miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 165 bits (83), Expect = 3e-40
Identities = 110/119 (92%)
Strand = Plus / Minus
Query: 29 tgtactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttag 88
||||||| ||| ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 123 tgtactccctctgtccggaaatacttgtcagaggaatggatgtacctagacgtattttag 64
Query: 89 ttctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
|||||||||||| ||||||||| ||||||| ||||||||| ||| ||||||||||||||
Sbjct: 63 ttctagatacatccatttttatgcatttctccgacaagtatttcaggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatg 66
||||| |||||||| |||||||||||| ||||||||
Sbjct: 5 tactccctccgtcctgaaatacttgtcggagaaatg 40
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 161 bits (81), Expect = 4e-39
Identities = 108/117 (92%)
Strand = Plus / Plus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| ||||||||| || || ||||| ||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagtt 64
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
|||||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||||
Sbjct: 65 ctagatacatccatttttatccatttctgcaacaagtagttccggacggagggagta 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 112 catttctgcgacaagtaattccggacggagggagta 147
||||||| |||||| ||||| |||||||||||||||
Sbjct: 40 catttctccgacaaataatttcggacggagggagta 5
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 153 bits (77), Expect = 1e-36
Identities = 107/117 (91%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| ||||||||||||||||||||| |||||||| || |||||||| |||||||| ||
Sbjct: 121 tactccctccgtccggaaatacttgtcggagaaatgaatctatctagatgtattttaatt 62
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
|||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 61 ctagatacatccatttttatccatttatgcgacaagtaattccggacagagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 109 attcatttctgcgacaagtaattccggacggagggagta 147
|||||||||| ||||||||| ||||||||||||||||||
Sbjct: 83 attcatttctccgacaagtatttccggacggagggagta 121
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 149 bits (75), Expect = 2e-35
Identities = 109/119 (91%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 30 gtactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagt 89
|||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 4 gtactccctccgtccgaaaatacttgtctgagaaattgatgtatctagacgtattttagt 63
Query: 90 tctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagtac 148
|||| ||||||||||||| || |||||| || |||||||||||||||| ||||||||||
Sbjct: 64 tctaaatacattcattttaatccatttcggc-acaagtaattccggacagagggagtac 121
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 147 bits (74), Expect = 6e-35
Identities = 111/122 (90%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 30 gtactctctccgtccggaaatacttgtcagagaaatggatgtatcta-gacgtattttag 88
|||||| ||||||||| ||||||||||| ||| |||||||||||| | || |||||||||
Sbjct: 123 gtactccctccgtccgaaaatacttgtccgaggaatggatgtatcaaagatgtattttag 64
Query: 89 ttctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagtac 148
|||||||||||| ||||| ||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 63 ttctagatacatccatttatatccatttctgcgacaagtatttccggacggagggagtac 4
Query: 149 ta 150
||
Sbjct: 3 ta 2
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 30 gtactctctccgtccggaaatacttgtcagagaaatggat 69
|||||| ||||||||||||||||||||| ||||||||||
Sbjct: 4 gtactccctccgtccggaaatacttgtcgcagaaatggat 43
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 121 gacaagtaattccggacggagggagtacta 150
|||||||| || ||||||||||||||||||
Sbjct: 96 gacaagtattttcggacggagggagtacta 125
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 147 bits (74), Expect = 6e-35
Identities = 107/118 (90%)
Strand = Plus / Plus
Query: 30 gtactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagt 89
|||||| ||||||||||||||||||||| | | |||||||||||||||| ||||||||||
Sbjct: 4 gtactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagt 63
Query: 90 tctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
||||||||||| ||||||||| ||||||| ||||||||| || ||||||||||||||
Sbjct: 64 tctagatacatccatttttatgcatttctacgacaagtattttgggacggagggagta 121
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 120 cgacaagtaattccggacggagggagtacta 150
||||||||| |||||||||||||||||||||
Sbjct: 32 cgacaagtatttccggacggagggagtacta 2
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 145 bits (73), Expect = 2e-34
Identities = 106/117 (90%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| ||||||||||||||||||||| | | |||||||||||||||| |||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagtt 62
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
|||||||||| ||||||||| ||||||| ||||||||| || ||||||||||||||
Sbjct: 61 ctagatacatccatttttatgcatttctacgacaagtattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 120 cgacaagtaattccggacggagggagta 147
||||||||| ||||||||||||||||||
Sbjct: 94 cgacaagtatttccggacggagggagta 121
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 145 bits (73), Expect = 2e-34
Identities = 106/117 (90%)
Strand = Plus / Plus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| ||| ||||||||||| |||||| || |||||||||||||||| |||||||||||
Sbjct: 5 tactccctctgtccggaaatatttgtcataggaatggatgtatctagatgtattttagtt 64
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
||||||| || ||||||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 65 ctagatatatccatttttatccatttgtgtgacaagtaattccggacggagggagta 121
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggat 69
||||| |||||||||||| ||||||||| | ||||||||
Sbjct: 121 tactccctccgtccggaattacttgtcacacaaatggat 83
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 143 bits (72), Expect = 9e-34
Identities = 99/108 (91%)
Strand = Plus / Plus
Query: 39 ccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagatac 98
|||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||
Sbjct: 13 ccgtccggaaatacttgtcataggaatggatgtatctagatgtattttagttctagatac 72
Query: 99 attcatttttattcatttctgcgacaagtaattccggacggagggagt 146
|| ||||||||| |||| ||||||||||||||| |||| ||||||||
Sbjct: 73 atccatttttatcaatttatgcgacaagtaattctggacagagggagt 120
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 137 bits (69), Expect = 6e-32
Identities = 105/117 (89%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| |||||||||||| || |||||| |||||||||||||||||||||||||||||||
Sbjct: 121 tactccctccgtccggaattatttgtcatagaaatggatgtatctagacgtattttagtt 62
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
|||||||||| ||||| | | ||||| ||||||||| ||||||||||||||||||
Sbjct: 61 ctagatacatccatttctttccattttgacgacaagtacttccggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 112 catttctgcgacaagtaattccggacggagggagta 147
||||||| ||||| |||||||||||||||||||||
Sbjct: 86 catttctatgacaaataattccggacggagggagta 121
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 131 bits (66), Expect = 4e-30
Identities = 103/114 (90%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtatttt-agt 89
||||| |||| ||||||||||| |||| ||||||| |||||||||| ||||||||| |||
Sbjct: 121 tactccctccatccggaaatacctgtcggagaaatagatgtatctaaacgtatttttagt 62
Query: 90 tctagatacattcatttttattcatttctgcgacaagtaattccggacggaggg 143
|||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 61 tctagatacattcatttttacccatttctacgacaagtaattccggatggaggg 8
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 131 bits (66), Expect = 4e-30
Identities = 105/118 (88%)
Strand = Plus / Minus
Query: 30 gtactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagt 89
|||||| |||| |||| ||||||||| || || |||| ||||||||||| |||||||||
Sbjct: 122 gtactccctccatccgaaaatacttggcataggaatgtatgtatctagatatattttagt 63
Query: 90 tctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||
Sbjct: 62 tctagatacattcatttttatatatttgtgcgacaagtaattccggacggacggagta 5
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 129 bits (65), Expect = 1e-29
Identities = 104/117 (88%)
Strand = Plus / Plus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| || |||||||||||||||||| | |||||||||||||||| |||||||||||
Sbjct: 5 tactcccttcgtccggaaatacttgtccaaagaatggatgtatctagatgtattttagtt 64
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
||||||||| ||||| ||||||||| ||||||||||||||||| | ||||||||||
Sbjct: 65 atagatacatccatttctattcatttttgcgacaagtaattccgcatggagggagta 121
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 121 bits (61), Expect = 3e-27
Identities = 91/101 (90%)
Strand = Plus / Minus
Query: 47 aaatacttgtcagagaaatggatgtatctagacgtattttagttctagatacattcattt 106
|||||||||||| || |||| ||||||||||| ||||| || |||||||||||| |||||
Sbjct: 105 aaatacttgtcataggaatgtatgtatctagatgtattataattctagatacatccattt 46
Query: 107 ttattcatttctgcgacaagtaattccggacggagggagta 147
|||| ||||| || |||||||||||||||||||||||||||
Sbjct: 45 ttatacatttatgtgacaagtaattccggacggagggagta 5
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 115 bits (58), Expect = 2e-25
Identities = 82/90 (91%)
Strand = Plus / Plus
Query: 27 tatgtactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtatttt 86
|||||||| || ||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatgtactgcctacgttcggatatacttgtcagagaaatggatgtatctagacgtatttt 60
Query: 87 agttctagatacattcatttttattcattt 116
| |||||||||||| ||||||||| |||||
Sbjct: 61 acttctagatacatccatttttatccattt 90
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 113 bits (57), Expect = 8e-25
Identities = 102/117 (87%)
Strand = Plus / Plus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| |||||||||||| |||||| || | ||||||||| ||||| || ||||||||||
Sbjct: 5 tactccctccgtccggaattacttgacataaaaatggatgcatctaaacatattttagtt 64
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
||| |||||||||||| | | ||||| | |||||||||||||||||||||||||||
Sbjct: 65 ctaaatacattcatttatttccattttggtgacaagtaattccggacggagggagta 121
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 123 caagtaattccggacggagggagta 147
|||||||||||||||||||||||||
Sbjct: 29 caagtaattccggacggagggagta 5
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 111 bits (56), Expect = 3e-24
Identities = 104/120 (86%)
Strand = Plus / Plus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| ||| ||||| |||||||||||| || |||| |||||||||| |||||||||||
Sbjct: 5 tactccctctgtccgaaaatacttgtcattgagatgggtgtatctagatgtattttagtt 64
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagtacta 150
|||||||||||||||||||| ||||| |||||||| || ||||| ||||||||||||
Sbjct: 65 ctagatacattcatttttatccattttgatgacaagtattttcggacagagggagtacta 124
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 111 bits (56), Expect = 3e-24
Identities = 98/112 (87%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| ||||||| | ||||||||||| | |||||||||||||||| | |||||||||
Sbjct: 121 tactccctccgtcagaaaatacttgtcgaaagaatggatgtatctagatgcattttagtt 62
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggagg 142
||| |||||||||||| ||| ||||| ||||| |||||||||||||||||||
Sbjct: 61 ctaaatacattcatttctatccatttttgcgataagtaattccggacggagg 10
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 109 bits (55), Expect = 1e-23
Identities = 98/111 (88%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 37 ctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagat 96
||||||| ||||||||||||| |||||||||||| |||||||||| ||||||| || |
Sbjct: 11 ctccgtctggaaatacttgtcggagaaatggatgcatctagacgtgctttagttttatac 70
Query: 97 acattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
|||||||||||||| ||||| | | ||||||| ||||||||||||||||||
Sbjct: 71 acattcatttttatccattt-tcccacaagtatttccggacggagggagta 120
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgt 56
||||| ||||||||||||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgt 95
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 107 bits (54), Expect = 5e-23
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 38 tccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagata 97
|||||||||||||||||||| | ||||||||||| ||||| |||||||||| |||||
Sbjct: 12 tccgtccggaaatacttgtcgaaagaatggatgtatttagacatattttagttttagatg 71
Query: 98 cattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
||| ||||| ||||||||| ||||||||||| ||| | ||||||||||||
Sbjct: 72 catccatttatattcatttttgcgacaagtatttctgaacggagggagta 121
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 103 bits (52), Expect = 8e-22
Identities = 104/120 (86%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 28 atgtactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtatttta 87
|||||||| ||||||||||||||||||||| ||| ||| |||||||||||| |||||||
Sbjct: 123 atgtactccctccgtccggaaatacttgtcctagagatgaatgtatctagacttatttta 64
Query: 88 gttctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
||| ||||||||| || | ||| ||||| | |||||||| ||||||||||||||||||
Sbjct: 63 gttatagatacatcca-atatatccatttttaggacaagtatttccggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 121 gacaagtaattccggacggagggagtac 148
|||||||| |||||||||||||||||||
Sbjct: 94 gacaagtatttccggacggagggagtac 121
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 31 tactctctccgtccggaaatacttgtc 57
||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtc 31
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 103 bits (52), Expect = 8e-22
Identities = 104/120 (86%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 30 gtactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagt 89
|||||| |||||||||||||||||||| | ||| || ||||||||| |||||||||
Sbjct: 121 gtactccctccgtccggaaatacttgttctaaggatgaatatatctagacttattttagt 62
Query: 90 tctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagtact 149
| ||||||||| |||| | ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 61 tatagatacatccattat-attcatttctgggacaagtatttccggacggagggagtact 3
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 30 gtactctctccgtccggaaatacttgtcagagaaatg 66
|||||| ||||||||||||||||||||| |||||||
Sbjct: 4 gtactccctccgtccggaaatacttgtcccagaaatg 40
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 122 acaagtaattccggacggagggagtacta 150
||||||| |||||||||||||||||||||
Sbjct: 95 acaagtatttccggacggagggagtacta 123
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 68 atgtatctagacgtattttagttctagatacattcatttttattcatttctgcgacaagt 127
||||||||||| |||||||||||||||||||||| ||||||| ||||||| ||||||||
Sbjct: 79 atgtatctagatgtattttagttctagatacatttatttttaggcatttctccgacaagt 20
Query: 128 aattccggacggagggagt 146
| ||||| |||||||||||
Sbjct: 19 atttccgaacggagggagt 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 32 actctctccgtccggaaatacttgtcagagaaatg 66
|||| |||||| |||||||||||||| ||||||||
Sbjct: 1 actccctccgttcggaaatacttgtcggagaaatg 35
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 99.6 bits (50), Expect = 1e-20
Identities = 102/118 (86%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| ||||||| | ||||||||| | |||||||| ||||| ||||| ||||||||||
Sbjct: 120 tactccctccgtctgaaaatacttgccctagaaatggttgtatgtagacttattttagtt 61
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagtac 148
||||||||| || |||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 60 atagatacat-caattttattcatttctaggacaagtatttgcggacggagggagtac 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 28 atgtactctctccgtccggaaatacttgtcagagaaatg 66
|||||||| ||||||||| ||||||||||| |||||||
Sbjct: 2 atgtactccctccgtccgcaaatacttgtcctagaaatg 40
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 30 gtactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagt 89
|||||| |||||| ||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 112 gtactccctccgttcggaattacttgtctcagaaatggatgtatctagacgtattttagt 53
Query: 90 tctagatacattcatttt 107
|||||||| || ||||||
Sbjct: 52 tctagatagatccatttt 35
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 112 catttctgcgacaagtaattccggacggagggagtact 149
|||||||| |||||||||||||| ||||||||||||||
Sbjct: 76 catttctgagacaagtaattccgaacggagggagtact 113
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 97.6 bits (49), Expect = 5e-20
Identities = 101/117 (86%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| |||||| |||||||||||||| | ||||| |||||||||||| ||||||||||
Sbjct: 120 tactccctccgttcggaaatacttgtcctaaaaatgaatgtatctagacttattttagtt 61
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
|||||||| || || ||||||||||| |||||||| ||| ||||||||||||||
Sbjct: 60 atagataca-tctattatattcatttctaggacaagtatttctggacggagggagta 5
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| ||||||||| |||||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 111 tactccctccgtccgaaaatacttgtcattgaaatggatatatctagatgtattttagtt 52
Query: 91 ctagatacattcatttt 107
||||| |||| ||||||
Sbjct: 51 ctagacacatccatttt 35
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 44 cggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagatacattca 103
||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 26 cggaattacttgtcgcagaaatggatgtatctagacgagttttagttctagatacattca 85
Query: 104 tttt 107
||||
Sbjct: 86 tttt 89
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 112 catttctgcgacaagtaattccg 134
|||||||||||||||||||||||
Sbjct: 48 catttctgcgacaagtaattccg 26
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 83.8 bits (42), Expect = 7e-16
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| |||||| | ||| |||| ||| ||||||| ||||||||||| |||||||| ||
Sbjct: 121 tactccctccgttcagaattactcgtccaagaaatgaatgtatctagatgtattttaatt 62
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggaggga 144
||||||||| ||||||||| ||||| || ||| ||||||| || |||||||||
Sbjct: 61 gtagatacatccatttttatccatttttgtgacgagtaatttcgaacggaggga 8
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| |||||| | ||| |||||||| | |||||||||||||||||| ||||||||||
Sbjct: 111 tactccctccgttctgaattacttgtcgaaaaaatggatgtatctagacatattttagtt 52
Query: 91 ctagatacattcattttt 108
|||||||||| |||||||
Sbjct: 51 ctagatacatccattttt 34
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| |||||| ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 111 tactccctccgttcggaattacttgtcgcgaaaatggatgtatctagacgtattttagtt 52
Query: 91 ctagatacat 100
||||||||||
Sbjct: 51 ctagatacat 42
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 119 gcgacaagtaattccggacggagggagta 147
|||||||||||||||| ||||||||||||
Sbjct: 83 gcgacaagtaattccgaacggagggagta 111
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 83.8 bits (42), Expect = 7e-16
Identities = 103/122 (84%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 29 tgtactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttag 88
||||||| || ||| || ||||||||||| | || | ||||||||||||| |||||||
Sbjct: 3 tgtactcccttcgttcgaaaatacttgtcctaaaagtagatgtatctagacttattttac 62
Query: 89 ttctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagtac 148
|| ||||||||| |||||| || ||||| | |||||||| |||||||||||||||||||
Sbjct: 63 ttatagatacatccatttt-atacatttttatgacaagtatttccggacggagggagtac 121
Query: 149 ta 150
||
Sbjct: 122 ta 123
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 30 gtactctctccgtccggaaatacttgtca 58
|||||| ||||||||||||||||||||||
Sbjct: 121 gtactccctccgtccggaaatacttgtca 93
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 30 gtactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagt 89
|||||| ||| |||| |||||||||||| |||||||||||||||||| |||||| |||
Sbjct: 4 gtactccctctgtcccgaaatacttgtcgcggaaatggatgtatctagatgtatttcagt 63
Query: 90 tctagatacattcattt 106
||||||||||| |||||
Sbjct: 64 tctagatacatccattt 80
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 112 catttctgcgacaagtaattccggacggagggagtact 149
|||||| |||||||||| ||| |||| |||||||||||
Sbjct: 40 catttccgcgacaagtatttcgggacagagggagtact 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 45 ggaaatacttgtcagagaaatggatgtatctaga 78
|||| |||||||| |||||||||||||||||||
Sbjct: 97 ggaattacttgtcgtagaaatggatgtatctaga 64
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 27 tatgtactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtatttt 86
|||||| || |||||| ||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 1 tatgtattccctccgttcggaattacttgtcgtagaaatggatgtatctagacatttttc 60
Query: 87 agttctagatacattcattt 106
|||||||||||||| |||||
Sbjct: 61 agttctagatacatccattt 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 112 catttctgcgacaagtaattccggacggaggga 144
||||||| ||||||||||||||| |||||||||
Sbjct: 40 catttctacgacaagtaattccgaacggaggga 8
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 62 aaatggatgtatctagacgtattttagttctagatacattcatttttattcatttctgcg 121
||||| |||||| ||||||||||||||||||| |||||| ||||||||| | ||||| ||
Sbjct: 90 aaatgaatgtatttagacgtattttagttctacatacatccatttttatccgtttctccg 31
Query: 122 acaagta 128
|||||||
Sbjct: 30 acaagta 24
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 75.8 bits (38), Expect = 2e-13
Identities = 87/102 (85%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 47 aaatacttgtcagagaaatggatgtatctagacgtattttagttctagatacattcattt 106
||||||||||| | ||||||||| |||||||| |||||||||| ||||||||| || ||
Sbjct: 21 aaatacttgtcctaaaaatggatgaatctagacttattttagttatagatacatcca-tt 79
Query: 107 ttattcatttctgcgacaagtaattccggacggagggagtac 148
|||| |||| | | |||||| |||||||||||||||||||
Sbjct: 80 atatttatttttaggtcaagtatttccggacggagggagtac 121
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 29 tgtactctctccgtccggaaatacttg 55
||||||| |||||||||||||||||||
Sbjct: 122 tgtactccctccgtccggaaatacttg 96
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 73.8 bits (37), Expect = 7e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 66 ggatgtatctagacgtattttagttctagatacattcatttttattcatttctgcgacaa 125
||||||||||||| |||||||||||||| |||||| | ||||| | ||||| |||||
Sbjct: 86 ggatgtatctagatgtattttagttctaaatacatccctttttgtccattttgatgacaa 27
Query: 126 gtaattccggacggagggagtacta 150
||| || ||||||||||||||||||
Sbjct: 26 gtattttcggacggagggagtacta 2
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 90 tctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagtac 148
||||||||||| | |||||||||||| |||||||| |||||||||||||||||||
Sbjct: 74 tctagatacatccccttttattcattttgatgacaagtatttccggacggagggagtac 132
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 45 ggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagatacat 100
|||| |||||||| ||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 97 ggaattacttgtcgcagaaatgaatgtatctagatgtattttagttctagatacat 42
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 109 attcatttctgcgacaagtaattccggacggagggagta 147
||||||||||||||||||||||||| ||||| ||||||
Sbjct: 73 attcatttctgcgacaagtaattccaaacggatggagta 111
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 60 agaaatggatgtatctagacgtattttagttctagatacattcattt 106
|||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 34 agaaatagatgtatctagttgtattttagttctagatacattcattt 80
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 64 atggatgtatctagacgtattttagttctagatacattcattt 106
||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 37 atggatgtatctagatgtattttagttctagatacatccattt 79
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 60 agaaatggatgtatctagacgtattttagttctagatacattcatttttat 110
||||||| ||||||||||| ||||||||||| ||||||||| |||||||||
Sbjct: 82 agaaatgaatgtatctagatgtattttagttatagatacatccatttttat 32
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 30 gtactctctccgtccggaaatacttgtcagagaaatggatgtatcta 76
|||||| |||||| ||||| ||||||||| | |||||||||||||||
Sbjct: 4 gtactccctccgttcggaattacttgtcataaaaatggatgtatcta 50
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 66 ggatgtatctagacgtattttagttctagatacattcatttttattcatttctgcgacaa 125
||||||||||||| |||||||||||||||||||||| || |||| ||||| |||||
Sbjct: 86 ggatgtatctagatgtattttagttctagatacatttcttattatccattttgatgacaa 27
Query: 126 gtaattccggacggagggagtac 148
||| || || |||||||||||||
Sbjct: 26 gtattttcgaacggagggagtac 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 121 gacaagtaattccggacggagggagta 147
|||||||| ||||||||||||||||||
Sbjct: 106 gacaagtatttccggacggagggagta 132
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 64 atggatgtatctagacgtattttagttctagatacattcattt 106
||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 78 atggatgtatctagatgtattttagttctagatacatccattt 36
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 118 tgcgacaagtaattccggacggagggagtacta 150
||||||||||||||| | |||||||||||||||
Sbjct: 82 tgcgacaagtaattcggaacggagggagtacta 114
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 66 ggatgtatctagacgtattttagttctagatacattcatttttattcatttctgcgacaa 125
|||||||||||||| |||||||||||||||||||| |||||| ||| || |||||
Sbjct: 50 ggatgtatctagacatattttagttctagatacatctctttttagtcactttgatgacaa 109
Query: 126 gtaattccggacggagggagta 147
||| || |||||||||||||||
Sbjct: 110 gtattttcggacggagggagta 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 121 gacaagtaattccggacggagggagta 147
|||||||| ||||||||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagta 5
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 66 ggatgtatctagacgtattttagttctagatacattcatttttattcatttctgcgacaa 125
|||||||| || || ||||||||||||| ||||||| |||||||| ||||| |||||
Sbjct: 50 ggatgtatttaaacatattttagttctaaatacatttatttttatccattttgatgacaa 109
Query: 126 gtaattccggacggagggagta 147
||| || |||||||||||||||
Sbjct: 110 gtattttcggacggagggagta 131
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 67 gatgtatctagacgtattttagttctagatacattcatttttattcattt 116
|||||||||||| |||||||| |||||||||||||| ||||||| |||||
Sbjct: 85 gatgtatctagatgtattttaattctagatacattcttttttatccattt 36
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 62 aaatggatgtatctagacgtattttagttctagatacattcattt 106
||||||||||||||||| ||||||||||| ||||||||| |||||
Sbjct: 36 aaatggatgtatctagatgtattttagttatagatacatccattt 80
>RF00906;MIR1122;AK249975.1/2279-2156 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 65.9 bits (33), Expect = 2e-10
Identities = 97/117 (82%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| |||| |||||||||||||||| | |||| ||||||| |||| ||||||||||
Sbjct: 5 tactccctccatccggaaatacttgtcttaaaaatagatgtatgtagaattattttagtt 64
Query: 91 ctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
|| ||||| || ||||||| |||||| |||||||| || |||||||| ||||||
Sbjct: 65 ataaatacaccca-ttttatttatttctaggacaagtattttcggacggatggagta 120
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 64 atggatgtatctagacgtattttagttctagatacattcatttt 107
||||||||||| ||| ||||||||||||||||||||| ||||||
Sbjct: 78 atggatgtatcaagatgtattttagttctagatacatccatttt 35
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||| |||||| | ||| |||| ||| ||||||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgttctgaattactcgtcgcagaaatggatgtatctagatgtattttagtt 64
Query: 91 ctagatacattcattt 106
|||||| || |||||
Sbjct: 65 ttagatatatccattt 80
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 112 catttctgcgacaagtaattccggacggagggagta 147
|||||||||||| |||||||| | ||||||||||||
Sbjct: 40 catttctgcgacgagtaattcagaacggagggagta 5
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 61.9 bits (31), Expect = 3e-09
Identities = 72/83 (86%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 66 ggatgtatctagacgtattttagttctagatacattcatttttattcatttctg-cgaca 124
||||||||||||| |||||||||||||||||||| ||||||| || ||||| ||||
Sbjct: 86 ggatgtatctagatgtattttagttctagatacaccactttttatcca-ttctgatgaca 28
Query: 125 agtaattccggacggagggagta 147
| || ||||||||||||||||||
Sbjct: 27 aatatttccggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtca 58
||||| ||||||||||||||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtca 104
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 121 gacaagtaattccggacggagggagta 147
|||||||| ||||||||||||||||||
Sbjct: 105 gacaagtatttccggacggagggagta 131
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 66 ggatgtatctagacgtattttagttctagatacattcatttttattcatttctgcgacaa 125
|||||||| |||| |||||||||||||||||| || ||||| ||||||| |||||
Sbjct: 49 ggatgtatttagatgtattttagttctagatatatctctttttgttcattttgatgacaa 108
Query: 126 gtaattccggacggagggagtac 148
||| || ||||||||||||||||
Sbjct: 109 gtattttcggacggagggagtac 131
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 41 gtccggaaatacttgtcagagaaatggatgtatctagacgta-ttttagttctagataca 99
|||||||| |||||| | | ||||||||||||||||||| | |||||||||||||||||
Sbjct: 103 gtccggaattacttgccgcaaaaatggatgtatctagacgcatttttagttctagataca 44
Query: 100 ttcattt 106
| |||||
Sbjct: 43 tccattt 37
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 112 catttctgcgacaagtaattccggacggagggagtacta 150
||||| |||| ||||||||||||||| |||||| |||||
Sbjct: 78 catttttgcggcaagtaattccggacagagggaatacta 116
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 66 ggatgtatctagacgtattttagttctagatacattcatttttattcatttctgcgacaa 125
||||||||||||| |||||||||||||| |||||| ||||| ||||| | |||||
Sbjct: 61 ggatgtatctagatgtattttagttctacatacatctctttttgttcatattgatgacaa 120
Query: 126 gtaattccggacggagggagta 147
||| || |||||||||||||||
Sbjct: 121 gtattttcggacggagggagta 142
>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 123
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 39 ccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagatac 98
|||||||||||||| |||| |||||| |||||||||||| |||||||||| || ||||
Sbjct: 111 ccgtccggaaatacctgtcttcgaaatgaatgtatctagacttattttagttatacatac 52
Query: 99 at 100
||
Sbjct: 51 at 50
>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
Length = 124
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 37 ctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagat 96
||||||||||||||||||||| | | ||| |||||||||||| |||| || || |||||
Sbjct: 114 ctccgtccggaaatacttgtcctacagatgaatgtatctagacttattctaattgtagat 55
Query: 97 acattcatt 105
|||| ||||
Sbjct: 54 acatccatt 46
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 31 tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
|||||||||||| ||| || |||||| || ||| ||||||||||| ||||||| ||
Sbjct: 111 tactctctccgtttcgaattatttgtcataggtatgaatgtatctagatttattttaatt 52
Query: 91 ctagatacattcattt 106
||||||||||||||||
Sbjct: 51 ctagatacattcattt 36
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 68 atgtatctagacgtattttagttctagatacattcattt 106
|||||||||||||||||| ||| |||||||||| |||||
Sbjct: 74 atgtatctagacgtatttcagtgctagatacatccattt 36
>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
Length = 147
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 50 tacttgtcagagaaatggatgtatctagacgtattttagttctagatacattcattt 106
||||||||| ||| ||| || ||| || | |||||||||||||||||| ||||||||
Sbjct: 24 tacttgtcacagatatgaatatatataaatgtattttagttctagatatattcattt 80
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 117 ctgcgacaagtaattccggacggagggagtac 148
|||||||||||||||| | |||||||||||||
Sbjct: 113 ctgcgacaagtaattcggaacggagggagtac 144
>RF00906;MIR1122;AY951949.1/1544-1411 4568:Triticum monococcum
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 30 gtactctctccgtccggaaatacttgtca 58
|||||||||||||||| ||||||||||||
Sbjct: 4 gtactctctccgtccgaaaatacttgtca 32
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 141
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 122 acaagtaattccggacggagggagtacta 150
||||||| |||||||||||||||||||||
Sbjct: 112 acaagtatttccggacggagggagtacta 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 47 aaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
||||||||||| |||||| |||||||||||| ||||||||||
Sbjct: 21 aaatacttgtcctagaaatagatgtatctagatttattttagtt 64
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 gtactctctccgtccggaaatacttgt 56
|||||| ||||||||||||||||||||
Sbjct: 138 gtactccctccgtccggaaatacttgt 112
>RF00906;MIR1122;AY663392.1/105130-105016 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 62 aaatggatgtatctagacgtattttagttctagatacattcattttta 109
|||||| ||||||||||| | ||||| ||||||||| | |||||||||
Sbjct: 36 aaatggttgtatctagacttgttttaattctagatataatcattttta 83
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 48.1 bits (24), Expect = 4e-05
Identities = 92/112 (82%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 37 ctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagat 96
|||||| ||||||||||||| ||| ||| ||||||||||| ||||||| || |||||
Sbjct: 11 ctccgttcggaaatacttgttttagagatgaatgtatctagatttattttaattatagat 70
Query: 97 acattcatttttattcatttctgcgac-aagtaattccggacggagggagta 147
|| |||| || ||| ||||||| ||| ||||| || ||||||||||||||
Sbjct: 71 ac-ttcagttatatccatttctaggacaaagtattttgggacggagggagta 121
>RF00906;MIR1122;EF059989.1/67137-67261 29664:Brachypodium
sylvaticum
Length = 125
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 124 aagtaattccggacggagggagta 147
||||||||||||||||||||||||
Sbjct: 98 aagtaattccggacggagggagta 121
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 39 ccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagatac 98
||||||||||||||||||| | | ||| ||||||||| | |||||||||| | |||||
Sbjct: 112 ccgtccggaaatacttgtcctaaagatgaatgtatctaaatttattttagttatggatac 53
Query: 99 attcatt 105
|| ||||
Sbjct: 52 atccatt 46
>RF00906;MIR1122;EU282716.1/1526-1412 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 66 ggatgtatctagacgtattttagttctagatacat 100
|||||||||||||||||||| ||| ||| ||||||
Sbjct: 40 ggatgtatctagacgtatttcagtgctaaatacat 74
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 68 atgtatctagacgtattttagt-tctagatacattcattttta 109
|||||||||||||||||||||| | ||||||| | ||||||||
Sbjct: 42 atgtatctagacgtattttagtatatagatacgtccattttta 84
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ctccgtccggaaatacttgtca 58
||||||||||||||||||||||
Sbjct: 11 ctccgtccggaaatacttgtca 32
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 67 gatgtatctagacgtattttagttctagatacattcatttttattcattt 116
|||||||||||| |||| |||||| |||||| || | ||||||| |||||
Sbjct: 51 gatgtatctagatgtatattagttttagatatatccttttttatccattt 100
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 90 tctagatacattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
||||||||||||| |||||||| | || |||||||| || |||||||||||||||
Sbjct: 74 tctagatacattcttttttatttactttgatgacaagtattttcggacggagggagta 131
>RF00906;MIR1122;EF059989.1/52700-52824 29664:Brachypodium
sylvaticum
Length = 125
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 120 cgacaagtaattccggacggagggagtact 149
|||||||||||||| | |||||||||||||
Sbjct: 32 cgacaagtaattccagccggagggagtact 3
