miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 145 bits (73), Expect = 2e-34
Identities = 106/117 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtcccaaaaagcttgtcgctcaaatggataaaaatggatgtatctagaac 81
||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||
Sbjct: 121 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 62
Query: 82 taaaatacgtctagatacatccatttctctgacaagtatttccggatggagggagta 138
|||||||| |||||||||||||||| | | |||||||||||||||| ||||||||||
Sbjct: 61 taaaatacatctagatacatccattcccccgacaagtatttccggacggagggagta 5
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 145 bits (73), Expect = 2e-34
Identities = 106/117 (90%)
Strand = Plus / Plus
Query: 22 tactccctccgtcccaaaaagcttgtcgctcaaatggataaaaatggatgtatctagaac 81
||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 64
Query: 82 taaaatacgtctagatacatccatttctctgacaagtatttccggatggagggagta 138
|||||||| |||||||||||||||| | | |||||||||||||||| ||||||||||
Sbjct: 65 taaaatacatctagatacatccattcccccgacaagtatttccggacggagggagta 121
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 137 bits (69), Expect = 5e-32
Identities = 105/117 (89%)
Strand = Plus / Plus
Query: 22 tactccctccgtcccaaaaagcttgtcgctcaaatggataaaaatggatgtatctagaac 81
|||||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtcctgaaatacttgtcggagaaatgcataaaaatggatgtatctagaac 64
Query: 82 taaaatacgtctagatacatccatttctctgacaagtatttccggatggagggagta 138
|||||||||||||| |||||||||| |||||||||||||||||||| |||||||||
Sbjct: 65 taaaatacgtctaggtacatccattcctctgacaagtatttccggacagagggagta 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 103 catttctctgacaagtatttccggatggagggagta 138
|||||||| |||||||||||| ||| ||||||||||
Sbjct: 40 catttctccgacaagtatttcaggacggagggagta 5
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 131 bits (66), Expect = 3e-30
Identities = 90/98 (91%)
Strand = Plus / Minus
Query: 43 cttgtcgctcaaatggataaaaatggatgtatctagaactaaaatacgtctagatacatc 102
|||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 100 cttgtcgcataaattgataaaaatggatgtatctagaactaaaatacatctagatacatc 41
Query: 103 catttctctgacaagtatttccggatggagggagtagt 140
|||| || ||||||||||||||||| || |||||||||
Sbjct: 40 cattcctatgacaagtatttccggacggcgggagtagt 3
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 131 bits (66), Expect = 3e-30
Identities = 81/86 (94%)
Strand = Plus / Minus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatccatttctctg 112
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 90 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatccatttctccg 31
Query: 113 acaagtatttccggatggagggagta 138
|||| || || |||| ||||||||||
Sbjct: 30 acaaataatttcggacggagggagta 5
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 129 bits (65), Expect = 1e-29
Identities = 71/73 (97%)
Strand = Plus / Minus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatccatttctctg 112
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 90 aaatggataaaaatggatgtatctagaagtaaaatacgtctagatacatccatttctctg 31
Query: 113 acaagtatttccg 125
|||||||| ||||
Sbjct: 30 acaagtatatccg 18
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 127 bits (64), Expect = 5e-29
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 43 cttgtcgctcaaatggataaaaatggatgtatctagaactaaaatacgtctagatacatc 102
|||||||| |||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 26 cttgtcgcataaatggataaaaatggatgtatctagaattaaaatacatctagatagatt 85
Query: 103 catttctctgacaagtatttccggatggagggagta 138
|||||||| |||||||||||||||| ||||||||||
Sbjct: 86 catttctccgacaagtatttccggacggagggagta 121
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 123 bits (62), Expect = 8e-28
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatccatttctctg 112
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 36 aaatggaaagaaatggatgtatctagaactaaaatacgtctagatacatccatttctatg 95
Query: 113 acaagtatttccggatggagggagta 138
|||| || ||||||| ||||||||||
Sbjct: 96 acaaataattccggacggagggagta 121
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 121 bits (61), Expect = 3e-27
Identities = 103/117 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtcccaaaaagcttgtcgctcaaatggataaaaatggatgtatctagaac 81
|||||||||||||| || |||||| | ||||||||||||||||||| ||||||||||
Sbjct: 121 tactccctccgtccggaattacttgtcacacaaatggataaaaatggatatatctagaac 62
Query: 82 taaaatacgtctagatacatccatttctctgacaagtatttccggatggagggagta 138
|||||||| |||||||||||||||| || |||||| |||||||||| |||||||||
Sbjct: 61 taaaatacatctagatacatccattcctatgacaaatatttccggacagagggagta 5
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 119 bits (60), Expect = 1e-26
Identities = 106/120 (88%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaagcttgtcgctcaaatggataaaaatggatgtatctaga 79
|||||||||||||||| ||| |||||||| ||||||||| |||||||||||||||||
Sbjct: 3 agtactccctccgtccggaaatacttgtcgcagaaatggatataaatggatgtatctaga 62
Query: 80 actaaaatacgtc-tagatacatccatttctctgacaagtatttccggatggagggagta 138
|||||||||| || | |||||||||||| ||| ||||||||||| |||| ||||||||||
Sbjct: 63 actaaaatacatctttgatacatccattcctcggacaagtattttcggacggagggagta 122
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 100 atccatttctctgacaagtatttccggatggagggagta 138
|||||||||| |||||||||||||||| ||||||||||
Sbjct: 43 atccatttctgcgacaagtatttccggacggagggagta 5
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 115 bits (58), Expect = 2e-25
Identities = 79/86 (91%)
Strand = Plus / Minus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatccatttctctg 112
|||||||| |||||| |||||| ||||||||||||||||||||||||||| ||||||| |
Sbjct: 90 aaatggattaaaatgaatgtatttagaactaaaatacgtctagatacatcaatttctcag 31
Query: 113 acaagtatttccggatggagggagta 138
|||||||||| |||| ||||||||||
Sbjct: 30 acaagtattttcggacggagggagta 5
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 113 bits (57), Expect = 7e-25
Identities = 82/89 (92%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 53 aaatggataaaaatggatgtatctagaactaaaa-tacgtctagatacatccatttctct 111
|||||| |||||||| |||||||||||||||||| ||||| |||||||||| |||||||
Sbjct: 35 aaatgggtaaaaatgaatgtatctagaactaaaaatacgtttagatacatctatttctcc 94
Query: 112 gacaagtatttccggatggagggagtagt 140
|||| ||||||||||||||||||||||||
Sbjct: 95 gacaggtatttccggatggagggagtagt 123
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 105 bits (53), Expect = 2e-22
Identities = 104/121 (85%)
Strand = Plus / Minus
Query: 20 agtactccctccgtcccaaaaagcttgtcgctcaaatggataaaaatggatgtatctaga 79
||||||||||| |||| |||| |||||| ||||||||||||||| |||||||||||
Sbjct: 123 agtactccctctgtccgaaaatacttgtcatcaaaatggataaaaatgaatgtatctaga 64
Query: 80 actaaaatacgtctagatacatccatttctctgacaagtatttccggatggagggagtag 139
|||||||||| |||||||||| |||| || |||||||||||| |||| ||||||||||
Sbjct: 63 actaaaatacatctagatacacccatctcaatgacaagtattttcggacagagggagtag 4
Query: 140 t 140
|
Sbjct: 3 t 3
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 62 aaaatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtatt 121
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 35 aaaatggatctatctagaactaaaatacgtctagatacatccatttctgagacaagtaat 94
Query: 122 tccggatggagggagta 138
|||| | ||||||||||
Sbjct: 95 tccgaacggagggagta 111
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 103 bits (52), Expect = 7e-22
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 43 cttgtcgctcaaatggataaaaatggatgtatctagaactaaaatacgtctagatacatc 102
|||||||| ||||| ||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 26 cttgtcgcacaaatatataaaaatgaatgtatctagaactaaaatatatctagatacata 85
Query: 103 catttctctgacaagtatttccggatggagggagta 138
|||| || || ||||||||| |||||||||||||||
Sbjct: 86 cattcctatgccaagtattttcggatggagggagta 121
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 62 aaaatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtatt 121
||||||||||| |||||||||||||||| |||||||| ||||||||| |||||||||||
Sbjct: 35 aaaatggatgtgtctagaactaaaatacatctagatatatccatttcaatgacaagtatt 94
Query: 122 tccggatggagggagtagt 140
| |||| ||||||||||||
Sbjct: 95 ttcggacggagggagtagt 113
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 95.6 bits (48), Expect = 2e-19
Identities = 84/96 (87%)
Strand = Plus / Minus
Query: 43 cttgtcgctcaaatggataaaaatggatgtatctagaactaaaatacgtctagatacatc 102
|||||||| ||||| ||| ||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 100 cttgtcgcaaaaatgaatagaaatggatgtatctataactaaaatacatctagatacatc 41
Query: 103 catttctctgacaagtatttccggatggagggagta 138
|||| | |||||||||||||||| | ||||||||
Sbjct: 40 cattctttggacaagtatttccggacgaagggagta 5
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 61 aaaaatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtat 120
|||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||
Sbjct: 34 aaaaatggatgtatctagaactaaaatatgtctagatacatccattttttcgacaagtaa 93
Query: 121 ttccggatggagggagta 138
||| | | ||||||||||
Sbjct: 94 ttcagaacggagggagta 111
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatccatttctctg 112
||||| |||||||||||||||||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 36 aaatgtataaaaatggatgtatctagaattataatacatctagatacatacattcctatg 95
Query: 113 acaagtatttccggatggagggagta 138
|||||||||| | | |||||||||||
Sbjct: 96 acaagtattttcagttggagggagta 121
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 62 aaaatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtatt 121
||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 35 aaaatagatgtatctagaactaaaatacgtctagatacatccattttcgcgacaagtaat 94
Query: 122 tccggatggagggagta 138
|||| | ||||||||||
Sbjct: 95 tccgaacggagggagta 111
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 66 tggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtatttccg 125
|||||||||||| |||||||||| |||||||||||| ||| ||| ||||||||||||||
Sbjct: 48 tggatgtatctataactaaaataagtctagatacattcatctctaggacaagtatttccg 107
Query: 126 gatggagggagta 138
|| ||||||||||
Sbjct: 108 gacggagggagta 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 112 gacaagtatttccggatggagggagta 138
|||||||||||||||| ||||||||||
Sbjct: 31 gacaagtatttccggacggagggagta 5
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 63 aaatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtattt 122
|||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||
Sbjct: 80 aaatggatgtatctagaactgaaatacatctagatacatccatttccgcgacaagtattt 21
Query: 123 ccggatggagggagta 138
| ||| |||||||||
Sbjct: 20 cgggacagagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 91 tctagatacatccatttctctgacaagtatttcc 124
||||||||||||||||||| |||||||| ||||
Sbjct: 64 tctagatacatccatttctacgacaagtaattcc 97
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatccatttctctg 112
||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||| |
Sbjct: 36 aaatggataaaaatggatgtatctacaattaaaatacatctagatacattcatttcttgg 95
Query: 113 acaagtatttccggatggagggagtag 139
|| |||| ||| | | |||||||||||
Sbjct: 96 acgagtaattctgaacggagggagtag 122
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 83.8 bits (42), Expect = 7e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatccatttctctg 112
||||||||||||||| |||| | || ||||||| |||||||||| |||||||||||| |
Sbjct: 90 aaatggataaaaatgaatgtgtataaaactaaagcacgtctagatgcatccatttctccg 31
Query: 113 acaagtatttccggatggagggagta 138
|||||||||||| || ||||| ||||
Sbjct: 30 acaagtatttccagacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 acaagtatttccggatggagggagtag 139
||||||||||||||| |||||||||||
Sbjct: 95 acaagtatttccggacggagggagtag 121
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 83.8 bits (42), Expect = 7e-16
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 57 ggataaaaatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaa 116
|||||||||||||||||| ||||||||||||||||||| |||||| ||||| || |||||
Sbjct: 40 ggataaaaatggatgtatgtagaactaaaatacgtctaaatacattcattt-tccgacaa 98
Query: 117 gtatttccggatggagggagta 138
||||| | |||| ||||||||
Sbjct: 99 atattttcagatgaagggagta 120
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 63 aaatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtattt 122
|||||||||||||||||||| ||| | |||||||||||||||||||| |||||||| ||
Sbjct: 80 aaatggatgtatctagaactgaaaaatgtctagatacatccatttctacgacaagtaatt 21
Query: 123 ccggatggaggga 135
||| | |||||||
Sbjct: 20 ccgaacggaggga 8
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 81.8 bits (41), Expect = 3e-15
Identities = 98/117 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtcccaaaaagcttgtcgctcaaatggataaaaatggatgtatctagaac 81
|||||||||||| | ||| |||||||| ||||| ||| ||||||||| ||||| |||
Sbjct: 121 tactccctccgttcagaaatacttgtcgcaaaaatgaatataaatggatgcatctaaaac 62
Query: 82 taaaatacgtctagatacatccatttctctgacaagtatttccggatggagggagta 138
||||||| ||||| ||||||||||| | |||||||||||||||| ||| ||||||
Sbjct: 61 taaaatatgtctaaatacatccattctttcgacaagtatttccggacggaaggagta 5
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 81.8 bits (41), Expect = 3e-15
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatccatttctctg 112
||||||||| ||||| |||||| |||||||||||| | |||||||||||||||| | |
Sbjct: 36 aaatggatagaaatgaatgtatttagaactaaaatgcatctagatacatccattctttcg 95
Query: 113 acaagtatttccggatggagggagtagtt 141
|||||||||| | || |||||||||||||
Sbjct: 96 acaagtattttctgacggagggagtagtt 124
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 62 aaaatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtatt 121
|||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| |
Sbjct: 89 aaaatgaatgtatctagaactaaaactcgtctagatacatccatttctgcgacaagtaat 30
Query: 122 tccg 125
||||
Sbjct: 29 tccg 26
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 65 atggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtatttcc 124
||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| ||||
Sbjct: 38 atggatgtatctagaactaaaatacatctagatacattcatttctgcgacaagtaattcc 97
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 91 tctagatacatccatttctctgacaagtatttccggatggagggagta 138
||||||||||||||| || |||||||| ||||| ||||||||||||
Sbjct: 52 tctagatacatccatatccgagacaagtaattccgaatggagggagta 5
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaagcttgtcgctcaaatggataaaaatggatgtatctaga 79
|||||||||||||||| |||| |||||| ||||||| ||||| |||||||| ||||
Sbjct: 3 agtactccctccgtccgaaaatacttgtcatcaaaatggacaaaaagggatgtatttaga 62
Query: 80 actaaaatacgtctagatacatcc 103
|||||||||| |||||||||||||
Sbjct: 63 actaaaatacatctagatacatcc 86
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 68 gatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtatttccgga 127
|||||||||| |||||||||| |||||||||||| ||||| | |||||||||||||| |
Sbjct: 50 gatgtatctataactaaaataagtctagatacattcatttttaggacaagtatttccgaa 109
Query: 128 tggagggagtag 139
|||||||||||
Sbjct: 110 cggagggagtag 121
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 63 aaatggatgtatctagaactaaaatacgtctagatacatccat 105
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 79 aaatggatgtatctagaactaaaatacatctagatacatccat 37
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 59 ataaaaatggatgtatctagaactaaaatacgtctagatacatccatttct 109
||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 32 ataaaaatggatgtatctataactaaaatacatctagatacattcatttct 82
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 93 tagatacatccatttctctgacaagtatttccggatggagggagta 138
||||||||||||||| | ||||||||| ||||| | ||||||||||
Sbjct: 50 tagatacatccatttttatgacaagtaattccgaacggagggagta 5
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 63 aaatggatgtatctagaactaaaatacgtctagatacatccat 105
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 36 aaatggatgtatctagaactaaaatacatctagatacatccat 78
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 63 aaatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtattt 122
|||||||| |||||| ||||||||||| ||||||||||||||||||| ||| |||| ||
Sbjct: 80 aaatggatatatctaaaactaaaatacatctagatacatccatttctgcgacgagtaatt 21
Query: 123 ccggatggagggagtagt 140
| | | ||||||||||||
Sbjct: 20 cagaacggagggagtagt 3
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatccatttctctg 112
||||||| | ||||| |||||| ||||||||||||| || ||||| ||||||||| | ||
Sbjct: 90 aaatggaaataaatgaatgtatttagaactaaaatatgtttagatgcatccatttttatg 31
Query: 113 acaagtatttccggatggagggagta 138
|||||| ||||||| ||||||||||
Sbjct: 30 tcaagtaattccggacggagggagta 5
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 63 aaatggatgtatctagaactaaaatacgtctagatacatccattt 107
||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 80 aaatggatgtatctataactaaaatacatctagatacatccattt 36
>RF00906;MIR1122;AK249975.1/2279-2156 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 62 aaaatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtatt 121
||||||| ||||| || |||||||||| |||| ||||||| |||| | ||||||||||
Sbjct: 81 aaaatgggtgtatttataactaaaataattctacatacatctatttttaagacaagtatt 22
Query: 122 tccggatggagggagta 138
|||||||||||||||||
Sbjct: 21 tccggatggagggagta 5
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 64 aatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtatttc 123
|||||||||||||| |||||||||| |||||||| ||||||||| | |||||||||||
Sbjct: 79 aatggatgtatctataactaaaataagtctagattcatccatttttaggacaagtatttt 20
Query: 124 cggatggagggagtagt 140
|| ||||||||||||
Sbjct: 19 tagacggagggagtagt 3
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 62 aaaatggatgtatctagaactaaaatacgtctagatacatccat 105
|||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 35 aaaatggatgtatctagaactaaaatacatcttgatacatccat 78
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 54 aatggataaaaatggatgtatctagaactaaaatacgtctagatacatcc 103
|||||||||||| | |||||||||||||||||||| |||||||||||||
Sbjct: 37 aatggataaaaagtggtgtatctagaactaaaatacatctagatacatcc 86
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 67.9 bits (34), Expect = 4e-11
Identities = 44/46 (95%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 63 aaatggatgtatctagaact-aaaatacgtctagatacatccattt 107
|||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 37 aaatggatgtatctagaactaaaaatgcgtctagatacatccattt 82
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatc 102
||||||||||||| | |||||||||||| |||||||| ||||||||||||
Sbjct: 36 aaatggataaaaaagaatgtatctagaattaaaatacatctagatacatc 85
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 68 gatgtatctagaactaaaatacgtctagatacatcc 103
||||||||||||||||||||| ||||||||||||||
Sbjct: 85 gatgtatctagaactaaaatatgtctagatacatcc 50
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 63.9 bits (32), Expect = 6e-10
Identities = 99/120 (82%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 19 aagtactccctccgtcccaaaaagcttgtcgctcaaatggataaaaatggatgtatctag 78
||||||||||||||||| ||| |||||| | ||||| || | ||||||||||||||
Sbjct: 2 aagtactccctccgtccggaaatacttgtcccagaaatgaat-ataatggatgtatctat 60
Query: 79 aactaaaatacgtctagatacatccatttctctgacaagtatttccggatggagggagta 138
|||||||||| ||||||||| || ||| | ||||||||||||||| ||||||||||
Sbjct: 61 aactaaaataagtctagatatattcatccttagaacaagtatttccggacggagggagta 120
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 103 catttctctgacaagtatttccggatggagggagta 138
||||||| |||||||||||||||| ||||||||||
Sbjct: 40 catttctgggacaagtatttccggacggagggagta 5
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 63 aaatggatgtatctagaactaaaatacgtctagatacatccatttct 109
||||| ||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 80 aaatgaatgtatctagaactaaaatacaactagatacatctatttct 34
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 63 aaatggatgtatctagaactaaaatacgtctagatacat 101
|||||||||||||||| ||| ||||||||||||||||||
Sbjct: 36 aaatggatgtatctagcactgaaatacgtctagatacat 74
>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 123
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 68 gatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtatttccgga 127
||||||| || |||||||||| |||||||||||| |||||| |||| |||||||||||
Sbjct: 49 gatgtatgtataactaaaataagtctagatacattcatttcgaagacaggtatttccgga 108
Query: 128 tggagggagta 138
|| |||||||
Sbjct: 109 cggggggagta 119
>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
Length = 124
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 64 aatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtatttc 123
|||||||||||||| || || |||| |||||||||||| ||| | | ||||||||||||
Sbjct: 46 aatggatgtatctacaattagaataagtctagatacattcatctgtaggacaagtatttc 105
Query: 124 cggatggagggagta 138
|||| ||||| ||||
Sbjct: 106 cggacggaggtagta 120
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 69 atgtatctagaactaaaatacgtctagatacatcc 103
||||||||||||||||||||| |||||||||||||
Sbjct: 52 atgtatctagaactaaaatacatctagatacatcc 86
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 111 tgacaagtatttccggatggagggagta 138
||||||||||||||||| ||||||||||
Sbjct: 105 tgacaagtatttccggacggagggagta 132
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 60 taaaaatggatgtatctagaactaaaatacgtctagatacat 101
||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 38 taaaaataaatgtatctagaactaaaatacatctagatacat 79
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 103 catttctctgacaagtatttccggatggagggagt 137
|||||||| |||||||||||||| | |||||||||
Sbjct: 35 catttctccgacaagtatttccgaacggagggagt 1
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatc 102
||||||||||||| |||| |||||| |||||| |||| ||||||||||||
Sbjct: 100 aaatggataaaaaaggatatatctaaaactaatatacatctagatacatc 51
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 60.0 bits (30), Expect = 1e-08
Identities = 97/118 (82%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 21 gtactccctccgtcccaaaaagcttgtcgctcaaatggataaaaatggatgtatctagaa 80
||||||||||||||| ||| |||||| ||||| || ||||| |||||||||| ||
Sbjct: 4 gtactccctccgtccgcaaatacttgtcctagaaatgaat-aaaattgatgtatctataa 62
Query: 81 ctaaaatacgtctagatacatccatttctctgacaagtatttccggatggagggagta 138
|||||||| ||||| ||||| |||||||| | ||||||||| | || ||||||||||
Sbjct: 63 ctaaaataagtctacatacaaccatttctagggcaagtattttcagacggagggagta 120
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtcccaaaaagcttgtcgctcaaatggataaaaatggatgtatctagaac 81
|||||||||||||| |||| |||||| |||||||||||||| |||||| ||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaaatggataaaaataaatgtatttagaac 72
Query: 82 taaaatacgtctagatacatcc 103
||||||| || || ||||||||
Sbjct: 71 taaaatatgtttaaatacatcc 50
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacat 101
||||||||||||| |||||| ||||||||||||||| |||| ||||||
Sbjct: 36 aaatggataaaaaatgatgtacctagaactaaaatacatctatatacat 84
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 53 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacat 101
||||||||||||| |||||| |||||||||||||| |||||||||||
Sbjct: 36 aaatggataaaaagagatgtacctagaactaaaatatatctagatacat 84
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 62 aaaatggatgtatctagaactaaaatacgtctagatacatc 102
|||||||||||||||| || ||||||| |||||||||||||
Sbjct: 81 aaaatggatgtatctataagtaaaataagtctagatacatc 41
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 111 tgacaagtatttccggatggagggagta 138
||||||||||||||||| ||||||||||
Sbjct: 93 tgacaagtatttccggacggagggagta 120
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 68 gatgtatctagaactaaaatacgtctagatacatcc 103
||||||| |||||||||||||| |||||||||||||
Sbjct: 96 gatgtatgtagaactaaaatacatctagatacatcc 61
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 54.0 bits (27), Expect = 6e-07
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 21 gtactccctccgtcccaaaaagcttgtcgctcaaatggataaaaatggatgtatctagaa 80
||||||||||||||| |||| |||||| ||||| | ||||| ||| |||||||||
Sbjct: 131 gtactccctccgtccgaaaatacttgtcatcaaaatgaacaaaaagagatatatctagaa 72
Query: 81 ctaaaatacgtctagatacatcc 103
||||||||| |||| ||||||||
Sbjct: 71 ctaaaatacatctaaatacatcc 49
>RF00906;MIR1122;EF104384.1/242-122 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 121
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 22 tactccctccgtcccaaaaagcttgtcgctcaaatggat 60
|||||||||||||| |||||||||||| ||| |||||||
Sbjct: 1 tactccctccgtccgaaaaagcttgtccctccaatggat 39
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 54.0 bits (27), Expect = 6e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 64 aatggatgtatctagaactaaaatacgtctagatacatccatttctctgacaagtatttc 123
|||||||||||| | |||||||||| | ||||||||| ||| | | ||||||||||||
Sbjct: 46 aatggatgtatccataactaaaataaatttagatacattcatctttaggacaagtatttc 105
Query: 124 cggatggagggagta 138
|||| || |||||||
Sbjct: 106 cggacggggggagta 120
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 54.0 bits (27), Expect = 6e-07
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 60 taaaaatggatgtatctaga-actaaaatacgtctagatacat 101
|||||||||| ||||||| | ||||||||||||||||||||||
Sbjct: 84 taaaaatggacgtatctatatactaaaatacgtctagatacat 42
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 63 aaatggatgtatctagaactaaaatacgtctagatacatccattt 107
||||||| |||| |||||||||||||| |||||||| ||| ||||
Sbjct: 36 aaatggacgtatttagaactaaaatacatctagatatatctattt 80
>RF00906;MIR1122;EU282716.1/1526-1412 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 67 ggatgtatctagaactaaaatacgtctagatacatcc 103
|||||||| ||| ||| ||||||||||||||||||||
Sbjct: 76 ggatgtatttagcactgaaatacgtctagatacatcc 40
>RF00906;MIR1122;AY663392.1/105130-105016 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 72 tatctagaactaaaatacgtctagatacatccatttctctgacaagtatttccggatgga 131
||||||||| ||||| | ||||||||||| |||||| | ||||||||||| | ||| |
Sbjct: 71 tatctagaattaaaacaagtctagatacaaccatttgtagaacaagtatttctgaatgaa 12
Query: 132 gggagtag 139
||||||||
Sbjct: 11 gggagtag 4
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 141
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 79 aactaaaatacgtctagatacatccatttctctgacaagtattt 122
|||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 64 aactaaaataaatctagatacatctatttctaggacaagtattt 21
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 113 acaagtatttccggatggagggagta 138
||||||||||||||| ||||||||||
Sbjct: 112 acaagtatttccggacggagggagta 137
>RF00906;MIR1122;EU862571.1/695-592 98113:Hordeum murinum subsp.
glaucum
Length = 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 agtactccctccgtcccaaaaagcttgt 47
|||||||||||||||||||||| |||||
Sbjct: 102 agtactccctccgtcccaaaaaacttgt 75
>RF00906;MIR1122;EU862588.1/607-710 4516:Hordeum bulbosum
Length = 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaagcttgt 47
|||||||||| |||||||||||||||||
Sbjct: 3 agtactcccttcgtcccaaaaagcttgt 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 27 cctccgtcccaaaaagcttgtc 48
||||||||||||||||||||||
Sbjct: 95 cctccgtcccaaaaagcttgtc 74
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 63 aaatggatgtatctagaactaaaatacgtctagatacat 101
||||| |||||||||||| ||||||| |||||||||||
Sbjct: 36 aaatgaatgtatctagaattaaaataaatctagatacat 74
>RF00906;MIR1122;AF254799.1/60623-60744 4513:Hordeum vulgare
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 62 aaaatggatgtatctagaactaaaatacgtctaga 96
|||||||||||||| |||||||||||| |||||||
Sbjct: 35 aaaatggatgtatc-agaactaaaatatgtctaga 68
>RF00906;MIR1122;AF446141.1/45135-45243 37682:Aegilops tauschii
Length = 109
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 22 tactccctccgtcccaaaaagcttgtcgctcaaatggat 60
||||||||||||||| ||||| ||| | |||||||||||
Sbjct: 5 tactccctccgtccctaaaagtttgaccctcaaatggat 43
>RF00906;MIR1122;AAAA02014698.1/33454-33543 39946:Oryza sativa
Indica Group
Length = 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 aagtactccctccgtcccaaaaa 41
|||||||||||||||||||||||
Sbjct: 2 aagtactccctccgtcccaaaaa 24
>RF00906;MIR1122;AP006171.2/9738-9583 39947:Oryza sativa Japonica
Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaag 42
|||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaaag 25
>RF00906;MIR1122;AACV01010622.1/23023-23178 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 aagtactccctccgtcccaaaaa 41
|||||||||||||||||||||||
Sbjct: 2 aagtactccctccgtcccaaaaa 24
>RF00906;MIR1122;CR855173.1/25497-25408 4530:Oryza sativa (rice)
Length = 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 aagtactccctccgtcccaaaaa 41
|||||||||||||||||||||||
Sbjct: 2 aagtactccctccgtcccaaaaa 24
>RF00906;MIR1122;CT832702.1/1285-1384 39946:Oryza sativa Indica
Group
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 taagtactccctccgtcccaaaa 40
|||||||||||||||||||||||
Sbjct: 100 taagtactccctccgtcccaaaa 78
>RF00906;MIR1122;AAAA02015207.1/7418-7517 39946:Oryza sativa
Indica Group
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 taagtactccctccgtcccaaaa 40
|||||||||||||||||||||||
Sbjct: 1 taagtactccctccgtcccaaaa 23
>RF00906;MIR1122;AC025783.10/100980-101130 39947:Oryza sativa
Japonica Group
Length = 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 19 aagtactccctccgtcccaaaaa 41
|||||||||||||||||||||||
Sbjct: 150 aagtactccctccgtcccaaaaa 128
>RF00906;MIR1122;AACV01017892.1/4248-4093 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 19 aagtactccctccgtcccaaaaa 41
|||||||||||||||||||||||
Sbjct: 155 aagtactccctccgtcccaaaaa 133
>RF00906;MIR1122;AP004994.2/80471-80627 39947:Oryza sativa Japonica
Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 taagtactccctccgtcccaaaa 40
|||||||||||||||||||||||
Sbjct: 157 taagtactccctccgtcccaaaa 135
>RF00906;MIR1122;AACV01015141.1/40750-40841 39947:Oryza sativa
Japonica Group
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaag 42
|||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaaag 25
>RF01058;MIR806;ABXC01000117.1/227422-227180 4558:Sorghum bicolor
(sorghum)
Length = 243
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 gtactccctccgtcccaaaaag 42
||||||||||||||||||||||
Sbjct: 1 gtactccctccgtcccaaaaag 22
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 gtactccctccgtcccaaaaag 42
||||||||||||||||||||||
Sbjct: 243 gtactccctccgtcccaaaaag 222
>RF00906;MIR1122;ABXC01002132.1/397783-397672 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 gtactccctccgtcccaaaaag 42
||||||||||||||||||||||
Sbjct: 109 gtactccctccgtcccaaaaag 88
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 18 taagtactccctccgtcccaaa 39
||||||||||||||||||||||
Sbjct: 94 taagtactccctccgtcccaaa 73
>RF00906;MIR1122;EF059989.1/74343-74464 29664:Brachypodium
sylvaticum
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 60 taaaaatggatgtatctagaactaaaatacgtctagatacat 101
|||| ||||||||||||| | ||||| ||||||||||||||
Sbjct: 40 taaacatggatgtatctatagttaaaaaacgtctagatacat 81
>RF00906;MIR1122;AAAA02002553.1/2264-2375 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 19 aagtactccctccgtcccaaaa 40
||||||||||||||||||||||
Sbjct: 111 aagtactccctccgtcccaaaa 90
>RF00906;MIR1122;AAAA02003310.1/4753-4639 39946:Oryza sativa
Indica Group
Length = 115
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaa 41
||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaaa 24
>RF00906;MIR1122;AP008217.1/1240656-1240769 39947:Oryza sativa
Japonica Group
Length = 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 20 agtactccctccgtcccaaaaa 41
||||||||||||||||||||||
Sbjct: 112 agtactccctccgtcccaaaaa 91
>RF00906;MIR1122;AAAA02033081.1/3802-3711 39946:Oryza sativa
Indica Group
Length = 92
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 aagtactccctccgtcccaaaa 40
||||||||||||||||||||||
Sbjct: 2 aagtactccctccgtcccaaaa 23
>RF00906;MIR1122;CR855084.1/66223-66112 4530:Oryza sativa (rice)
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaa 41
||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaaa 24
>RF00906;MIR1122;AAAA02030644.1/62271-62160 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaa 41
||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaaa 24
>RF00906;MIR1122;AP008210.1/17746245-17746133 39947:Oryza sativa
Japonica Group
Length = 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaa 41
||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaaa 24
>RF00906;MIR1122;AACV01025370.1/11561-11672 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaa 41
||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaaa 24
>RF00906;MIR1122;AACV01013045.1/9312-9408 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 20 agtactccctccgtcccaaaaa 41
||||||||||||||||||||||
Sbjct: 95 agtactccctccgtcccaaaaa 74
>RF00906;MIR1122;AACV01024204.1/3332-3459 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaa 41
||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaaa 24
>RF00906;MIR1122;AL772423.4/33732-33621 4530:Oryza sativa (rice)
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaa 41
||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaaa 24
>RF00906;MIR1122;AACV01018362.1/12376-12241 39947:Oryza sativa
Japonica Group
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 gtactccctccgtcccaaaaag 42
||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaaag 25
>RF00906;MIR1122;AAAA02010499.1/21534-21382 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 aagtactccctccgtcccaaaa 40
||||||||||||||||||||||
Sbjct: 2 aagtactccctccgtcccaaaa 23
>RF00906;MIR1122;AC123519.2/136575-136462 39947:Oryza sativa
Japonica Group
Length = 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 agtactccctccgtcccaaaaa 41
||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaaa 24
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 aagtactccctccgtcccaaaa 40
||||||||||||||||||||||
Sbjct: 2 aagtactccctccgtcccaaaa 23
