaaaatggatgaatctagacttattttag 62
Query: 72 ttctagatacatccatt 88
|| ||||||||||||||
Sbjct: 63 ttatagatacatccatt 79
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 47 atggatgtatctagacgtattttagttctagatacatccatttt 90
||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 78 atggatgtatcaagatgtattttagttctagatacatccatttt 35
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 49 ggatgtatctagacgtattttagttctagatacatccatttttatccatt 98
||||||||||||| |||||||||||||||||||| | ||||||||||||
Sbjct: 86 ggatgtatctagatgtattttagttctagatacaccactttttatccatt 37
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 67.9 bits (34), Expect = 3e-11
Identities = 44/46 (95%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 45 aaatggatgtatctagacgtatttt-agttctagatacatccattt 89
||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 82 aaatggatgtatctagacgcatttttagttctagatacatccattt 37
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 50 gatgtatctagacgtattttagttctagatacatccatttttatccattt 99
|||||||||||| |||||||| |||||||||||| | |||||||||||||
Sbjct: 85 gatgtatctagatgtattttaattctagatacattcttttttatccattt 36
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 ggatgtatctagacgtattttagttctagatacatc 84
|||||||||||||| |||||||||||||||||||||
Sbjct: 50 ggatgtatctagacatattttagttctagatacatc 85
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 63.9 bits (32), Expect = 5e-10
Identities = 99/120 (82%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| ||||||||||||||| | ||| || ||||||||| ||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgttctaaggatgaatatatctagacttattttagtt 61
Query: 74 ctagatacatccatttttatccatttgagcgacaagctttttgggacggagggagtactt 133
|||||||||||||| | || ||||| | |||||| ||| |||||||||||||||||
Sbjct: 60 atagatacatccattat-attcatttctgggacaagtatttccggacggagggagtactt 2
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 14 tactccctccatccggaaatacttgtcagagaaatg 49
|||||||||| |||||||||||||||| |||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcccagaaatg 40
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 43 agaaatggatgtatctagacgtattttagttctagatacatccattt 89
|||||| ||||||||||| ||||||||||||||||||||| |||||
Sbjct: 34 agaaatagatgtatctagttgtattttagttctagatacattcattt 80
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 51 atgtatctagacgtattttagttctagatacatccattt 89
|||||||||||||||||| ||| ||||||||||||||||
Sbjct: 74 atgtatctagacgtatttcagtgctagatacatccattt 36
>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 123
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
||||||| || ||||||||||| |||| |||||| |||||||||||| ||||||||||
Sbjct: 119 tactccccccgtccggaaatacctgtcttcgaaatgaatgtatctagacttattttagtt 60
Query: 74 ctagatacatc 84
|| |||||||
Sbjct: 59 atacatacatc 49
>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
Length = 124
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||| ||||| |||||||||||||||| | | ||| |||||||||||| |||| || ||
Sbjct: 120 tactacctccgtccggaaatacttgtcctacagatgaatgtatctagacttattctaatt 61
Query: 74 ctagatacatccatt 88
||||||||||||||
Sbjct: 60 gtagatacatccatt 46
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 49 ggatgtatctagacgtattttagttctagatacat 83
||||||||||||| |||||||||||||||||||||
Sbjct: 86 ggatgtatctagatgtattttagttctagatacat 52
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtca 41
|||||||||| |||||||||||||||||
Sbjct: 132 tactccctccgtccggaaatacttgtca 105
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 51 atgtatctagacgtattttagttctagatacatccattttta 92
||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 79 atgtatctagatgtattttagttctagatacatttattttta 38
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 15 actccctccatccggaaatacttgtcagagaaatg 49
||||||||| | |||||||||||||| ||||||||
Sbjct: 1 actccctccgttcggaaatacttgtcggagaaatg 35
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 50 gatgtatctagacgtattttagttctagatacatccatttttatccattt 99
|||||||||||| |||| |||||| |||||| |||| |||||||||||||
Sbjct: 51 gatgtatctagatgtatattagttttagatatatccttttttatccattt 100
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 60.0 bits (30), Expect = 8e-09
Identities = 97/118 (82%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
|||||||||| || | ||||||||| | |||||||| ||||| ||||| ||||||||||
Sbjct: 120 tactccctccgtctgaaaatacttgccctagaaatggttgtatgtagacttattttagtt 61
Query: 74 ctagatacatccatttttatccatttgagcgacaagctttttgggacggagggagtac 131
|||||||||| ||||| || ||||| |||||| ||| |||||||||||||||
Sbjct: 60 atagatacatcaatttt-attcatttctaggacaagtatttgcggacggagggagtac 4
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 60.0 bits (30), Expect = 8e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 49 ggatgtatctagacgtattttagttctagatacatccatttttatccatttgagcgacaa 108
|||||||| || || ||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 50 ggatgtatttaaacatattttagttctaaatacatttatttttatccattttgatgacaa 109
Query: 109 gctttttgggacggagggagta 130
| |||| ||||||||||||||
Sbjct: 110 gtattttcggacggagggagta 131
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 51 atgtatctagacgtattttagttctagatacatccatttttatccattt 99
|||||| |||| ||||||||||||||| |||||| |||||||||||||
Sbjct: 84 atgtatatagatgtattttagttctaggtacatcattttttatccattt 36
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 51 atgtatctagacgtattttagttctagatacatccatttttatccattt 99
||||||||||| |||||||||||||| |||||| |||||||||||||
Sbjct: 84 atgtatctagatatattttagttctaggtacatctctttttatccattt 36
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 50 gatgtatctagacgtattttagttctagatacatccatttt 90
||||||||||||| ||||||| || ||||||||||||||||
Sbjct: 41 gatgtatctagacttattttacttatagatacatccatttt 81
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtca 41
|||||||||| |||||||||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgtca 93
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 49 ggatgtatctagacgtattttagttctagatacatc 84
||||||||||||| |||||||||||||| |||||||
Sbjct: 61 ggatgtatctagatgtattttagttctacatacatc 96
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 54.0 bits (27), Expect = 5e-07
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 49 ggatgtatctagacgtattttagttctagatacatccatttttatccatttgagcgacaa 108
|||||||| |||| |||||||||||||||||| ||| ||||| | ||||| |||||
Sbjct: 49 ggatgtatttagatgtattttagttctagatatatctctttttgttcattttgatgacaa 108
Query: 109 gctttttgggacggagggagtac 131
| |||| |||||||||||||||
Sbjct: 109 gtattttcggacggagggagtac 131
>RF00906;MIR1122;EF104384.1/242-122 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 121
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 92 atccatttgagcgacaagctttttgggacggagggagta 130
||||||| ||| |||||||||||| ||||||||||||||
Sbjct: 39 atccattggagggacaagctttttcggacggagggagta 1
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 54.0 bits (27), Expect = 5e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
||||||| || |||||||||||||||| | | ||| ||||||||| | ||||||||||
Sbjct: 120 tactccccccgtccggaaatacttgtcctaaagatgaatgtatctaaatttattttagtt 61
Query: 74 ctagatacatccatt 88
| ||||||||||||
Sbjct: 60 atggatacatccatt 46
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 54.0 bits (27), Expect = 5e-07
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 51 atgtatctagacgtattttagt-tctagatacatccattttta 92
|||||||||||||||||||||| | ||||||| ||||||||||
Sbjct: 42 atgtatctagacgtattttagtatatagatacgtccattttta 84
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 45 aaatggatgtatctagacgtattttagttctagatacatccattt 89
|||| ||| |||||||| |||||||||||||| |||| |||||||
Sbjct: 80 aaatagatatatctagatgtattttagttctaaatacgtccattt 36
>RF00906;MIR1122;EU282716.1/1526-1412 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 115
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 49 ggatgtatctagacgtattttagttctagatacatcc 85
|||||||||||||||||||| ||| ||| ||||||||
Sbjct: 40 ggatgtatctagacgtatttcagtgctaaatacatcc 76
>RF00906;MIR1122;AY663392.1/105130-105016 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 13 ctactccctccatccggaaatacttgtcagagaaatggatgtatctagacgtattttagt 72
||||||||| ||| | ||||||||||| | |||||| ||||||||||| | ||||| |
Sbjct: 4 ctactcccttcattcagaaatacttgttctacaaatggttgtatctagacttgttttaat 63
Query: 73 tctagata 80
||||||||
Sbjct: 64 tctagata 71
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 141
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 30 aaatacttgtcagagaaatggatgtatctagacgtattttagtt 73
||||||||||| |||||| |||||||||||| ||||||||||
Sbjct: 21 aaatacttgtcctagaaatagatgtatctagatttattttagtt 64
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 tactccctccatccggaaatacttgt 39
|||||||||| |||||||||||||||
Sbjct: 137 tactccctccgtccggaaatacttgt 112
>RF00906;MIR1122;EU862571.1/695-592 98113:Hordeum murinum subsp.
glaucum
Length = 104
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 105 acaagctttttgggacggagggagtact 132
||||| ||||||||||||||||||||||
Sbjct: 75 acaagttttttgggacggagggagtact 102
>RF00906;MIR1122;EU862588.1/607-710 4516:Hordeum bulbosum
Length = 104
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 105 acaagctttttgggacggagggagtact 132
||||||||||||||||| ||||||||||
Sbjct: 30 acaagctttttgggacgaagggagtact 3
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 gacaagctttttgggacggagg 125
||||||||||||||||||||||
Sbjct: 74 gacaagctttttgggacggagg 95
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 51 atgtatctagacgtattttagttctagatacatccattt 89
||||||||||| ||||||| |||||||||||| |||||
Sbjct: 74 atgtatctagatttattttaattctagatacattcattt 36
>RF00906;MIR1122;AF254799.1/60623-60744 4513:Hordeum vulgare
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 56 tctagacgtattttagttctagatacatccatttt 90
||||||| |||||||||||| ||||||||||||||
Sbjct: 68 tctagacatattttagttct-gatacatccatttt 35
>RF00906;MIR1122;AF446141.1/45135-45243 37682:Aegilops tauschii
Length = 109
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 92 atccatttgagcgacaagctttttgggacggagggagta 130
||||||||||| | ||| ||||| |||||||||||||||
Sbjct: 43 atccatttgagggtcaaacttttagggacggagggagta 5
>RF00906;MIR1122;AAAA02014698.1/33454-33543 39946:Oryza sativa
Indica Group
Length = 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 111 tttttgggacggagggagtactt 133
|||||||||||||||||||||||
Sbjct: 24 tttttgggacggagggagtactt 2
>RF00906;MIR1122;AP006171.2/9738-9583 39947:Oryza sativa Japonica
Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 110 ctttttgggacggagggagtact 132
|||||||||||||||||||||||
Sbjct: 25 ctttttgggacggagggagtact 3
>RF00906;MIR1122;AACV01010622.1/23023-23178 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 111 tttttgggacggagggagtactt 133
|||||||||||||||||||||||
Sbjct: 24 tttttgggacggagggagtactt 2
>RF00906;MIR1122;CR855173.1/25497-25408 4530:Oryza sativa (rice)
Length = 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 111 tttttgggacggagggagtactt 133
|||||||||||||||||||||||
Sbjct: 24 tttttgggacggagggagtactt 2
>RF00906;MIR1122;CT832702.1/1285-1384 39946:Oryza sativa Indica
Group
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 112 ttttgggacggagggagtactta 134
|||||||||||||||||||||||
Sbjct: 78 ttttgggacggagggagtactta 100
>RF00906;MIR1122;AAAA02015207.1/7418-7517 39946:Oryza sativa Indica
Group
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 112 ttttgggacggagggagtactta 134
|||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtactta 1
>RF00906;MIR1122;AC025783.10/100980-101130 39947:Oryza sativa
Japonica Group
Length = 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 111 tttttgggacggagggagtactt 133
|||||||||||||||||||||||
Sbjct: 128 tttttgggacggagggagtactt 150
>RF00906;MIR1122;AACV01017892.1/4248-4093 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 111 tttttgggacggagggagtactt 133
|||||||||||||||||||||||
Sbjct: 133 tttttgggacggagggagtactt 155
>RF00906;MIR1122;AP004994.2/80471-80627 39947:Oryza sativa Japonica
Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 112 ttttgggacggagggagtactta 134
|||||||||||||||||||||||
Sbjct: 135 ttttgggacggagggagtactta 157
>RF00906;MIR1122;AACV01015141.1/40750-40841 39947:Oryza sativa
Japonica Group
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 110 ctttttgggacggagggagtact 132
|||||||||||||||||||||||
Sbjct: 25 ctttttgggacggagggagtact 3
>RF01058;MIR806;ABXC01000117.1/227422-227180 4558:Sorghum bicolor
(sorghum)
Length = 243
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 110 ctttttgggacggagggagtac 131
||||||||||||||||||||||
Sbjct: 22 ctttttgggacggagggagtac 1
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 110 ctttttgggacggagggagtac 131
||||||||||||||||||||||
Sbjct: 222 ctttttgggacggagggagtac 243
>RF00906;MIR1122;ABXC01002132.1/397783-397672 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 110 ctttttgggacggagggagtac 131
||||||||||||||||||||||
Sbjct: 88 ctttttgggacggagggagtac 109
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 tttgggacggagggagtactta 134
||||||||||||||||||||||
Sbjct: 73 tttgggacggagggagtactta 94
>RF00906;MIR1122;EF059989.1/74343-74464 29664:Brachypodium
sylvaticum
Length = 122
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 51 atgtatctagacgtattttagttctagatacatccattttta 92
|||||||||||||| ||||| | ||||||||||||| ||||
Sbjct: 81 atgtatctagacgttttttaactatagatacatccatgttta 40
>RF00906;MIR1122;AAAA02002553.1/2264-2375 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 ttttgggacggagggagtactt 133
||||||||||||||||||||||
Sbjct: 90 ttttgggacggagggagtactt 111
>RF00906;MIR1122;AAAA02003310.1/4753-4639 39946:Oryza sativa Indica
Group
Length = 115
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 tttttgggacggagggagtact 132
||||||||||||||||||||||
Sbjct: 24 tttttgggacggagggagtact 3
>RF00906;MIR1122;AP008217.1/1240656-1240769 39947:Oryza sativa
Japonica Group
Length = 114
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 111 tttttgggacggagggagtact 132
||||||||||||||||||||||
Sbjct: 91 tttttgggacggagggagtact 112
>RF00906;MIR1122;AAAA02033081.1/3802-3711 39946:Oryza sativa Indica
Group
Length = 92
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 112 ttttgggacggagggagtactt 133
||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtactt 2
>RF00906;MIR1122;CR855084.1/66223-66112 4530:Oryza sativa (rice)
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 tttttgggacggagggagtact 132
||||||||||||||||||||||
Sbjct: 24 tttttgggacggagggagtact 3
>RF00906;MIR1122;AAAA02030644.1/62271-62160 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 tttttgggacggagggagtact 132
||||||||||||||||||||||
Sbjct: 24 tttttgggacggagggagtact 3
>RF00906;MIR1122;AP008210.1/17746245-17746133 39947:Oryza sativa
Japonica Group
Length = 113
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 tttttgggacggagggagtact 132
||||||||||||||||||||||
Sbjct: 24 tttttgggacggagggagtact 3
>RF00906;MIR1122;AACV01025370.1/11561-11672 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 tttttgggacggagggagtact 132
||||||||||||||||||||||
Sbjct: 24 tttttgggacggagggagtact 3
>RF00906;MIR1122;AACV01013045.1/9312-9408 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 111 tttttgggacggagggagtact 132
||||||||||||||||||||||
Sbjct: 74 tttttgggacggagggagtact 95
>RF00906;MIR1122;AACV01024204.1/3332-3459 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 tttttgggacggagggagtact 132
||||||||||||||||||||||
Sbjct: 24 tttttgggacggagggagtact 3
>RF00906;MIR1122;AL772423.4/33732-33621 4530:Oryza sativa (rice)
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 tttttgggacggagggagtact 132
||||||||||||||||||||||
Sbjct: 24 tttttgggacggagggagtact 3
>RF00906;MIR1122;AACV01018362.1/12376-12241 39947:Oryza sativa
Japonica Group
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 110 ctttttgggacggagggagtac 131
||||||||||||||||||||||
Sbjct: 25 ctttttgggacggagggagtac 4
>RF00906;MIR1122;AAAA02010499.1/21534-21382 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 112 ttttgggacggagggagtactt 133
||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtactt 2
>RF00906;MIR1122;AC123519.2/136575-136462 39947:Oryza sativa
Japonica Group
Length = 114
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 tttttgggacggagggagtact 132
||||||||||||||||||||||
Sbjct: 24 tttttgggacggagggagtact 3
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 112 ttttgggacggagggagtactt 133
||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtactt 2
