miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 168 bits (85), Expect = 1e-41
Identities = 109/117 (93%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 121 tactccctccgtccggaactacttgttgcagaaatggataaaaatggatgtatctagaac 62
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||
Sbjct: 61 taaaatacgtctagatacatccatttctccgacaaataatttcggacggagggagta 5
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 153 bits (77), Expect = 8e-37
Identities = 107/117 (91%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
||||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 121 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 62
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
|||||||| |||||||||| ||||| || ||||||||| || |||||||||||||||
Sbjct: 61 taaaatacatctagatacatccattcccccgacaagtatttccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 tagtactccctccgtcccgaattacttgtcg 41
||||||||||||||||| ||| |||||||||
Sbjct: 2 tagtactccctccgtccggaaatacttgtcg 32
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 153 bits (77), Expect = 8e-37
Identities = 107/117 (91%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
||||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 64
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
|||||||| |||||||||| ||||| || ||||||||| || |||||||||||||||
Sbjct: 65 taaaatacatctagatacatccattcccccgacaagtatttccggacggagggagta 121
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 129 bits (65), Expect = 1e-29
Identities = 108/121 (89%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 11 tagtactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctag 70
||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 2 tagtactccctccgtccggaaatacttgtcgcagaaatggatataaatggatgtatctag 61
Query: 71 aactaaaatacgtc-tagatacacccatttccgcgacaagtaatttcggacggagggagt 129
||||||||||| || | |||||| ||||| | |||||||| |||||||||||||||||
Sbjct: 62 aactaaaatacatctttgatacatccattcctcggacaagtattttcggacggagggagt 121
Query: 130 a 130
|
Sbjct: 122 a 122
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 94 ccatttccgcgacaagtaatttcggacggagggagta 130
||||||| |||||||||| || |||||||||||||||
Sbjct: 41 ccatttctgcgacaagtatttccggacggagggagta 5
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 129 bits (65), Expect = 1e-29
Identities = 104/117 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtcctgaaatacttgtcggagaaatgcataaaaatggatgtatctagaac 64
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
|||||||||||||| |||| ||||| | |||||||| || ||||| |||||||||
Sbjct: 65 taaaatacgtctaggtacatccattcctctgacaagtatttccggacagagggagta 121
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 129 bits (65), Expect = 1e-29
Identities = 104/117 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
||||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 5 tactccctctgtccggaattacttgtcgcataaatggataaaaatggatgtatctagaat 64
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
|||||||| |||||||| | |||||| ||||||||| || |||||||||||||||
Sbjct: 65 taaaatacatctagatagattcatttctccgacaagtatttccggacggagggagta 121
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaat 52
|||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtcggagaaatgaat 83
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 102 gcgacaagtaatttcggacggagggagtagta 133
||||||||||||| ||||| ||||||||||||
Sbjct: 33 gcgacaagtaattccggacagagggagtagta 2
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 125 bits (63), Expect = 2e-28
Identities = 105/119 (88%)
Strand = Plus / Minus
Query: 15 actccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaact 74
|||||||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 120 actccctctgtccagaattacttgtcgcataaattgataaaaatggatgtatctagaact 61
Query: 75 aaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagtagta 133
||||||| |||||||||| ||||| | |||||||| || ||||||| ||||||||||
Sbjct: 60 aaaatacatctagatacatccattcctatgacaagtatttccggacggcgggagtagta 2
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 121 bits (61), Expect = 3e-27
Identities = 103/117 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| ||| ||||||||| ||||| | | |||||||||||||||||||
Sbjct: 5 tactccctccgtccggaagtacttgtcgtcaaaatggaaagaaatggatgtatctagaac 64
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||
Sbjct: 65 taaaatacgtctagatacatccatttctatgacaaataattccggacggagggagta 121
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 115 bits (58), Expect = 2e-25
Identities = 104/118 (88%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 13 gtactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaa 72
|||||||||| |||| ||||||||||| || |||||| || |||||| |||||| |||||
Sbjct: 121 gtactccctctgtccggaattacttgt-gccgaaatggattaaaatgaatgtatttagaa 63
Query: 73 ctaaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
|||||||||||||||||||| | ||||| |||||||| ||||||||||||||||||
Sbjct: 62 ctaaaatacgtctagatacatcaatttctcagacaagtattttcggacggagggagta 5
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 113 bits (57), Expect = 7e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 54 aaaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaat 113
||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 35 aaaatagatgtatctagaactaaaatacgtctagatacatccattttcgcgacaagtaat 94
Query: 114 ttcggacggagggagta 130
| || ||||||||||||
Sbjct: 95 tccgaacggagggagta 111
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 113 bits (57), Expect = 7e-25
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| |||||||||||| || ||||| |||||||||||| ||||||||||
Sbjct: 121 tactccctccgtccggaattacttgtcacacaaatggataaaaatggatatatctagaac 62
Query: 74 taaaatacgtctagatacacccatt 98
|||||||| |||||||||| |||||
Sbjct: 61 taaaatacatctagatacatccatt 37
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 104 gacaagtaatttcggacggagggagta 130
||||||||||| |||||||||||||||
Sbjct: 95 gacaagtaattccggacggagggagta 121
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 109 bits (55), Expect = 1e-23
Identities = 106/123 (86%)
Strand = Plus / Minus
Query: 11 tagtactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctag 70
|||||||||||| |||| || |||||||| ||||| ||||||||| ||||||||||
Sbjct: 124 tagtactccctctgtccgaaaatacttgtcatcaaaatggataaaaatgaatgtatctag 65
Query: 71 aactaaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
||||||||||| ||||||||||||||| || |||||||| |||||||| |||||||||
Sbjct: 64 aactaaaatacatctagatacacccatctcaatgacaagtattttcggacagagggagta 5
Query: 131 gta 133
|||
Sbjct: 4 gta 2
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 54 aaaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaat 113
||||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||||
Sbjct: 35 aaaatggatctatctagaactaaaatacgtctagatacatccatttctgagacaagtaat 94
Query: 114 ttcggacggagggagta 130
| || ||||||||||||
Sbjct: 95 tccgaacggagggagta 111
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 83 tctagatacacccatttccgcgacaagtaatttcggacggagggagtagt 132
|||||||| | |||||| || ||||||||||| || ||||||||||||||
Sbjct: 52 tctagatagatccattttcgagacaagtaattccgaacggagggagtagt 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 12 agtactccctccgtcccgaattacttgtcgcagaaatg 49
|||||||||||||| | |||||||||||| ||||||||
Sbjct: 113 agtactccctccgttcggaattacttgtctcagaaatg 76
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 105 bits (53), Expect = 2e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||| | | ||||||||||||||| ||||||||| ||||||||||||||| |||
Sbjct: 121 tactccctccatgcggaattacttgtcgcaaaaatgaatagaaatggatgtatctataac 62
Query: 74 taaaatacgtctagatacacccatt 98
|||||||| |||||||||| |||||
Sbjct: 61 taaaatacatctagatacatccatt 37
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtccggaattacttgtcacataaatgtataaaaatggatgtatctagaat 64
Query: 74 taaaatacgtctagataca 92
|| ||||| ||||||||||
Sbjct: 65 tataatacatctagataca 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 104 gacaagtaatttcggacggagggagta 130
||||||||||| |||||||||||||||
Sbjct: 31 gacaagtaattccggacggagggagta 5
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 99.6 bits (50), Expect = 1e-20
Identities = 102/118 (86%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 18 ccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaact-aa 76
|||||| ||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||
Sbjct: 8 ccctccatccggaattacttgtcgtagaaatgggtaaaaatgaatgtatctagaactaaa 67
Query: 77 aatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagtagtag 134
||||||| |||||||| | ||||| ||||| ||| || |||| ||||||||||||||
Sbjct: 68 aatacgtttagatacatctatttctccgacaggtatttccggatggagggagtagtag 125
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 99.6 bits (50), Expect = 1e-20
Identities = 98/114 (85%)
Strand = Plus / Plus
Query: 19 cctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaactaaaa 78
||||||||| ||||||||| ||||| ||||| ||| ||||| |||||| |||||||||||
Sbjct: 10 cctccgtccggaattacttatcgcaaaaatggatagaaatgaatgtatttagaactaaaa 69
Query: 79 tacgtctagatacacccatttccgcgacaagtaatttcggacggagggagtagt 132
| | |||||||||| ||||| ||||||||| |||| |||||||||||||||
Sbjct: 70 tgcatctagatacatccattctttcgacaagtattttctgacggagggagtagt 123
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 97.6 bits (49), Expect = 4e-20
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 54 aaaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaat 113
||||||||||| |||||||||||||||| |||||||| | ||||||| |||||||| |
Sbjct: 35 aaaatggatgtgtctagaactaaaatacatctagatatatccatttcaatgacaagtatt 94
Query: 114 ttcggacggagggagtagtag 134
|||||||||||||||||||||
Sbjct: 95 ttcggacggagggagtagtag 115
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 97.6 bits (49), Expect = 4e-20
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||| | ||| ||||||||||| ||||||||| ||||||||| ||||| |||
Sbjct: 121 tactccctccgttcagaaatacttgtcgcaaaaatgaatataaatggatgcatctaaaac 62
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
||||||| ||||| ||||| ||||| ||||||||| || |||||||| ||||||
Sbjct: 61 taaaatatgtctaaatacatccattctttcgacaagtatttccggacggaaggagta 5
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 97.6 bits (49), Expect = 4e-20
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||| ||||||| ||||||||||||||| |||| ||||||||| |||||||||||||
Sbjct: 5 tactccgtccgtccggaattacttgtcgcacaaatatataaaaatgaatgtatctagaac 64
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
||||||| |||||||||| |||| | | |||||| ||||||| ||||||||||
Sbjct: 65 taaaatatatctagatacatacattcctatgccaagtattttcggatggagggagta 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 102 gcgacaagtaatttcggacggagggagtagt 132
||||||||||||| |||||||| ||||||||
Sbjct: 33 gcgacaagtaattccggacggacggagtagt 3
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 55 aaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaatt 114
|||||||||||||||||||| |||||| |||||||||| |||||||||||||||||| ||
Sbjct: 80 aaatggatgtatctagaactgaaatacatctagatacatccatttccgcgacaagtattt 21
Query: 115 tcggacggagggagta 130
|||| |||||||||
Sbjct: 20 cgggacagagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 12 agtactccctccgtcccgaattacttgtcgcagaaatg 49
||||||||||| |||||||| |||||||||| ||||||
Sbjct: 3 agtactccctctgtcccgaaatacttgtcgcggaaatg 40
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 93.7 bits (47), Expect = 6e-19
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 12 agtactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctaga 71
|||||||||||||||| ||| |||||||| ||||||||||| | |||||||||||||| |
Sbjct: 3 agtactccctccgtccggaaatacttgtcccagaaatgaat-ataatggatgtatctata 61
Query: 72 actaaaatacgtctagata 90
||||||||| |||||||||
Sbjct: 62 actaaaataagtctagata 80
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 53 aaaaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaa 112
|||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||
Sbjct: 34 aaaaatggatgtatctagaactaaaatatgtctagatacatccattttttcgacaagtaa 93
Query: 113 tttcggacggagggagta 130
|| | ||||||||||||
Sbjct: 94 ttcagaacggagggagta 111
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 91.7 bits (46), Expect = 2e-18
Identities = 101/118 (85%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 13 gtactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaa 72
||||||||||||||| || |||||||| |||||||||| ||||| |||||||||| ||
Sbjct: 4 gtactccctccgtccgcaaatacttgtcctagaaatgaat-aaaattgatgtatctataa 62
Query: 73 ctaaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
|||||||| ||||| ||||| ||||||| | |||||| |||| |||||||||||||
Sbjct: 63 ctaaaataagtctacatacaaccatttctagggcaagtattttcagacggagggagta 120
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 55 aaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaatt 114
|||||||| |||||| ||||||||||| |||||||||| ||||||| ||||| |||||||
Sbjct: 80 aaatggatatatctaaaactaaaatacatctagatacatccatttctgcgacgagtaatt 21
Query: 115 tcggacggagggagtagtag 134
| ||||||||||||||||
Sbjct: 20 cagaacggagggagtagtag 1
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatg 49
|||||||||||| | |||||||| ||||||||||||
Sbjct: 5 tactccctccgttctgaattactcgtcgcagaaatg 40
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 45 aaatgaataaaaatggatgtatctagaactaaaatacgtctagatacacccatttc 100
||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 90 aaatggataaaaatggatgtatctagaagtaaaatacgtctagatacatccatttc 35
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 85.7 bits (43), Expect = 1e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 57 atggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaatttc 116
||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |
Sbjct: 38 atggatgtatctagaactaaaatacatctagatacattcatttctgcgacaagtaattcc 97
Query: 117 ggacggagggagtag 131
||||| |||||||
Sbjct: 98 aaacggatggagtag 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 83 tctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
|||||||||| |||| |||| ||||||||||| || | ||||||||||
Sbjct: 52 tctagatacatccatatccgagacaagtaattccgaatggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 29 gaattacttgtcgcagaaatgaat 52
||||||||||||||||||||||||
Sbjct: 96 gaattacttgtcgcagaaatgaat 73
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 15 actccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaact 74
||||||||||| | ||| ||||||||| ||||||| ||||||| ||||||||||||||
Sbjct: 1 actccctccgttcggaaatacttgtcggagaaatgcctaaaaataaatgtatctagaact 60
Query: 75 aaaatacgtctagataca 92
||||||| ||||||||||
Sbjct: 61 aaaatacatctagataca 78
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 83.8 bits (42), Expect = 6e-16
Identities = 100/118 (84%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| ||| |||||||| ||||||||||| || | |||||||||| |||
Sbjct: 5 tactccctccgtccagaaatacttgtcctagaaatgaatataa-tagatgtatctataac 63
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagtag 131
||||||| ||||||||||| ||||| |||||||| || || |||||||||||||
Sbjct: 64 taaaataagtctagatacattcatttttaggacaagtatttccgaacggagggagtag 121
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 55 aaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaatt 114
|||||||||||||||||||| ||| | ||||||||||| ||||||| ||||||||||||
Sbjct: 80 aaatggatgtatctagaactgaaaaatgtctagatacatccatttctacgacaagtaatt 21
Query: 115 tcggacggaggga 127
|| |||||||||
Sbjct: 20 ccgaacggaggga 8
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 54 aaaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaat 113
|||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||
Sbjct: 89 aaaatgaatgtatctagaactaaaactcgtctagatacatccatttctgcgacaagtaat 30
Query: 114 t 114
|
Sbjct: 29 t 29
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 81.8 bits (41), Expect = 2e-15
Identities = 98/117 (83%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| |||||||||||| | ||||| | | ||||| |||||| ||||||
Sbjct: 121 tactccctccgtccggaattacttgtcaccaaaatggaaataaatgaatgtatttagaac 62
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
||||||| || ||||| || |||||| | ||||||||| |||||||||||||||
Sbjct: 61 taaaatatgtttagatgcatccatttttatgtcaagtaattccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 104 gacaagtaatttcggacggagggagta 130
||||||||||| |||||||||||||||
Sbjct: 95 gacaagtaattccggacggagggagta 121
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 51 ataaaaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagt 110
||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| |||
Sbjct: 32 ataaaaatggatgtatctataactaaaatacatctagatacattcatttcttggacgagt 91
Query: 111 aatttcggacggagggagtag 131
||||||| || ||||||||||
Sbjct: 92 aatttcgaacagagggagtag 112
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum
(bread wheat)
Length = 124
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 33 tacttgtcgcagaaatgaataaaaatggatgtatctagaactaaaatacgtctagataca 92
||||||||| ||||| | |||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 24 tacttgtcggagaaacggataaaaatggatgtatgtagaactaaaatacgtctaaataca 83
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 79.8 bits (40), Expect = 9e-15
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 55 aaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaatt 114
||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||
Sbjct: 36 aaatggatgtatctagaactaaaatacatctagatacatccatacgtgcgacaagtaatt 95
Query: 115 tcggacggagggagta 130
| ||||||||||||
Sbjct: 96 cggaacggagggagta 111
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 11 tagtactccctccgtcccgaattacttgtcgca 43
||||||||||||||| |||||||||||||||||
Sbjct: 114 tagtactccctccgttccgaattacttgtcgca 82
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 77.8 bits (39), Expect = 4e-14
Identities = 96/115 (83%)
Strand = Plus / Plus
Query: 17 tccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaactaa 76
||||||||| | ||||||| ||| || ||||| ||||||||||||||||||| || |||
Sbjct: 8 tccctccgttcgaaattactcgtcacaaaaatggataaaaatggatgtatctacaattaa 67
Query: 77 aatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagtag 131
||||| |||||||||| |||||| ||| ||||||| | |||||||||||||
Sbjct: 68 aatacatctagatacattcatttcttggacgagtaattctgaacggagggagtag 122
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 75.8 bits (38), Expect = 1e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 55 aaatggatgtatctagaactaaaa-tacgtctagatacacccatttccgcgacaagtaat 113
|||||||||||||||||||||||| | |||||||||||| |||||| ||| ||||||||
Sbjct: 37 aaatggatgtatctagaactaaaaatgcgtctagatacatccatttttgcggcaagtaat 96
Query: 114 ttcggacggaggga 127
| ||||| ||||||
Sbjct: 97 tccggacagaggga 110
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 75.8 bits (38), Expect = 1e-13
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 11 tagtactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctag 70
||||||||||||||||| ||| |||||||| | ||||| |||||| ||||||||||||
Sbjct: 123 tagtactccctccgtccggaaatacttgtcataaaaatgtataaaa-tggatgtatctat 65
Query: 71 aactaaaatacgtctagataca 92
|| ||||||| |||||||||||
Sbjct: 64 aagtaaaataagtctagataca 43
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 73.8 bits (37), Expect = 6e-13
Identities = 98/117 (83%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| ||| |||||||| | ||||| ||| | |||||||||||| |||
Sbjct: 5 tactccctccgtccggaaatacttgtcctaaaaatggatatat-tggatgtatctataac 63
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
||||||| ||||||||||| ||| || |||||||| || |||||||||||||||
Sbjct: 64 taaaataagtctagatacattcatctctaggacaagtatttccggacggagggagta 120
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 73.8 bits (37), Expect = 6e-13
Identities = 101/121 (83%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 13 gtactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaa 72
||||||||||||||| ||| |||||| | | |||| |||| || |||||||||||| ||
Sbjct: 121 gtactccctccgtccggaaatacttgacctaaaaataaatataa-tggatgtatctataa 63
Query: 73 ctaaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagtagt 132
|||||||| |||||||| || |||||| |||||||| ||| |||||||||||||||
Sbjct: 62 ctaaaataagtctagattcatccatttttaggacaagtatttttagacggagggagtagt 3
Query: 133 a 133
|
Sbjct: 2 a 2
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 54 aaaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaat 113
|||||||||||||||||||||||||||| ||| |||||| |||| ||||||||||||
Sbjct: 35 aaaatggatgtatctagaactaaaatacatcttgatacatccataagtgcgacaagtaat 94
Query: 114 ttcggacggagggagtagta 133
| | |||||||| ||||||
Sbjct: 95 tcggaacggagggcgtagta 114
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 ccctccgtcccgaattacttgtcgca 43
|||||||| |||||||||||||||||
Sbjct: 107 ccctccgttccgaattacttgtcgca 82
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 55 aaatggatgtatctagaactaaaatacgtctagatacacccat 97
||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 79 aaatggatgtatctagaactaaaatacatctagatacatccat 37
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 83 tctagatacacccatttccgcgacaagtaatttcggacggagggagtag 131
|||||||||| ||||||| ||||| |||||||| | |||||||||||||
Sbjct: 63 tctagatacatccatttcagcgacgagtaatttggaacggagggagtag 111
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 11 tagtactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctag 70
||||||||||||||||| || |||||||| ||||| | ||||| |||||||| |||
Sbjct: 2 tagtactccctccgtccgaaaatacttgtcatcaaaatggacaaaaagggatgtatttag 61
Query: 71 aactaaaatacgtctagataca 92
||||||||||| ||||||||||
Sbjct: 62 aactaaaatacatctagataca 83
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 13 gtactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctaga 71
||||||||||||||| ||| |||||||| |||||||||||| |||||||||||||
Sbjct: 132 gtactccctccgtccggaaatacttgtcatcaaaatgaataaaaggggatgtatctaga 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 104 gacaagtaatttcggacggagggagta 130
|||||||| ||||||||||||||||||
Sbjct: 31 gacaagtattttcggacggagggagta 5
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 55 aaatggatgtatctagaactaaaatacgtctagatacacccattt 99
||||||||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 80 aaatggatgtatctataactaaaatacatctagatacatccattt 36
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 85 tagatacacccatttccgcgacaagtaatttcggacggagggagta 130
|||||||| ||||||| ||||| |||||||| | ||||||||||||
Sbjct: 66 tagatacatccatttctgcgacgagtaatttggaacggagggagta 111
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 97/117 (82%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| ||| ||||||| | | ||||| ||||||||| |||| | || |||
Sbjct: 120 tactccctccgtccggaaatacttgtggga-aaatggataaaaatgaatgtgtataaaac 62
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
|||| |||||||||| || ||||||| ||||||||| || | |||||||| ||||
Sbjct: 61 taaagcacgtctagatgcatccatttctccgacaagtatttccagacggaggaagta 5
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 63.9 bits (32), Expect = 5e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 55 aaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaatt 114
||||||| |||| |||||||||||||| |||||||| | | |||| |||||||| |||||
Sbjct: 36 aaatggacgtatttagaactaaaatacatctagatatatctattttcgcgacaattaatt 95
Query: 115 tcggacggaggg 126
|| ||||||||
Sbjct: 96 ccgaacggaggg 107
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| || |||||||| || ||| |||||| ||||||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaagtgactaaaaagagatgtatctagaac 72
Query: 74 taaaatacgtctagataca 92
||||||| |||||||||||
Sbjct: 71 taaaatatgtctagataca 53
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 104 gacaagtaatttcggacggagggagta 130
|||||||| ||||||||||||||||||
Sbjct: 105 gacaagtattttcggacggagggagta 131
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctaga 71
|||||||||||||| ||| |||||||| ||||| |||||| |||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcatcaaaatggataaaaggggatgtatctaga 62
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 55 aaatggatgtatctagaactaaaatacgtctagataca 92
|||||||||||||||| ||| |||||||||||||||||
Sbjct: 36 aaatggatgtatctagcactgaaatacgtctagataca 73
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 55 aaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgac 106
||||| ||||||||||||||||||||| ||||||||| | ||||| |||||
Sbjct: 80 aaatgaatgtatctagaactaaaatacaactagatacatctatttctgcgac 29
>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
Length = 147
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 13 gtactccctccgtcccgaattacttgtcgcag 44
||||||||||||| ||||||||||||||||||
Sbjct: 144 gtactccctccgttccgaattacttgtcgcag 113
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaata 53
|||||||| ||| |||||||||||||| |||| |||||||
Sbjct: 5 tactcccttcgttccgaattacttgtcacagatatgaata 44
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 69/80 (86%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcg-cagaaatgaataaaaatggatgtatctagaa 72
|||||||||||||| ||| || ||||| ||||| || ||||||| | |||||||||||
Sbjct: 5 tactccctccgtccggaaatatttgtcatcagaa-tggataaaaagtggtgtatctagaa 63
Query: 73 ctaaaatacgtctagataca 92
||||||||| ||||||||||
Sbjct: 64 ctaaaatacatctagataca 83
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctaga 71
|||||||||||||| ||| |||||||| | |||||||||| |||||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtcatcaagatgaataaaaggggatgtatctaga 74
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 13 gtactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaa 72
||||||||||||||| || |||||||| ||||||| ||||| ||| |||||||||
Sbjct: 131 gtactccctccgtccgaaaatacttgtcatcaaaatgaacaaaaagagatatatctagaa 72
Query: 73 ctaaaatacgtctagataca 92
||||||||| |||| |||||
Sbjct: 71 ctaaaatacatctaaataca 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 104 gacaagtaatttcggacggagggagta 130
|||||||| ||||||||||||||||||
Sbjct: 104 gacaagtattttcggacggagggagta 130
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 45 aaatgaataaaaatggatgtatctagaactaaaatacgtctagataca 92
||||| ||||||| | |||||||||||| |||||||| ||||||||||
Sbjct: 36 aaatggataaaaaagaatgtatctagaattaaaatacatctagataca 83
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 61 atgtatctagaactaaaatacgtctagataca 92
||||||||||||||||||||| ||||||||||
Sbjct: 52 atgtatctagaactaaaatacatctagataca 83
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 54.0 bits (27), Expect = 5e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| || |||||||| | ||||| ||||| ||||||| ||||||
Sbjct: 142 tactccctccgtccgaaaatacttgtcatcaatatgaacaaaaagagatgtatgtagaac 83
Query: 74 taaaatacgtctagataca 92
|||||||| ||||||||||
Sbjct: 82 taaaatacatctagataca 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 104 gacaagtaatttcggacggagggagta 130
|||||||| ||||||||||||||||||
Sbjct: 116 gacaagtattttcggacggagggagta 142
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 52.0 bits (26), Expect = 2e-06
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 52 taaaaatggatgtatctaga-actaaaatacgtctagataca 92
|||||||||| ||||||| | |||||||||||||||||||||
Sbjct: 84 taaaaatggacgtatctatatactaaaatacgtctagataca 43
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 45 aaatgaataaaaatggatgtatctagaactaaaatacgtctagataca 92
||||| ||||||| |||||| ||||||||||||||| |||| |||||
Sbjct: 36 aaatggataaaaaatgatgtacctagaactaaaatacatctatataca 83
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 45 aaatgaataaaaatggatgtatctagaactaaaatacgtctagataca 92
||||| ||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 36 aaatggataaaaagagatgtacctagaactaaaatatatctagataca 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 104 gacaagtaatttcggacggagggagta 130
|||||||| ||||||||||||||||||
Sbjct: 105 gacaagtattttcggacggagggagta 131
>RF00906;MIR1122;FJ427399.1/11963-11864 4571:Triticum turgidum
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 104 gacaagtaatttcggacggagggagta 130
|||||||| ||||||||||||||||||
Sbjct: 31 gacaagtattttcggacggagggagta 5
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtc 40
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgttccgaattacttgtc 31
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| || || ||||| ||||| ||||||| |||| |||||| |||
Sbjct: 131 tactccctccgtccaaaaataattgtcatcaaaatggataaaaaaggatatatctaaaac 72
Query: 74 taaaatacgtctagataca 92
||| |||| ||||||||||
Sbjct: 71 taatatacatctagataca 53
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| || |||||||| ||||| |||||||| |||||| ||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaaatggataaaaataaatgtatttagaac 72
Query: 74 taaaata 80
|||||||
Sbjct: 71 taaaata 65
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 104 gacaagtaatttcggacggagggagta 130
|||||||| ||||||||||||||||||
Sbjct: 105 gacaagtattttcggacggagggagta 131
>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 60 gatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaatttcgga 119
||||||| || |||||||||| ||||||||||| |||||| |||| ||| || ||||
Sbjct: 49 gatgtatgtataactaaaataagtctagatacattcatttcgaagacaggtatttccgga 108
Query: 120 cggagggagta 130
||| |||||||
Sbjct: 109 cggggggagta 119
>RF00906;MIR1122;AK248306.1/5271-5157 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 83 tctagatacacccatttccgcgacaagtaatttcggacggagggagtagta 133
||||||||||| |||||| |||||| |||||| || | ||||| |||||||
Sbjct: 52 tctagatacactcatttcagcgacaggtaattccgaatggaggcagtagta 2
>RF00906;MIR1122;AF254799.1/60623-60744 4513:Hordeum vulgare
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 54 aaaatggatgtatctagaactaaaatacgtctaga 88
|||||||||||||| |||||||||||| |||||||
Sbjct: 35 aaaatggatgtatc-agaactaaaatatgtctaga 68
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 55 aaatggatgtatctagaactaaaatacgtctagataca 92
||||| |||||||||||| ||||||| ||||||||||
Sbjct: 36 aaatgaatgtatctagaattaaaataaatctagataca 73
>RF00906;MIR1122;EU282716.1/1526-1412 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 115
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 59 ggatgtatctagaactaaaatacgtctagataca 92
|||||||| ||| ||| |||||||||||||||||
Sbjct: 76 ggatgtatttagcactgaaatacgtctagataca 43
>RF00906;MIR1122;AK288546.1/1340-1246 39947:Oryza sativa Japonica
Group
Length = 95
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ctagtactccctccgtcccgaa 31
||||||||||||||||||||||
Sbjct: 1 ctagtactccctccgtcccgaa 22
