miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 113 bits (57), Expect = 4e-25
Identities = 74/79 (93%), Gaps = 3/79 (3%)
Strand = Plus / Minus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcactat---ctaaacgctcttata 66
||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcactatgatctaaacgctcttata 24
Query: 67 tttctttacagagggagta 85
|||||||||||||||||||
Sbjct: 23 tttctttacagagggagta 5
Score = 105 bits (53), Expect = 1e-22
Identities = 76/83 (91%), Gaps = 3/83 (3%)
Strand = Plus / Plus
Query: 8 tatactccctccgtaaagaaatataagatcgtttagatcact---atctaaacgctctta 64
||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 3 tatactccctctgtaaagaaatataagagcgtttagatcatagtgatctaaacgctctta 62
Query: 65 tatttctttacagagggagtact 87
|||||||||||||||||||||||
Sbjct: 63 tatttctttacagagggagtact 85
>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 82
Score = 101 bits (51), Expect = 1e-21
Identities = 69/74 (93%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 12 ctccctccgtaaagaaatataagatcgtttagatcactatctaaacgctcttatatttct 71
||||||| |||||||||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 76 ctccctctgtaaagaaatataagatcatttagatcacta--taaacgatcttatatttct 19
Query: 72 ttacagagggagta 85
||||||||||||||
Sbjct: 18 ttacagagggagta 5
Score = 71.9 bits (36), Expect = 1e-12
Identities = 66/75 (88%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 9 atactccctccgtaaagaaatataagatcgtttagatcactatctaaacgctcttatatt 68
|||||||||| |||||||||||||||||||||| || ||||||| | |||||||||
Sbjct: 4 atactccctctgtaaagaaatataagatcgttt--atagtgatctaaatgatcttatatt 61
Query: 69 tctttacagagggag 83
|||||||||||||||
Sbjct: 62 tctttacagagggag 76
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 77.8 bits (39), Expect = 2e-14
Identities = 74/87 (85%), Gaps = 9/87 (10%)
Strand = Plus / Minus
Query: 8 tatactccctccgtaaagaaatataagatcgtttagatcacta---------tctaaacg 58
||||| ||||| |||||||||||||||| |||||||||||||| ||||||||
Sbjct: 91 tatacaccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacg 32
Query: 59 ctcttatatttctttacagagggagta 85
|||||||||||||||||||||| ||||
Sbjct: 31 ctcttatatttctttacagaggtagta 5
Score = 73.8 bits (37), Expect = 3e-13
Identities = 69/81 (85%), Gaps = 9/81 (11%)
Strand = Plus / Plus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcact---------atctaaacgct 60
|||| |||| |||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 5 tactacctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgct 64
Query: 61 cttatatttctttacagaggg 81
|||||||||||||||||||||
Sbjct: 65 cttatatttctttacagaggg 85
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 75.8 bits (38), Expect = 9e-14
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 9 atactccctccgtaaagaaatataagatcgtttagatcacta 50
|||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4 atactccctctgtaaagaaatataagatcgtttagatcacta 45
Score = 63.9 bits (32), Expect = 3e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 50 atctaaacgctcttatatttctttacagagggagta 85
||||||||| ||||||||||||||||||||||||||
Sbjct: 40 atctaaacgatcttatatttctttacagagggagta 5
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcacta 50
|||||||||| |||||||||||||||| ||||||||||||
Sbjct: 95 tactccctccacaaagaaatataagatcatttagatcacta 55
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 73.8 bits (37), Expect = 3e-13
Identities = 72/85 (84%), Gaps = 9/85 (10%)
Strand = Plus / Minus
Query: 13 tccctccgtaaagaaatataagatcgtttagatcactat---------ctaaacgctctt 63
|||||| |||||||||||||||| ||||||||||||||| |||||||| |||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 64 atatttctttacagagggagtacta 88
|||||| ||||||||||||||||||
Sbjct: 26 atatttgtttacagagggagtacta 2
Score = 60.0 bits (30), Expect = 5e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 50 atctaaacgctcttatatttctttacagagggagtact 87
|||||||||||||||||||||||||| |||||| ||||
Sbjct: 54 atctaaacgctcttatatttctttactgagggactact 91
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 67.9 bits (34), Expect = 2e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 9 atactccctccgtaaagaaatataagatcgtttagatcacta 50
||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 4 atactccctccgtaaagaaatataagagcgtttaggtcacta 45
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 52 ctaaacgctcttatatttctttacagagggagta 85
|||||||||||||||||||||||| |||||||||
Sbjct: 38 ctaaacgctcttatatttctttacggagggagta 5
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 67.9 bits (34), Expect = 2e-11
Identities = 72/86 (83%), Gaps = 9/86 (10%)
Strand = Plus / Plus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcacta---------tctaaacgct 60
||||||||| |||||||||||||||| |||||||| ||||| |||||| |||
Sbjct: 5 tactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatgct 64
Query: 61 cttatatttctttacagagggagtac 86
|||||||||||||| |||||||||||
Sbjct: 65 cttatatttctttatagagggagtac 90
Score = 65.9 bits (33), Expect = 8e-11
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 51 tctaaacgctcttatatttctttacagagggagtact 87
||||||||||||||||||||||||| |||||||||||
Sbjct: 39 tctaaacgctcttatatttctttaccgagggagtact 3
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 67.9 bits (34), Expect = 2e-11
Identities = 72/86 (83%), Gaps = 9/86 (10%)
Strand = Plus / Minus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcacta---------tctaaacgct 60
|||||||||||||||||||||||||| |||||||| |||| |||| |||||
Sbjct: 89 tactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgct 30
Query: 61 cttatatttctttacagagggagtac 86
|||||||||||||||||| |||||||
Sbjct: 29 cttatatttctttacagaaggagtac 4
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 49 tatctaaacgctcttatatttctttacagagggagta 85
||||||||| ||||||||||||||||| |||||||||
Sbjct: 53 tatctaaacactcttatatttctttacggagggagta 89
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 65.9 bits (33), Expect = 8e-11
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcacta 50
|||||||||||||||||||||||||| | ||||||||||||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcacta 49
Score = 56.0 bits (28), Expect = 8e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 50 atctaaacgctcttatatttctttacagagggagta 85
||||||| |||||||||||||||||| |||||||||
Sbjct: 54 atctaaatgctcttatatttctttacggagggagta 89
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 65.9 bits (33), Expect = 8e-11
Identities = 71/85 (83%), Gaps = 9/85 (10%)
Strand = Plus / Plus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcac---------tatctaaacgct 60
||||||||||||| |||||||||||| ||||||||||| |||||||| | |
Sbjct: 5 tactccctccgtacagaaatataagaatgtttagatcactaaagtagttatctaaatgat 64
Query: 61 cttatatttctttacagagggagta 85
|||||||||||||||||||||||||
Sbjct: 65 cttatatttctttacagagggagta 89
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcacta 50
||||||||| |||||||||||||||||| ||||||| ||||
Sbjct: 89 tactccctctgtaaagaaatataagatcatttagataacta 49
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 65.9 bits (33), Expect = 8e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 50 atctaaacgctcttatatttctttacagagggagtac 86
|||||||| ||||||||||||||||||||||||||||
Sbjct: 52 atctaaacactcttatatttctttacagagggagtac 88
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcacta 50
||||||||| |||||||||||||||| |||||||||||||
Sbjct: 87 tactccctctgtaaagaaatataagagtgtttagatcacta 47
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 50 atctaaacgctcttatatttctttacagagggagtacta 88
||||||||||||||||||| ||||||||||||||||||
Sbjct: 40 atctaaacgctcttatattagtttacagagggagtacta 2
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcactat 51
||||||||| ||||| ||||||||| |||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactat 46
>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
subsp. dicoccoides
Length = 96
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 17 tccgtaaagaaatataagatcgtttagatcacta 50
||||||||||||||||||| ||||||||||||||
Sbjct: 12 tccgtaaagaaatataagaacgtttagatcacta 45
Score = 54.0 bits (27), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 8 tatactccctccgtaaagaaatataagatcgtttagatcacta 50
|||||||| |||||||||||||| |||| ||| ||||||||||
Sbjct: 94 tatactccatccgtaaagaaatacaagagcgtctagatcacta 52
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 50 atctaaacgctcttatatttctttac 75
||||||||| ||||||||||||||||
Sbjct: 40 atctaaacgttcttatatttctttac 15
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 49 tatctaaacgctcttatatttctttacagagggagtactat 89
||||||||| |||||||||| |||||||||||||||||||
Sbjct: 41 tatctaaacactcttatattagtttacagagggagtactat 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 51 tctaaacgctcttatatttctttacagagggagtacta 88
|||||||||| ||||||| ||||| ||||||||||||
Sbjct: 53 tctaaacgctattatattagtttacggagggagtacta 90
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 56.0 bits (28), Expect = 8e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 50 atctaaacgctcttatatttctttacagagggagta 85
||||||||||||||||||| |||||||||||||||
Sbjct: 40 atctaaacgctcttatattagtttacagagggagta 5
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 56.0 bits (28), Expect = 8e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 50 atctaaacgctcttatatttctttacagagggagta 85
||||||||||||||||||| |||||||||||||||
Sbjct: 40 atctaaacgctcttatattagtttacagagggagta 5
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 9 atactccctccgtaaagaaatataagatcgtttagatcacta 50
|||||||||| ||||| ||||||||| ||||||||||||||
Sbjct: 4 atactccctctgtaaactaatataagagcgtttagatcacta 45
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 56.0 bits (28), Expect = 8e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 52 ctaaacgctcttatatttctttacagagggagtact 87
||||||||||||||||| |||||||||||||||||
Sbjct: 38 ctaaacgctcttatattagtttacagagggagtact 3
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 9 atactccctccgtaaagaaatataagatcgtttagatca 47
|||||||||||||||| ||||||||| | |||||||||
Sbjct: 135 atactccctccgtaaactaatataagagcatttagatca 97
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 50 atctaaacgctcttatatttctttacagagggagtacta 88
||||||| ||||||||||| ||||||||||||||||||
Sbjct: 53 atctaaatgctcttatattagtttacagagggagtacta 91
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcactat 51
||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactat 46
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 54 aaacgctcttatatttctttacagagggagtact 87
||||||||||||||| |||||||||||||||||
Sbjct: 65 aaacgctcttatattagtttacagagggagtact 98
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 52 ctaaacgctcttatatttctttacagagggagtactat 89
||||||||||||||||| ||||| |||||||||||||
Sbjct: 38 ctaaacgctcttatattagtttacggagggagtactat 1
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcacta 50
||||||||||||||| ||||||||| ||||||| ||||||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcacta 45
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcactat 51
||||||||| ||||| ||||||||| |||||||||||||||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactat 48
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 50 atctaaacgctcttatatttctttacagagggagta 85
||||||||| ||||||||| |||||||||||||||
Sbjct: 54 atctaaacgttcttatattagtttacagagggagta 89
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 50 atctaaacgctcttatatttctttacagagggagtact 87
|||||||| |||||||||| |||||||||||||||||
Sbjct: 40 atctaaacactcttatattagtttacagagggagtact 3
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcactat 51
||||||||||||||| ||||||||| |||||||| ||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactat 48
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 51 tctaaacgctcttatatttctttacagagggagta 85
|||||||||||||||||| ||||| |||||||||
Sbjct: 55 tctaaacgctcttatattagtttacggagggagta 89
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcactat 51
||||||||||||||| ||||||||| ||||||||| |||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactat 48
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 50 atctaaacgctcttatatttctttacagagggagta 85
||||||||||||||||||| ||||| |||||||||
Sbjct: 54 atctaaacgctcttatattagtttacggagggagta 89
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 50 atctaaacgctcttatatttctttacagagggagtact 87
||||||| ||||||||||| |||||||||||||||||
Sbjct: 40 atctaaaagctcttatattagtttacagagggagtact 3
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 50 atctaaacgctcttatatttctttacagag 79
|||||||||||||||||||| |||||||||
Sbjct: 40 atctaaacgctcttatatttgtttacagag 11
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 20 gtaaagaaatataagatcgtttagatcacta 50
||||| |||||||||| ||||||||||||||
Sbjct: 15 gtaaacaaatataagagcgtttagatcacta 45
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 51 tctaaacgctcttatatttctttacagagggagtacta 88
|||||||||||||||||| ||||| ||||||||||||
Sbjct: 53 tctaaacgctcttatattagtttacggagggagtacta 90
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 49 tatctaaacgctcttatatttctttacagagggagtactat 89
||||||||| || ||||||| |||||||||||||||||||
Sbjct: 41 tatctaaacacttttatattagtttacagagggagtactat 1
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 10 tactccctccgtaaagaaatataagatcgtttaga 44
||||||||||||||| ||||||||| ||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga 53
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 9 atactccctccgtaaagaaatataagatcgtttagatcacta 50
|||||||||||||||| ||||||||| ||||||||| ||||
Sbjct: 4 atactccctccgtaaattaatataagagcgtttagattacta 45
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 50 atctaaacgctcttatatttctttacagagggagta 85
||||||||||||||||||| ||||| |||||||||
Sbjct: 40 atctaaacgctcttatattaatttacggagggagta 5
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcacta 50
||||||||||||||| ||||||||| | ||||||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcacta 47
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 15 cctccgtaaagaaatataagatcgtttagatcactat 51
|||||||||| ||||||||| |||||||||||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactat 48
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 54 aaacgctcttatatttctttacagagggagta 85
||||||||||||||| |||||||||||||||
Sbjct: 36 aaacgctcttatattaatttacagagggagta 5
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 11 actccctccgtaaagaaatataagatcgtttagatcacta 50
|||||||| ||||| ||||||||| ||||||||||||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcacta 49
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 50 atctaaacgctcttatatttctttacagagggagt 84
||||||||||||||||||| ||||| ||||||||
Sbjct: 54 atctaaacgctcttatattagtttactgagggagt 88
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 10 tactccctccgtaaagaaatataagatcgtttagatcactat 51
||||||||||||||| ||||||||| |||| |||||||||
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactat 46
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 50 atctaaacgctcttatatttctttacagagggagta 85
|||||| |||||||||||| |||||||||||||||
Sbjct: 40 atctaagcgctcttatattagtttacagagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 50 atctaaacgctcttatatttctttacagagggagta 85
|||||| |||||||||||| |||||||||||||||
Sbjct: 54 atctaagcgctcttatattagtttacagagggagta 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 9 atactccctccgtaaagaaatataagatcgtttagatcacta 50
|||||||||| ||||| ||||||||| || |||||||||||
Sbjct: 4 atactccctctgtaaactaatataagagcgcttagatcacta 45
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 50 atctaaacgctcttatatttctttacagagggagta 85
||||||||||||| |||||| || ||||||||||||
Sbjct: 40 atctaaacgctctcatatttattcacagagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 50 atctaaacgctcttatatttctttacagagggagta 85
||||||||||||||||||| |||||| ||||||||
Sbjct: 57 atctaaacgctcttatattattttacatagggagta 92
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 9 atactccctccgtaaagaaatataagatcgtttagatcacta 50
|||||||||| || || |||||| ||| ||||||||||||||
Sbjct: 4 atactccctctgtgaataaatatgagagcgtttagatcacta 45
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 actccctccgtaaagaaatataagatcgtttagatcac 48
|||||||||||||| ||||||||| |||||||||||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcac 51
