miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 192 bits (97), Expect = 9e-49
Identities = 112/117 (95%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagtt 64
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 65 ctagatacatccatttttatgcatttctacgacaagtattttgggacggagggagta 121
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 105 gacaagtattttcggacggagggagtactac 135
||||||||||| |||||||||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagtactac 1
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 192 bits (97), Expect = 9e-49
Identities = 112/117 (95%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagtt 62
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 61 ctagatacatccatttttatgcatttctacgacaagtattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 105 gacaagtattttcggacggagggagta 131
||||||||||| |||||||||||||||
Sbjct: 95 gacaagtatttccggacggagggagta 121
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 170 bits (86), Expect = 3e-42
Identities = 114/122 (93%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatcta-gatgtattttagt 73
||||||||||||||| ||||||||||| |||||||||||||||| | |||||||||||||
Sbjct: 122 tactccctccgtccgaaaatacttgtccgaggaatggatgtatcaaagatgtattttagt 63
Query: 74 tctagatacatccatttttatccatttctctgacaagtattttcggacggagggagtact 133
||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 62 tctagatacatccatttatatccatttctgcgacaagtatttccggacggagggagtact 3
Query: 134 ac 135
||
Sbjct: 2 ac 1
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 93 atccatttctctgacaagtattttcggacggagggagtacta 134
||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 84 atccattcctcggacaagtattttcggacggagggagtacta 125
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggat 53
|||||||||||||||||||||||||||| || |||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgcagaaatggat 43
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 168 bits (85), Expect = 1e-41
Identities = 109/117 (93%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct: 121 tactccctctgtccggaaatacttgtcagaggaatggatgtacctagacgtattttagtt 62
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 61 ctagatacatccatttttatgcatttctccgacaagtatttcaggacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatg 50
|||||||||||||| |||||||||||||||| ||||
Sbjct: 5 tactccctccgtcctgaaatacttgtcggagaaatg 40
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 93 atccatttctctgacaagtattttcggacggagggagtac 132
||||||| ||||||||||||||| ||||| ||||||||||
Sbjct: 83 atccattcctctgacaagtatttccggacagagggagtac 122
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 161 bits (81), Expect = 3e-39
Identities = 108/117 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtccggaaatatttgtcataggaatggatgtatctagatgtattttagtt 64
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
||||||| |||||||||||||||||| | ||||||||| || |||||||||||||||
Sbjct: 65 ctagatatatccatttttatccatttgtgtgacaagtaattccggacggagggagta 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtc 41
|||||||||||||||||| ||||||||
Sbjct: 121 tactccctccgtccggaattacttgtc 95
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 153 bits (77), Expect = 8e-37
Identities = 107/117 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||||||||||||||||||||||||||| |||| || ||||||||||||||||| ||
Sbjct: 121 tactccctccgtccggaaatacttgtcggagaaatgaatctatctagatgtattttaatt 62
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||||||||||||||||| | |||||||| || ||||| |||||||||
Sbjct: 61 ctagatacatccatttttatccatttatgcgacaagtaattccggacagagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 96 catttctctgacaagtattttcggacggagggagta 131
|||||||| ||||||||||| |||||||||||||||
Sbjct: 86 catttctccgacaagtatttccggacggagggagta 121
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 actactccctccgtccggaaatacttgtcg 42
||||||||||| |||||||| |||||||||
Sbjct: 3 actactccctctgtccggaattacttgtcg 32
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 153 bits (77), Expect = 8e-37
Identities = 107/117 (91%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||||||||||| || || ||||||||| |||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagtt 64
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 65 ctagatacatccatttttatccatttctgcaacaagtagttccggacggagggagta 121
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 93 atccatttctctgacaagtattttcggacggagggagta 131
||||||||||| ||||| || ||||||||||||||||||
Sbjct: 43 atccatttctccgacaaataatttcggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggat 53
|||||||||||||||||| ||||||| | || |||||||
Sbjct: 121 tactccctccgtccggaactacttgttgcagaaatggat 83
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 147 bits (74), Expect = 5e-35
Identities = 107/118 (90%)
Strand = Plus / Plus
Query: 13 actactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttag 72
||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3 actactcccgccgtccggaaatacttgtcataggaatggatgtatctagatgtattttag 62
Query: 73 ttctagatacatccatttttatccatttctctgacaagtattttcggacggagggagt 130
||||||||||||||||||||||| |||| | |||||||| || |||| ||||||||
Sbjct: 63 ttctagatacatccatttttatcaatttatgcgacaagtaattctggacagagggagt 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 93 atccatttctctgacaagtattttcggacggagggagta 131
||||||| || |||||||||||| ||||||| |||||||
Sbjct: 43 atccattcctatgacaagtatttccggacggcgggagta 5
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 139 bits (70), Expect = 1e-32
Identities = 109/122 (89%)
Strand = Plus / Plus
Query: 13 actactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttag 72
||||||||||| ||||| ||||||||||| | |||| ||||||||||||||||||||
Sbjct: 3 actactccctctgtccgaaaatacttgtcattgagatgggtgtatctagatgtattttag 62
Query: 73 ttctagatacatccatttttatccatttctctgacaagtattttcggacggagggagtac 132
|||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 63 ttctagatacattcatttttatccattttgatgacaagtattttcggacagagggagtac 122
Query: 133 ta 134
||
Sbjct: 123 ta 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 104 tgacaagtattttcggacggagggagta 131
|||||||||||||||||| |||||||||
Sbjct: 32 tgacaagtattttcggacagagggagta 5
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 125 bits (63), Expect = 2e-28
Identities = 102/115 (88%)
Strand = Plus / Minus
Query: 16 actccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagttc 75
|||||||||||| | ||||||| |||||| |||| ||||||||||||||||||||||||
Sbjct: 115 actccctccgtctgaaaatactcgtcggaagaattaatgtatctagatgtattttagttc 56
Query: 76 tagatacatccatttttatccatttctctgacaagtattttcggacggagggagt 130
||||||||| ||||||| |||||||| ||||||||||| || |||||||||||
Sbjct: 55 tagatacatttatttttaggcatttctccgacaagtatttccgaacggagggagt 1
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 16 actccctccgtccggaaatacttgtcggaggaatg 50
||||||||||| |||||||||||||||||| ||||
Sbjct: 1 actccctccgttcggaaatacttgtcggagaaatg 35
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 123 bits (62), Expect = 7e-28
Identities = 80/86 (93%)
Strand = Plus / Minus
Query: 50 ggatgtatctagatgtattttagttctagatacatccatttttatccatttctctgacaa 109
|||||||||||||||||||||||||||| |||||||| ||||| ||||||| ||||||
Sbjct: 86 ggatgtatctagatgtattttagttctaaatacatccctttttgtccattttgatgacaa 27
Query: 110 gtattttcggacggagggagtactac 135
||||||||||||||||||||||||||
Sbjct: 26 gtattttcggacggagggagtactac 1
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 74 tctagatacatccatttttatccatttctctgacaagtattttcggacggagggagtac 132
||||||||||||| |||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 74 tctagatacatccccttttattcattttgatgacaagtatttccggacggagggagtac 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtc 41
||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtc 31
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 121 bits (61), Expect = 3e-27
Identities = 103/117 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 5 tactcccttcgtccggaaatacttgtccaaagaatggatgtatctagatgtattttagtt 64
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
||||||||||||||| ||| ||||| | |||||||| || || | ||||||||||
Sbjct: 65 atagatacatccatttctattcatttttgcgacaagtaattccgcatggagggagta 121
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 121 bits (61), Expect = 3e-27
Identities = 103/117 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||||||||||||||||| || ||||| || |||||||||||||||| |||||||||||
Sbjct: 121 tactccctccgtccggaattatttgtcatagaaatggatgtatctagacgtattttagtt 62
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||||||| | ||||||| |||||||| || |||||||||||||||
Sbjct: 61 ctagatacatccatttctttccattttgacgacaagtacttccggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcg 42
|||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtccggaagtacttgtcg 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 93 atccatttctctgacaagtattttcggacggagggagta 131
|||||||||| |||||| || || |||||||||||||||
Sbjct: 83 atccatttctatgacaaataattccggacggagggagta 121
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 121 bits (61), Expect = 3e-27
Identities = 91/101 (90%)
Strand = Plus / Minus
Query: 31 aaatacttgtcggaggaatggatgtatctagatgtattttagttctagatacatccattt 90
||||||||||| ||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 105 aaatacttgtcataggaatgtatgtatctagatgtattataattctagatacatccattt 46
Query: 91 ttatccatttctctgacaagtattttcggacggagggagta 131
|||| ||||| | ||||||||| || |||||||||||||||
Sbjct: 45 ttatacatttatgtgacaagtaattccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtc 41
|||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtccggaattacttgtc 31
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 121 bits (61), Expect = 3e-27
Identities = 104/117 (88%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||| ||| ||| |||| ||||||||| ||| |||||||||||||||| |||||||| ||
Sbjct: 5 tactgcctacgttcggatatacttgtcagagaaatggatgtatctagacgtattttactt 64
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||||||||||||||||| || ||||||||||| ||| ||||||||||
Sbjct: 65 ctagatacatccatttttatccattt-tccaacaagtatttttggatggagggagta 120
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 117 bits (59), Expect = 4e-26
Identities = 101/115 (87%)
Strand = Plus / Minus
Query: 12 aactactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtatttta 71
|||||||||||||||| | |||||||||||| | ||||||||||||||||||| ||||||
Sbjct: 124 aactactccctccgtcagaaaatacttgtcgaaagaatggatgtatctagatgcatttta 65
Query: 72 gttctagatacatccatttttatccatttctctgacaagtattttcggacggagg 126
|||||| |||||| ||||| ||||||||| | || ||||| || ||||||||||
Sbjct: 64 gttctaaatacattcatttctatccatttttgcgataagtaattccggacggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 105 gacaagtattttcggacggagggagta 131
||||||||||||| |||||||||||||
Sbjct: 95 gacaagtattttctgacggagggagta 121
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 111 bits (56), Expect = 3e-24
Identities = 102/116 (87%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 13 actactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgta-tttta 71
|||||||||||| ||||||||||| |||||||| ||| |||||||||| | ||| |||||
Sbjct: 123 actactccctccatccggaaatacctgtcggagaaatagatgtatctaaacgtattttta 64
Query: 72 gttctagatacatccatttttatccatttctctgacaagtattttcggacggaggg 127
||||||||||||| |||||||| |||||||| |||||||| || |||| ||||||
Sbjct: 63 gttctagatacattcatttttacccatttctacgacaagtaattccggatggaggg 8
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 109 bits (55), Expect = 1e-23
Identities = 100/115 (86%)
Strand = Plus / Minus
Query: 14 ctactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagt 73
||||||||||||| | ||| |||| ||| || |||| |||||||||||||||||||| |
Sbjct: 122 ctactccctccgttcagaattactcgtccaagaaatgaatgtatctagatgtattttaat 63
Query: 74 tctagatacatccatttttatccatttctctgacaagtattttcggacggaggga 128
| ||||||||||||||||||||||||| | |||| |||| ||||| |||||||||
Sbjct: 62 tgtagatacatccatttttatccatttttgtgacgagtaatttcgaacggaggga 8
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 109 bits (55), Expect = 1e-23
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||||||||||| ||||||||||| ||| ||| |||||||||||| |||||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtctgagaaattgatgtatctagacgtattttagtt 64
Query: 75 ctagatacatccatttttatccatttc 101
||| |||||| |||||| |||||||||
Sbjct: 65 ctaaatacattcattttaatccatttc 91
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 97 atttctctgacaagtattttcggacggagggagtac 132
||||||| ||||||||||||||||||||||||||||
Sbjct: 39 atttctcagacaagtattttcggacggagggagtac 4
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 105 bits (53), Expect = 2e-22
Identities = 102/117 (87%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||| |||||||| ||||||||||||||||| |||||||| ||||||| || |||||||
Sbjct: 5 tacttcctccgtctggaaatacttgtcggagaaatggatgcatctagacgtgctttagtt 64
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|| | |||| ||||||||||||||| || |||||||||| |||||||||||||||
Sbjct: 65 ttatacacattcatttttatccattt-tcccacaagtatttccggacggagggagta 120
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 14 ctactccctccgtccggaaatacttgt 40
|||||||||||||||||||||||||||
Sbjct: 121 ctactccctccgtccggaaatacttgt 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 93 atccatttctctgacaagtattttcggacggagggagta 131
||||||||||| ||||||||||| | |||||||| ||||
Sbjct: 43 atccatttctccgacaagtatttccagacggaggaagta 5
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 105 bits (53), Expect = 2e-22
Identities = 101/117 (86%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||||| ||||||||||||||||||||| | |||||||||||| |||| ||||||||||
Sbjct: 5 tactccttccgtccggaaatacttgtcgaaagaatggatgtatttagacatattttagtt 64
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
||||| ||||||||| ||| ||||| | ||||||||||| | ||||||||||||
Sbjct: 65 ttagatgcatccatttatattcatttttgcgacaagtatttctgaacggagggagta 121
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 actactccctccgtccggaaatacttgtcg 42
|||||||||||||| | |||||||||||||
Sbjct: 123 actactccctccgttcagaaatacttgtcg 94
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 105 bits (53), Expect = 2e-22
Identities = 102/117 (87%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||||||||||||||||||||||| || ||| ||||||||||| ||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgtcctagagatgaatgtatctagacttattttagtt 61
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||| | ||||||||| | ||||||||||| |||||||||||||||
Sbjct: 60 atagatacatcca-atatatccatttttaggacaagtatttccggacggagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtc 41
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtc 31
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 105 gacaagtattttcggacggagggagtac 132
||||||||||| ||||||||||||||||
Sbjct: 94 gacaagtatttccggacggagggagtac 121
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 105 bits (53), Expect = 2e-22
Identities = 101/117 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||||||||| |||| ||||||||| | ||||||| |||||||||||| ||||||||||
Sbjct: 121 tactccctccatccgaaaatacttggcataggaatgtatgtatctagatatattttagtt 62
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||| ||||||||| |||| | |||||||| || |||||||| ||||||
Sbjct: 61 ctagatacattcatttttatatatttgtgcgacaagtaattccggacggacggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 aaactactccctccgtccggaaatacttgtcg 42
|||||||||| ||||||||||| |||||||||
Sbjct: 1 aaactactccgtccgtccggaattacttgtcg 32
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 107 caagtattttcggacggagggagtacta 134
|||||||||||||| |||||||||||||
Sbjct: 97 caagtattttcggatggagggagtacta 124
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 103 bits (52), Expect = 6e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||||| |||| ||||||||||||| | ||||||||||||||||||||||| ||||
Sbjct: 5 tactccctctgtcccgaaatacttgtcgcggaaatggatgtatctagatgtatttcagtt 64
Query: 75 ctagatacatccattt 90
||||||||||||||||
Sbjct: 65 ctagatacatccattt 80
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 29 ggaaatacttgtcggaggaatggatgtatctaga 62
|||| ||||||||| || ||||||||||||||||
Sbjct: 97 ggaattacttgtcgtagaaatggatgtatctaga 64
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 103 bits (52), Expect = 6e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||||||||||| | ||| ||||||||| | | |||||||||||||||||||||||||||
Sbjct: 111 tactccctccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagtt 52
Query: 75 ctagatacatccattt 90
||||||||||||||||
Sbjct: 51 ctagatacatccattt 36
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 13 actactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttag 72
||||||||||||||||| ||||||||||| | ||||||| ||||||||||||||||||
Sbjct: 113 actactccctccgtccgaaaatacttgtcattgaaatggatatatctagatgtattttag 54
Query: 73 ttctagatacatccatttt 91
||||||| |||||||||||
Sbjct: 53 ttctagacacatccatttt 35
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 92 tatccatttctctgacaagtattttcggacggagggagta 131
|||||||||| ||||||||||||||||||||||||||||
Sbjct: 72 tatccatttcaatgacaagtattttcggacggagggagta 111
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 101 bits (51), Expect = 3e-21
Identities = 103/119 (86%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||||||||||||||||||||||||| | | ||| || |||||||| ||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgttctaaggatgaatatatctagacttattttagtt 61
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagtact 133
|||||||||||||| | || ||||||| ||||||||||| |||||||||||||||||
Sbjct: 60 atagatacatccattat-attcatttctgggacaagtatttccggacggagggagtact 3
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtc 41
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtc 31
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 106 acaagtattttcggacggagggagtactac 135
|||||||||| |||||||||||||||||||
Sbjct: 95 acaagtatttccggacggagggagtactac 124
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 50 ggatgtatctagatgtattttagttctagatacatccatttttatccatttctctgacaa 109
||||||||||||||||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 86 ggatgtatctagatgtattttagttctagatacatttcttattatccattttgatgacaa 27
Query: 110 gtattttcggacggagggagtac 132
||||||||| |||||||||||||
Sbjct: 26 gtattttcgaacggagggagtac 4
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 89 ttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||| |||||||||||| |||||||||||||||
Sbjct: 90 ttttatccattttggtgacaagtatttccggacggagggagta 132
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 51 gatgtatctagatgtattttagttctagatacatccatttttatccatttctctgacaag 110
||||||||||||||||||||| |||||||||||| | ||||||||||||| |||||||
Sbjct: 85 gatgtatctagatgtattttaattctagatacattcttttttatccattttgatgacaag 26
Query: 111 tattttcggacggagggagtac 132
|||||||||||| || ||||||
Sbjct: 25 tattttcggacgaagcgagtac 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 74 tctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||| |||||||||||| |||||||||||| |||||||| |||||
Sbjct: 74 tctagatacatcttcttttatccattttgatgacaagtatttctggacggagagagta 131
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||||||||||| ||||| |||||||| || |||||||||||||||| |||||||||||
Sbjct: 111 tactccctccgttcggaattacttgtctcagaaatggatgtatctagacgtattttagtt 52
Query: 75 ctagatacatccatttt 91
||||||| |||||||||
Sbjct: 51 ctagatagatccatttt 35
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 aactactccctccgtccggaaatacttgtc 41
||||||||||||||| ||||| ||||||||
Sbjct: 2 aactactccctccgttcggaattacttgtc 31
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 93.7 bits (47), Expect = 6e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 14 ctactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagt 73
||||||| ||||| |||| ||||||||| || |||| ||||||||||||||||||||||
Sbjct: 112 ctactccatccgtttggaattacttgtcgcagaaatgaatgtatctagatgtattttagt 53
Query: 74 tctagatacatccat 88
|||||||||||||||
Sbjct: 52 tctagatacatccat 38
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 93.7 bits (47), Expect = 6e-19
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 50 ggatgtatctagatgtattttagttctagatacatccatttttatccatttctctgacaa 109
|||||||| ||||||||||||||||||||||| ||| ||||| | ||||| ||||||
Sbjct: 49 ggatgtatttagatgtattttagttctagatatatctctttttgttcattttgatgacaa 108
Query: 110 gtattttcggacggagggagtac 132
|||||||||||||||||||||||
Sbjct: 109 gtattttcggacggagggagtac 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtc 41
||||||||||||||| |||||||||||
Sbjct: 130 tactccctccgtccgaaaatacttgtc 104
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||||||||||| | ||| ||||||||| | |||||||||||||||| ||||||||||
Sbjct: 111 tactccctccgttctgaattacttgtcgaaaaaatggatgtatctagacatattttagtt 52
Query: 75 ctagatacatccattttt 92
||||||||||||||||||
Sbjct: 51 ctagatacatccattttt 34
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 91.7 bits (46), Expect = 2e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 50 ggatgtatctagatgtattttagttctagatacatccatttttatccatttctctgacaa 109
|||||||||||||||||||||||||||||||||| | |||||||||||| ||||||
Sbjct: 86 ggatgtatctagatgtattttagttctagatacaccactttttatccattctgatgacaa 27
Query: 110 gtattttcggacggagggagta 131
||||| |||||||||||||||
Sbjct: 26 atatttccggacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 74 tctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
||||||||||||| |||||| ||| | |||||||||||| |||||||||||||||
Sbjct: 74 tctagatacatccccttttattcatcttgatgacaagtatttccggacggagggagta 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtc 41
||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtccggaaatatttgtc 31
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 13 actactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttag 72
|||||||||||||| | ||| |||| |||| || ||||||||||||||||||||||||||
Sbjct: 3 actactccctccgttctgaattactcgtcgcagaaatggatgtatctagatgtattttag 62
Query: 73 ttctagatacatccattt 90
|| |||||| ||||||||
Sbjct: 63 ttttagatatatccattt 80
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 91.7 bits (46), Expect = 2e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 50 ggatgtatctagatgtattttagttctagatacatccatttttatccatttctctgacaa 109
|||||||||||||||||||||||||||| ||||||| ||||| | ||| | ||||||
Sbjct: 61 ggatgtatctagatgtattttagttctacatacatctctttttgttcatattgatgacaa 120
Query: 110 gtattttcggacggagggagta 131
||||||||||||||||||||||
Sbjct: 121 gtattttcggacggagggagta 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtc 41
||||||||||||||| |||||||||||
Sbjct: 142 tactccctccgtccgaaaatacttgtc 116
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 91.7 bits (46), Expect = 2e-18
Identities = 101/118 (85%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||||||||| | ||||||||| | || ||||| ||||| |||| ||||||||||
Sbjct: 120 tactccctccgtctgaaaatacttgccctagaaatggttgtatgtagacttattttagtt 61
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagtac 132
||||||||| || |||||| ||||||| ||||||||||| ||||||||||||||||
Sbjct: 60 atagatacat-caattttattcatttctaggacaagtatttgcggacggagggagtac 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtc 41
||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtccgcaaatacttgtc 31
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 91.7 bits (46), Expect = 2e-18
Identities = 101/118 (85%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 14 ctactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagt 73
||||||||||||| |||||||||||||| | |||| ||||||||||| |||||||||
Sbjct: 121 ctactccctccgttcggaaatacttgtcctaaaaatgaatgtatctagacttattttagt 62
Query: 74 tctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
| |||||||||| | || ||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 61 tatagatacatcta-ttatattcatttctaggacaagtatttctggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtc 41
|||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccagaaatacttgtc 31
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 51 gatgtatctagatgtattttagttctagatacatccatttttatccatttctctgacaag 110
||||||||||||||||| |||||| |||||| |||| ||||||||||||| ||||||
Sbjct: 51 gatgtatctagatgtatattagttttagatatatccttttttatccattttgatgacaat 110
Query: 111 tattttcggacggagggagta 131
|||||| ||||||||||||||
Sbjct: 111 tatttttggacggagggagta 131
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||
Sbjct: 111 tactccctccgttcggaattacttgtcgcgaaaatggatgtatctagacgtattttagtt 52
Query: 75 ctagatacatccatttt 91
||||||||||| |||||
Sbjct: 51 ctagatacatctatttt 35
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 47 aatggatgtatctagatgtattttagttctagatacatccatttttatccatttctctga 106
|||| |||||| |||| |||||||||||||| |||||||||||||||||| |||||| ||
Sbjct: 89 aatgaatgtatttagacgtattttagttctacatacatccatttttatccgtttctccga 30
Query: 107 caagtatt 114
||||||||
Sbjct: 29 caagtatt 22
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 87.7 bits (44), Expect = 4e-17
Identities = 75/84 (89%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 51 gatgtatctagatgtattttagttctagatacatccatttttatccatttctctgacaag 110
|||||||||||| ||||||| || |||||||||||||||| || ||||| | |||||||
Sbjct: 41 gatgtatctagacttattttacttatagatacatccatttt-atacatttttatgacaag 99
Query: 111 tattttcggacggagggagtacta 134
||||| ||||||||||||||||||
Sbjct: 100 tatttccggacggagggagtacta 123
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtc 41
|||||||||||||||||||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgtc 94
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 13 actactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttag 72
||||| |||||||| | ||| ||||||||| | ||||||||||| |||||||||||||
Sbjct: 113 actacgccctccgttccgaattacttgtcgcacttatggatgtatcaagatgtattttag 54
Query: 73 ttctagatacatccatttt 91
|||||||||||||||||||
Sbjct: 53 ttctagatacatccatttt 35
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 52 atgtatctagatgtattttagttctagatacatccatttttatccatttctctgacaagt 111
|||||| |||||||||||||||||||| |||||| ||||||||||||| ||||||||
Sbjct: 84 atgtatatagatgtattttagttctaggtacatcattttttatccattttgatgacaagt 25
Query: 112 attttcggacg 122
|||||||||||
Sbjct: 24 attttcggacg 14
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 48 atggatgtatctagatgtattttagttctagatacatccattt 90
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 atggatgtatctagatgtattttagttctagatacatccattt 79
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 52 atgtatctagatgtattttagttctagatacatccatttttatccatttctctgacaagt 111
|||||||||||| |||||||||||||| |||||| ||||||||||||| ||||||||
Sbjct: 84 atgtatctagatatattttagttctaggtacatctctttttatccattttgatgacaagt 25
Query: 112 attttcggacg 122
|||||||||||
Sbjct: 24 attttcggacg 14
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 104 tgacaagtattttcggacggagggagta 131
||||||||||||||||||||||||||||
Sbjct: 104 tgacaagtattttcggacggagggagta 131
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 65 tattttagttctagatacatccatttttatccatttctctgacaagtattttcggacgga 124
||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 65 tattttagttctaaatacatttatttttatccattttgatgacaagtattttcggacgga 124
Query: 125 gggagta 131
|||||||
Sbjct: 125 gggagta 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 104 tgacaagtattttcggacggagggagta 131
||||||||||||||||||| ||||||||
Sbjct: 32 tgacaagtattttcggacgaagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtc 41
||||||||||||||| |||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtc 105
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 83.8 bits (42), Expect = 6e-16
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 50 ggatgtatctagatgtattttagttctagatacatccatttttatccatttctctgacaa 109
||||||||||||| ||||||||||||||||||||| |||||| || || ||||||
Sbjct: 50 ggatgtatctagacatattttagttctagatacatctctttttagtcactttgatgacaa 109
Query: 110 gtattttcggacggagggagta 131
||||||||||||||||||||||
Sbjct: 110 gtattttcggacggagggagta 131
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 74 tctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
||||||||||||| |||||||||||| |||||||||||| |||||||||||||||
Sbjct: 62 tctagatacatccccttttatccattttgatgacaagtatttccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtc 41
||||||||||||||| |||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtc 105
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 18 tccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagttcta 77
||||||||| ||||| ||||||||| || |||||||||||||||| | ||| |||||||
Sbjct: 8 tccctccgttcggaattacttgtcgtagaaatggatgtatctagacatttttcagttcta 67
Query: 78 gatacatccattt 90
|||||||||||||
Sbjct: 68 gatacatccattt 80
>RF00906;MIR1122;AK249975.1/2279-2156 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 81.8 bits (41), Expect = 2e-15
Identities = 99/117 (84%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||||||||| |||||||||||||||| | ||| ||||||| |||| ||||||||||
Sbjct: 5 tactccctccatccggaaatacttgtcttaaaaatagatgtatgtagaattattttagtt 64
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|| ||||| ||| |||||| |||||| |||||||||||||||||||| ||||||
Sbjct: 65 ataaatacaccca-ttttatttatttctaggacaagtattttcggacggatggagta 120
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 81.8 bits (41), Expect = 2e-15
Identities = 99/117 (84%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||| ||||||||||||||||||| | ||| ||||||||| || ||||||||||
Sbjct: 120 tactccccccgtccggaaatacttgtcctaaagatgaatgtatctaaatttattttagtt 61
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
| |||||||||| || ||||||||||| ||||| |||||||||| |||||||||
Sbjct: 60 atggatacatcca-ttatatccatttctaggacaaatattttcggatagagggagta 5
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 81.8 bits (41), Expect = 2e-15
Identities = 98/117 (83%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||||||||||||||||| |||||| | | |||||||| ||||| | ||||||||||
Sbjct: 5 tactccctccgtccggaattacttgacataaaaatggatgcatctaaacatattttagtt 64
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
||| |||||| ||||| | ||||||| ||||||||| || |||||||||||||||
Sbjct: 65 ctaaatacattcatttatttccattttggtgacaagtaattccggacggagggagta 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtc 41
|||||||||||||||||| ||||||||
Sbjct: 121 tactccctccgtccggaattacttgtc 95
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 14 ctactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagt 73
|||||||||| || || || |||| ||| || |||| ||||||||||||||||||||||
Sbjct: 112 ctactccctctgttcgaaattactcgtccaagaaatgaatgtatctagatgtattttagt 53
Query: 74 tctagatacatccatttttat 94
| |||||||||||||||||||
Sbjct: 52 tatagatacatccatttttat 32
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatcta 60
|||||||||||| ||||| |||||||| | ||||||||||||||
Sbjct: 5 tactccctccgttcggaattacttgtcataaaaatggatgtatcta 50
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 79.8 bits (40), Expect = 9e-15
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 47 aatggatgtatctagatgtattttagttctagatacatccattt 90
|||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 37 aatggatgtatctagatgtattttagttatagatacatccattt 80
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 28 cggaaatacttgtcggaggaatggatgtatctagatgtattttagttctagatacatcca 87
||||| ||||||||| || |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 26 cggaattacttgtcgcagaaatggatgtatctagacgagttttagttctagatacattca 85
Query: 88 tttt 91
||||
Sbjct: 86 tttt 89
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 71.9 bits (36), Expect = 2e-12
Identities = 100/120 (83%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 13 actactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttag 72
||||||||||||||| ||||||||||| | |||||||| ||||||| ||||||||
Sbjct: 3 actactccctccgtctaaaaatacttgtcctaaaaatggatgaatctagacttattttag 62
Query: 73 ttctagatacatccatttttatccatttctctgacaagtattttcggacggagggagtac 132
|| |||||||||||| || ||| |||| | | ||||||||| ||||||||||||||||
Sbjct: 63 ttatagatacatcca-ttatatttatttttaggtcaagtatttccggacggagggagtac 121
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttg 39
|||||||||||||||||||||||||
Sbjct: 120 tactccctccgtccggaaatacttg 96
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 18 tccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtatttt-agttct 76
|||||| |||||||| |||||| || | |||||||||||||||| | ||||| ||||||
Sbjct: 110 tccctctgtccggaattacttgccgcaaaaatggatgtatctagacgcatttttagttct 51
Query: 77 agatacatccattt 90
||||||||||||||
Sbjct: 50 agatacatccattt 37
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 67.9 bits (34), Expect = 4e-11
Identities = 99/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||| ||||||| ||||||||||||| || ||| |||||||||||| ||||||| ||
Sbjct: 5 tactacctccgttcggaaatacttgttttagagatgaatgtatctagatttattttaatt 64
Query: 75 ctagatacatccatttttatccatttctctgacaa-gtattttcggacggagggagta 131
||||||| || | || ||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 65 atagatacttc-agttatatccatttctaggacaaagtattttgggacggagggagta 121
>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
Length = 124
Score = 67.9 bits (34), Expect = 4e-11
Identities = 98/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||| |||||||||||||||||||||| | ||| ||||||||||| |||| || ||
Sbjct: 120 tactacctccgtccggaaatacttgtcctacagatgaatgtatctagacttattctaatt 61
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagtac 132
|||||||||||||| | || |||| | |||||||||||||||||||| |||||||
Sbjct: 60 gtagatacatccattat-atgtatttttaggacaagtattttcggacggatggagtac 4
>RF00906;MIR1122;FJ427399.1/11963-11864 4571:Triticum turgidum
Length = 100
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 89 ttttatccatttctctgacaagtattttcggacggagggagtact 133
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 47 ttttatccattttgatgacaagtattttcggacggagggagtact 3
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 89 ttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 54 ttttatccattttgatgacaagtattttcggacggaggaagta 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtc 41
||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtc 31
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 51 gatgtatctagatgtattttagttctagatacatccattt 90
||||||||||| |||||||||||||||||||||| |||||
Sbjct: 41 gatgtatctagttgtattttagttctagatacattcattt 80
>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 123
Score = 60.0 bits (30), Expect = 9e-09
Identities = 96/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||| |||||||||||||| |||| | |||| ||||||||||| ||||||||||
Sbjct: 119 tactccccccgtccggaaatacctgtcttcgaaatgaatgtatctagacttattttagtt 60
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|| ||||||| |||||| || | | ||||||||||||| |||||||||||||
Sbjct: 59 atacatacatc--attttatttatctttaggacaagtattttctgacggagggagta 5
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 55 tatctagatgtattttagttctagatacatccattt 90
||||||||||||||||||||||| |||| |||||||
Sbjct: 71 tatctagatgtattttagttctaaatacgtccattt 36
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 52 atgtatctagatgtattttagttctagatacatccattt 90
|||||||||||| ||||||| |||||||||||| |||||
Sbjct: 74 atgtatctagatttattttaattctagatacattcattt 36
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 52 atgtatctagatgtattttagttctagatacatccattt 90
||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 74 atgtatctagacgtatttcagtgctagatacatccattt 36
>RF00906;MIR1122;AY951949.1/1544-1411 4568:Triticum monococcum
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 104 tgacaagtattttcggacggagggagtact 133
|||||||||||||||||||||| |||||||
Sbjct: 32 tgacaagtattttcggacggagagagtact 3
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgt 40
||||||||||||||||||||||||||
Sbjct: 137 tactccctccgtccggaaatacttgt 112
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 106 acaagtattttcggacggagggagtacta 134
|||||||||| ||||||||||||||||||
Sbjct: 112 acaagtatttccggacggagggagtacta 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 31 aaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||||||| || ||| ||||||||||||| ||||||||||
Sbjct: 21 aaatacttgtcctagaaatagatgtatctagatttattttagtt 64
>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
Length = 147
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatct 59
|||||||||||| | ||| ||||||||| ||| ||||||||||||
Sbjct: 143 tactccctccgttccgaattacttgtcgcaggtatggatgtatct 99
>RF00906;MIR1122;EF104384.1/242-122 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 121
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 13 actactccctccgtccggaaatacttgtc 41
||||||||||||||||||||| |||||||
Sbjct: 120 actactccctccgtccggaaaaacttgtc 92
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 52 atgtatctagatgtattttagt-tctagatacatccattttta 93
||||||||||| |||||||||| | ||||||| ||||||||||
Sbjct: 42 atgtatctagacgtattttagtatatagatacgtccattttta 84
