miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 204 bits (103), Expect = 2e-52
Identities = 115/119 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
|||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 121 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 62
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagtact 133
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 taaaatacatctagatacatccattcccccgacaagtatttccggacggagggagtact 3
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggat 53
||||||||||||||| ||||||||||||| | |||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgggggaatggat 43
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 200 bits (101), Expect = 4e-51
Identities = 113/117 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
|||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 64
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatccattcccccgacaagtatttccggacggagggagta 121
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggat 53
||||||||||||||| ||||||||||||| | |||||||
Sbjct: 121 tactccctccgtccggaaatacttgtcgggggaatggat 83
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 178 bits (90), Expect = 1e-44
Identities = 111/118 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtcctgaaatacttgtcggagaaatgcataaaaatggatgtatctagaac 64
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagtac 132
|||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 65 taaaatacgtctaggtacatccattcctctgacaagtatttccggacagagggagtac 122
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 96 cattcctccgacaagtatttccggacggagggagta 131
|||| |||||||||||||||| ||||||||||||||
Sbjct: 40 catttctccgacaagtatttcaggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggat 53
||||||||| ||||| ||||||||||| ||| |||||||
Sbjct: 121 tactccctctgtccggaaatacttgtcagaggaatggat 83
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 174 bits (88), Expect = 2e-43
Identities = 113/120 (94%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgcagaaatggatataaatggatgtatctagaac 64
Query: 75 taaaatacatc-tagatacatccattcctccgacaagtatttccggacggagggagtact 133
||||||||||| | |||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 65 taaaatacatctttgatacatccattcctcggacaagtattttcggacggagggagtact 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 93 atccattcctccgacaagtatttccggacggagggagtact 133
||||||| || ||||||||||||||||||||||||||||||
Sbjct: 43 atccatttctgcgacaagtatttccggacggagggagtact 3
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggat 53
||||||||||||||||||||||||||| ||| |||||||
Sbjct: 122 tactccctccgtccgaaaatacttgtccgaggaatggat 84
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 167 bits (84), Expect = 5e-41
Identities = 111/120 (92%)
Strand = Plus / Plus
Query: 12 tactactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctag 71
|||||||||||| ||||| || ||||||||| | ||||||||||||||||||||||||||
Sbjct: 2 tactactccctctgtccggaattacttgtcgcataaatggataaaaatggatgtatctag 61
Query: 72 aactaaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
|| ||||||||||||||||| || |||| |||||||||||||||||||||||||||||||
Sbjct: 62 aattaaaatacatctagatagattcatttctccgacaagtatttccggacggagggagta 121
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatg 50
||||||||||||||| ||||||||||||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtcggagaaatg 86
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 161 bits (81), Expect = 3e-39
Identities = 108/117 (92%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||| || ||||||| | |||||||||||||||||||||||||||||||
Sbjct: 121 tactccctccgtccggaactacttgttgcagaaatggataaaaatggatgtatctagaac 62
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
|||||||| |||||||||||||||| ||||||||| || || |||||||||||||||
Sbjct: 61 taaaatacgtctagatacatccatttctccgacaaataatttcggacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggat 53
|||||||||||||||||| || |||||||||||||||||
Sbjct: 5 tactccctccgtccgaaattatttgtcggagaaatggat 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 93 atccattcctccgacaagtatttccggacggagggagta 131
||||||| || | ||||||| ||||||||||||||||||
Sbjct: 83 atccatttctgcaacaagtagttccggacggagggagta 121
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 153 bits (77), Expect = 8e-37
Identities = 107/117 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||| || |||||||| | |||||||||||||||||| ||||||||||
Sbjct: 121 tactccctccgtccggaattacttgtcacacaaatggataaaaatggatatatctagaac 62
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
|||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 61 taaaatacatctagatacatccattcctatgacaaatatttccggacagagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 105 gacaagtatttccggacggagggagta 131
|||||||| ||||||||||||||||||
Sbjct: 95 gacaagtaattccggacggagggagta 121
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 151 bits (76), Expect = 3e-36
Identities = 106/116 (91%)
Strand = Plus / Minus
Query: 16 actccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaact 75
|||||||| |||| || ||||||||| | |||| |||||||||||||||||||||||||
Sbjct: 120 actccctctgtccagaattacttgtcgcataaattgataaaaatggatgtatctagaact 61
Query: 76 aaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 60 aaaatacatctagatacatccattcctatgacaagtatttccggacggcgggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 ttactactccctccgtccgaaaatacttgtc 41
||||||||||| ||||||| |||||||||||
Sbjct: 1 ttactactcccgccgtccggaaatacttgtc 31
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 133 bits (67), Expect = 7e-31
Identities = 103/115 (89%)
Strand = Plus / Plus
Query: 16 actccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaact 75
||||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 1 actccctccgttcggaaatacttgtcggagaaatgcctaaaaataaatgtatctagaact 60
Query: 76 aaaatacatctagatacatccattcctccgacaagtatttccggacggagggagt 130
||||||||||||||||||| |||| |||||| ||||||| | ||||||||||||
Sbjct: 61 aaaatacatctagatacattaattcttccgacgagtattttcagacggagggagt 115
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 96 cattcctccgacaagtatttccggacggagggagt 130
|||| |||||||||||||||||| |||||||||||
Sbjct: 35 catttctccgacaagtatttccgaacggagggagt 1
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 131 bits (66), Expect = 3e-30
Identities = 106/118 (89%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
|||||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 120 tactccctccatccaaaaatacttgttgga-aaatggataaaaatggatgtatctagaag 62
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagtac 132
|||||||| |||||||||||||||| ||| ||||||||| |||| ||| ||| |||||
Sbjct: 61 taaaatacgtctagatacatccatttctctgacaagtatatccgaacgtaggcagtac 4
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 129 bits (65), Expect = 1e-29
Identities = 104/117 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
|||||||||| | || || ||||||||| | ||||| ||| ||||||||||||||| |||
Sbjct: 121 tactccctccatgcggaattacttgtcgcaaaaatgaatagaaatggatgtatctataac 62
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
|||||||||||||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 61 taaaatacatctagatacatccattctttggacaagtatttccggacgaagggagta 5
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 129 bits (65), Expect = 1e-29
Identities = 104/117 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||| || ||||||||| ||||||| | |||||||||||||||||||
Sbjct: 5 tactccctccgtccggaagtacttgtcgtcaaaatggaaagaaatggatgtatctagaac 64
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
|||||||| |||||||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 65 taaaatacgtctagatacatccatttctatgacaaataattccggacggagggagta 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 104 cgacaagtatttccggacggagggagta 131
||||||||| ||||||||||||||||||
Sbjct: 32 cgacaagtacttccggacggagggagta 5
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 121 bits (61), Expect = 3e-27
Identities = 103/117 (88%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 121 tactccctctgtccgaaaatacttgtcatcaaaatggataaaaatgaatgtatctagaac 62
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||||||||||||||||| |||| | ||||||||||| ||||| |||||||||
Sbjct: 61 taaaatacatctagatacacccatctcaatgacaagtattttcggacagagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 ttactactccctccgtccgaaaatacttgtc 41
||||||||||||| |||||||||||||||||
Sbjct: 1 ttactactccctctgtccgaaaatacttgtc 31
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 121 bits (61), Expect = 3e-27
Identities = 106/121 (87%)
Strand = Plus / Plus
Query: 13 actactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctaga 72
|||||||| |||||||| || ||||||||| | |||| ||||||||| |||||||||||
Sbjct: 3 actactccgtccgtccggaattacttgtcgcacaaatatataaaaatgaatgtatctaga 62
Query: 73 actaaaatacatctagatacatccattcctccgacaagtatttccggacggagggagtac 132
||||||||| |||||||||||| ||||||| | ||||||||| |||| |||||||||||
Sbjct: 63 actaaaatatatctagatacatacattcctatgccaagtattttcggatggagggagtac 122
Query: 133 t 133
|
Sbjct: 123 t 123
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 119 bits (60), Expect = 1e-26
Identities = 105/120 (87%)
Strand = Plus / Minus
Query: 12 tactactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctag 71
||||||||||||||| | |||||||||||| | ||||| ||| ||||||||| |||||
Sbjct: 124 tactactccctccgttcagaaatacttgtcgcaaaaatgaatataaatggatgcatctaa 65
Query: 72 aactaaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
|||||||||| |||| |||||||||||| | ||||||||||||||||||||| ||||||
Sbjct: 64 aactaaaatatgtctaaatacatccattctttcgacaagtatttccggacggaaggagta 5
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 119 bits (60), Expect = 1e-26
Identities = 99/112 (88%)
Strand = Plus / Plus
Query: 20 cctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaactaaaa 79
|||||||||| || ||||| ||| | ||||||||| ||||| |||||| |||||||||||
Sbjct: 10 cctccgtccggaattacttatcgcaaaaatggatagaaatgaatgtatttagaactaaaa 69
Query: 80 tacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
| ||||||||||||||||||| | |||||||||||| | |||||||||||||
Sbjct: 70 tgcatctagatacatccattctttcgacaagtattttctgacggagggagta 121
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 13 actactccctccgtccgaaaatacttgtcg 42
||||||||||||||| ||||||||||||||
Sbjct: 123 actactccctccgtcagaaaatacttgtcg 94
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 115 bits (58), Expect = 2e-25
Identities = 101/114 (88%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 19 ccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaact-aa 77
|||||| |||| || ||||||||| |||||||| |||||||| |||||||||||||| ||
Sbjct: 8 ccctccatccggaattacttgtcgtagaaatgggtaaaaatgaatgtatctagaactaaa 67
Query: 78 aatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||| | |||||||||| ||| |||||||| ||||||||||| ||||||||||
Sbjct: 68 aatacgtttagatacatctatttctccgacaggtatttccggatggagggagta 121
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 12 tactactccctccgtccgaaaatacttgtcggagaaat 49
||||||||||||| |||| |||||| ||||||||||||
Sbjct: 124 tactactccctccatccggaaatacctgtcggagaaat 87
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 115 bits (58), Expect = 2e-25
Identities = 104/118 (88%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||| ||||| || ||||||| | ||||||||| |||||| |||||| ||||||
Sbjct: 120 tactccctctgtccggaattacttgt-gccgaaatggattaaaatgaatgtatttagaac 62
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagtac 132
|||||||| |||||||||||| ||| ||| ||||||||||| ||||||||||||||||
Sbjct: 61 taaaatacgtctagatacatcaatttctcagacaagtattttcggacggagggagtac 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaat 49
||||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtctgagaaat 39
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 115 bits (58), Expect = 2e-25
Identities = 104/118 (88%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 14 ctactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaa 73
|||||||||||||||| |||||||||| ||| ||||||||||||||| |||| | || ||
Sbjct: 121 ctactccctccgtccggaaatacttgtggga-aaatggataaaaatgaatgtgtataaaa 63
Query: 74 ctaaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||| || ||||||| |||||||| ||||||||||||||||| |||||||| ||||
Sbjct: 62 ctaaagcacgtctagatgcatccatttctccgacaagtatttccagacggaggaagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggat 53
|||| |||||||| | |||||||||||||||||||||||
Sbjct: 5 tacttcctccgtctggaaatacttgtcggagaaatggat 43
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 106 acaagtatttccggacggagggagta 131
||||||||||||||||||||||||||
Sbjct: 95 acaagtatttccggacggagggagta 120
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 115 bits (58), Expect = 2e-25
Identities = 103/118 (87%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||| || |||||||| | ||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtccggaattacttgtcacataaatgtataaaaatggatgtatctagaat 64
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagtac 132
|| ||||||||||||||||| ||||||| ||||||||||| | | |||||||||||
Sbjct: 65 tataatacatctagatacatacattcctatgacaagtattttcagttggagggagtac 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 105 gacaagtatttccggacggagggagta 131
|||||||| ||||||||||||||||||
Sbjct: 31 gacaagtaattccggacggagggagta 5
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 111 bits (56), Expect = 3e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 56 aaatggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtattt 115
|||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct: 80 aaatggatgtatctagaactgaaatacatctagatacatccatttccgcgacaagtattt 21
Query: 116 ccggacggagggagtactta 135
| |||| |||||||||||||
Sbjct: 20 cgggacagagggagtactta 1
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 84 tctagatacatccattcctccgacaagtatttcc 117
|||||||||||||||| || ||||||||| ||||
Sbjct: 64 tctagatacatccatttctacgacaagtaattcc 97
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 107 bits (54), Expect = 4e-23
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtcatcaaaatggacaaaaagggatgtatttagaac 64
Query: 75 taaaatacatctagatacatcc 96
||||||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatcc 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctaga 72
||||||||||||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtcatcaaaatgaataaaaggggatgtatctaga 74
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 105 gacaagtatttccggacggagggagtact 133
||||||||||| |||||||||||||||||
Sbjct: 31 gacaagtattttcggacggagggagtact 3
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 107 bits (54), Expect = 4e-23
Identities = 103/118 (87%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||| ||||||||||| | ||||||||| | |||||||||||| |||
Sbjct: 5 tactccctccgtccggaaatacttgtcctaaaaatggatatat-tggatgtatctataac 63
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagtac 132
||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||
Sbjct: 64 taaaataagtctagatacattcatctctaggacaagtatttccggacggagggagtac 121
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 105 gacaagtatttccggacggagggagta 131
|||||||||||||||||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtc 41
||||||||||||||| |||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgtc 94
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 107 bits (54), Expect = 4e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 56 aaatggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtattt 115
||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||
Sbjct: 36 aaatggatgtatctagaactaaaatacatctagatacatccatacgtgcgacaagtaatt 95
Query: 116 ccggacggagggagtact 133
| | ||||||||||||||
Sbjct: 96 cggaacggagggagtact 113
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 55 aaaatggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtatt 114
||||||||| |||||||||||||||||| |||||||||||||||| || |||||||| |
Sbjct: 35 aaaatggatctatctagaactaaaatacgtctagatacatccatttctgagacaagtaat 94
Query: 115 tccggacggagggagtact 133
|||| ||||||||||||||
Sbjct: 95 tccgaacggagggagtact 113
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 101 bits (51), Expect = 3e-21
Identities = 103/119 (86%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||| ||||||||||| ||||||| ||| || |||||||||||| |||
Sbjct: 5 tactccctccgtccggaaatacttgtcccagaaatgaatataa-tggatgtatctataac 63
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagtact 133
||||||| |||||||| || ||| | | ||||||||||||||||||||||||||||
Sbjct: 64 taaaataagtctagatatattcatccttagaacaagtatttccggacggagggagtact 122
Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 105 gacaagtatttccggacggagggagtactt 134
||||||||||||||||||||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagtactt 2
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgt 40
||||||||||||||| ||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgt 95
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 99.6 bits (50), Expect = 1e-20
Identities = 98/114 (85%)
Strand = Plus / Plus
Query: 18 tccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaactaa 77
||||||||| ||||| |||| ||| | ||||||||||||||||||||||||| || |||
Sbjct: 8 tccctccgttcgaaattactcgtcacaaaaatggataaaaatggatgtatctacaattaa 67
Query: 78 aatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||||||||||||||| |||| || ||| |||| ||| | ||||||||||||
Sbjct: 68 aatacatctagatacattcatttcttggacgagtaattctgaacggagggagta 121
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 55 aaaatggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtatt 114
||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||
Sbjct: 35 aaaatggatgtgtctagaactaaaatacatctagatatatccatttcaatgacaagtatt 94
Query: 115 tccggacggagggagta 131
| |||||||||||||||
Sbjct: 95 ttcggacggagggagta 111
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 12 tactactccctccgtccgaaaatacttgtcggagaaatggata 54
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 114 tactactccctccgtccgaaaatacttgtcattgaaatggata 72
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 97.6 bits (49), Expect = 4e-20
Identities = 89/101 (88%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 32 aatacttgtcggagaaatggataaaaatggatgtatctagaactaaaatacatctagata 91
||||||||||||||||| |||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 22 aatacttgtcggagaaacggataaaaatggatgtatgtagaactaaaatacgtctaaata 81
Query: 92 catccattcctccgacaagtatttccggacggagggagtac 132
||| |||| |||||||| ||||| | || | |||||||||
Sbjct: 82 cattcatt-ttccgacaaatattttcagatgaagggagtac 121
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 54 aaaaatggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtat 113
|||||||||||||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct: 34 aaaaatggatgtatctagaactaaaatatgtctagatacatccattttttcgacaagtaa 93
Query: 114 ttccggacggagggagta 131
||| | ||||||||||||
Sbjct: 94 ttcagaacggagggagta 111
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 58 atggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtatttcc 117
||||||||||||||||||||||||||||||||||||| |||| || ||||||||| ||||
Sbjct: 38 atggatgtatctagaactaaaatacatctagatacattcatttctgcgacaagtaattcc 97
Query: 118 ggacggagggagta 131
||||| ||||||
Sbjct: 98 aaacggatggagta 111
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 91.7 bits (46), Expect = 2e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
|||||||||||| |||||||||||||| |||||||||| || |||||||||||||
Sbjct: 5 tactccctccgttcgaaaatacttgtcatcaaaatggataataagaaatgtatctagaac 64
Query: 75 taaaatacatctagatacatcc 96
||||||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatcc 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtc 41
||||||||||||||| |||||||||||
Sbjct: 132 tactccctccgtccggaaatacttgtc 106
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 89.7 bits (45), Expect = 1e-17
Identities = 100/117 (85%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||| ||||||||||| ||||||| |||||| || ||||||||| |||
Sbjct: 5 tactccctccgtccgcaaatacttgtcctagaaatgaataaaattg-atgtatctataac 63
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||||| |||| ||||| ||||| || | ||||||||| | |||||||||||||
Sbjct: 64 taaaataagtctacatacaaccatttctagggcaagtattttcagacggagggagta 120
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 105 gacaagtatttccggacggagggagtac 132
||||||||||| ||||||||||||||||
Sbjct: 31 gacaagtatttgcggacggagggagtac 4
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 55 aaaatggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtatt 114
||||| |||||||||||||||||||||| |||||||||||||||| ||||||||| |
Sbjct: 35 aaaatagatgtatctagaactaaaatacgtctagatacatccattttcgcgacaagtaat 94
Query: 115 tccggacggagggagta 131
|||| ||||||||||||
Sbjct: 95 tccgaacggagggagta 111
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 89.7 bits (45), Expect = 1e-17
Identities = 100/117 (85%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
|||||||||||||| ||||||||||| ||||||| ||| || | |||||||||| |||
Sbjct: 5 tactccctccgtccagaaatacttgtcctagaaatgaatataa-tagatgtatctataac 63
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||||| ||||||||||| |||| | |||||||||||||| ||||||||||||
Sbjct: 64 taaaataagtctagatacattcatttttaggacaagtatttccgaacggagggagta 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 105 gacaagtatttccggacggagggagta 131
|||||||||||| ||||||||||||||
Sbjct: 31 gacaagtatttctggacggagggagta 5
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||| || |||||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 5 tactcgcttcgtccgaaaatacttgtcatcaaaatggataaaaaagaatgtatctagaat 64
Query: 75 taaaatacatctagatacatc 95
|||||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatc 85
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 56 aaatggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtattt 115
|||||||| |||||| |||||||||||||||||||||||||||| || |||| |||| ||
Sbjct: 80 aaatggatatatctaaaactaaaatacatctagatacatccatttctgcgacgagtaatt 21
Query: 116 ccggacggagggagta 131
| | ||||||||||||
Sbjct: 20 cagaacggagggagta 5
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 87.7 bits (44), Expect = 4e-17
Identities = 102/120 (85%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 12 tactactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctag 71
|||||||||||| |||||||||| ||||| |||||||||| | |||||||||||| |
Sbjct: 2 tactactccctctatccgaaaatatttgtcctagaaatggat-ataatggatgtatccat 60
Query: 72 aactaaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
|||||||||| || ||||||||| ||| | ||||||||||||||||||| |||||||
Sbjct: 61 aactaaaataaatttagatacattcatctttaggacaagtatttccggacggggggagta 120
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 56 aaatggatgtatctagaactaaaatacatctagatacatccat 98
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 aaatggatgtatctagaactaaaatacatctagatacatccat 37
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 83.8 bits (42), Expect = 6e-16
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||| ||||| ||||| |||||||||||| | ||||||||||||
Sbjct: 5 tactccctccgtccggaaatatttgtcatcagaatggataaaaagtggtgtatctagaac 64
Query: 75 taaaatacatctagatacatcc 96
||||||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatcc 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 105 gacaagtatttccggacggagggagta 131
||||| |||||||||||||||||||||
Sbjct: 31 gacaaatatttccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtc 41
||||||||||||||| |||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtc 105
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 83.8 bits (42), Expect = 6e-16
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||||||||||||||| ||||| | ||||| ||| ||||||||||
Sbjct: 130 tactccctccgtccgaaaatacttgtcatcaaaatgaacaaaaagagatatatctagaac 71
Query: 75 taaaatacatctagatacatcc 96
||||||||||||| ||||||||
Sbjct: 70 taaaatacatctaaatacatcc 49
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 105 gacaagtatttccggacggagggagtac 132
||||||||||| ||||||||||||||||
Sbjct: 104 gacaagtattttcggacggagggagtac 131
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 83.8 bits (42), Expect = 6e-16
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||||||||||||||| | ||| | ||||| ||||||| ||||||
Sbjct: 142 tactccctccgtccgaaaatacttgtcatcaatatgaacaaaaagagatgtatgtagaac 83
Query: 75 taaaatacatctagatacatcc 96
||||||||||||||||||||||
Sbjct: 82 taaaatacatctagatacatcc 61
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 105 gacaagtatttccggacggagggagta 131
||||||||||| |||||||||||||||
Sbjct: 116 gacaagtattttcggacggagggagta 142
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 56 aaatggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtattt 115
|||||||||||||||||||| ||| | |||||||||||||||| || ||||||||| ||
Sbjct: 80 aaatggatgtatctagaactgaaaaatgtctagatacatccatttctacgacaagtaatt 21
Query: 116 ccggacggaggga 128
||| |||||||||
Sbjct: 20 ccgaacggaggga 8
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 55 aaaatggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtatt 114
|||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |
Sbjct: 35 aaaatggatgtatctagaactaaaatacatcttgatacatccataagtgcgacaagtaat 94
Query: 115 tccggacggaggg 127
|| | ||||||||
Sbjct: 95 tcggaacggaggg 107
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
|||||||||||||| |||||| ||||| ||||||||||||| |||| |||||| |||
Sbjct: 131 tactccctccgtccaaaaataattgtcatcaaaatggataaaaaaggatatatctaaaac 72
Query: 75 taaaatacatctagatacatc 95
||| |||||||||||||||||
Sbjct: 71 taatatacatctagatacatc 51
>RF00906;MIR1122;AK249975.1/2279-2156 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 81.8 bits (41), Expect = 2e-15
Identities = 99/117 (84%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
|||||| |||||||||||||||||||| |||||| |||||| ||| ||||| || |||
Sbjct: 120 tactccatccgtccgaaaatacttgtcctagaaataaataaaa-tgggtgtatttataac 62
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||||| |||| ||||||| ||| | |||||||||||||||| ||||||||||
Sbjct: 61 taaaataattctacatacatctatttttaagacaagtatttccggatggagggagta 5
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 79.8 bits (40), Expect = 9e-15
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 56 aaatggatgtatctagaactaaaatacatctagatacatccatt 99
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 80 aaatggatgtatctataactaaaatacatctagatacatccatt 37
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 79.8 bits (40), Expect = 9e-15
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 52 ataaaaatggatgtatctagaactaaaatacatctagatacatccatt 99
||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 32 ataaaaatggatgtatctataactaaaatacatctagatacattcatt 79
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 86 tagatacatccattcctccgacaagtatttccggacggagggagtac 132
|||||||||||||| | |||||||| ||||| |||||||||||||
Sbjct: 50 tagatacatccatttttatgacaagtaattccgaacggagggagtac 4
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 24 cgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaactaaaataca 83
|||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggataaaaaatgatgtacctagaactaaaataca 73
Query: 84 tctagatacat 94
|||| ||||||
Sbjct: 74 tctatatacat 84
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 24 cgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaactaaaataca 83
|||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggataaaaagagatgtacctagaactaaaatata 73
Query: 84 tctagatacat 94
|||||||||||
Sbjct: 74 tctagatacat 84
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtc 41
|||||||||||||||||||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtc 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 105 gacaagtatttccggacggagggagta 131
||||||||||| |||||||||||||||
Sbjct: 105 gacaagtattttcggacggagggagta 131
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaaatggataaaaataaatgtatttagaac 72
Query: 75 taaaata 81
|||||||
Sbjct: 71 taaaata 65
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtc 41
|||||||| ||||||||||||||||||
Sbjct: 5 tactcccttcgtccgaaaatacttgtc 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 105 gacaagtatttccggacggagggagta 131
||||||||||| |||||||||||||||
Sbjct: 105 gacaagtattttcggacggagggagta 131
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||||||||||||||| || || |||||| ||||||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaagtgactaaaaagagatgtatctagaac 72
Query: 75 taaaatacatctagatacatcc 96
||||||| |||||||||||||
Sbjct: 71 taaaatatgtctagatacatcc 50
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctaga 72
||||||||||||||| ||||||||||| |||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcatcaaaatggataaaaggggatgtatctaga 62
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 105 gacaagtatttccggacggagggagta 131
||||||||||| |||||||||||||||
Sbjct: 105 gacaagtattttcggacggagggagta 131
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 75.8 bits (38), Expect = 1e-13
Identities = 99/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||| ||||||||||| | ||||| |||||| |||||||||||| ||
Sbjct: 120 tactccctccgtccggaaatacttgtcataaaaatgtataaaa-tggatgtatctataag 62
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagtac 132
||||||| |||||||||||| | | | ||||||||||| || ||| |||||||||
Sbjct: 61 taaaataagtctagatacatctacttttaggacaagtattttcgaacgaagggagtac 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 105 gacaagtatttccggacggagggagtact 133
|||||||||||||||||||||||||||||
Sbjct: 94 gacaagtatttccggacggagggagtact 122
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 73.8 bits (37), Expect = 6e-13
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||| || |||||||| ||||||| | ||||| |||||| ||||||
Sbjct: 121 tactccctccgtccggaattacttgtcaccaaaatggaaataaatgaatgtatttagaac 62
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||||| | ||||| |||||||| | | |||||| ||||||||||||||||||
Sbjct: 61 taaaatatgtttagatgcatccatttttatgtcaagtaattccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 105 gacaagtatttccggacggagggagta 131
|||||||| ||||||||||||||||||
Sbjct: 95 gacaagtaattccggacggagggagta 121
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 56 aaatggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtattt 115
||||| |||||||||||||||||||||| ||||||||||| ||| || |||| | || ||
Sbjct: 80 aaatgaatgtatctagaactaaaatacaactagatacatctatttctgcgacgaataatt 21
Query: 116 ccggacggagggagtactta 135
| ||||||||||||||||
Sbjct: 20 cgaaacggagggagtactta 1
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 55 aaaatggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtatt 114
|||||| |||||||||||||||||| | |||||||||||||||| || ||||||||| |
Sbjct: 89 aaaatgaatgtatctagaactaaaactcgtctagatacatccatttctgcgacaagtaat 30
Query: 115 tccg 118
||||
Sbjct: 29 tccg 26
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 69.9 bits (35), Expect = 9e-12
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 56 aaatggatgtatctagaact-aaaatacatctagatacatccattcctccgacaagtatt 114
|||||||||||||||||||| ||||| | |||||||||||||||| | || |||||| |
Sbjct: 37 aaatggatgtatctagaactaaaaatgcgtctagatacatccatttttgcggcaagtaat 96
Query: 115 tccggacggagggagtact 133
||||||| |||||| ||||
Sbjct: 97 tccggacagagggaatact 115
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 67.9 bits (34), Expect = 4e-11
Identities = 99/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatac-ttgtcggagaaatggataaaaatggatgtatctagaa 73
|||||||||||||| ||||||| ||||| ||||||||||| || | || ||||||| ||
Sbjct: 121 tactccctccgtcccaaaatactttgtcctagaaatggatataact-gaagtatctataa 63
Query: 74 ctaaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||||| |||||||||||| ||| || ||||||||||||| ||||||| ||||
Sbjct: 62 ttaaaataaatctagatacattcatctctaaaacaagtatttccgaacggaggtagta 5
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 97/117 (82%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||||| ||||||||| | | |||| ||| || |||||||||||| |||
Sbjct: 120 tactccctccgtccggaaatacttgacctaaaaataaatataa-tggatgtatctataac 62
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||||| ||||||| |||||||| | ||||||||||| |||||||||||||
Sbjct: 61 taaaataagtctagattcatccatttttaggacaagtatttttagacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 107 caagtatttccggacggagggagtac 132
||||||||||||||||||||||||||
Sbjct: 96 caagtatttccggacggagggagtac 121
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 tactactccctccgtccgaaaatacttgtc 41
|||||||||||||||| ||||||||||||
Sbjct: 2 tactactccctccgtctaaaaatacttgtc 31
>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 97/117 (82%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
|||||| |||||||||||||||||||| | |||| || | |||||||||||||| ||
Sbjct: 5 tactccatccgtccgaaaatacttgtcctaaaaatacat-ataatggatgtatctacaat 63
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
|| |||| ||||||||||| ||| | |||||||||||||||||||||| ||||
Sbjct: 64 tagaataagtctagatacattcatctgtaggacaagtatttccggacggaggtagta 120
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 56 aaatggatgtatctagaactaaaatacatctagatacatccattcctccgacaagtattt 115
||||||| |||| ||||||||||||||||||||||| ||| ||| |||||| || ||
Sbjct: 36 aaatggacgtatttagaactaaaatacatctagatatatctattttcgcgacaattaatt 95
Query: 116 ccggacggagggagtact 133
||| |||||||| |||||
Sbjct: 96 ccgaacggagggggtact 113
>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 123
Score = 60.0 bits (30), Expect = 9e-09
Identities = 96/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtcggagaaatggataaaaatggatgtatctagaac 74
||||||||||||| ||||||||||||| | | || |||||| ||||||| || |||
Sbjct: 5 tactccctccgtcagaaaatacttgtcctaaagataaataaaat--gatgtatgtataac 62
Query: 75 taaaatacatctagatacatccattcctccgacaagtatttccggacggagggagta 131
||||||| ||||||||||| |||| | |||| |||||||||||||| |||||||
Sbjct: 63 taaaataagtctagatacattcatttcgaagacaggtatttccggacggggggagta 119
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 106 acaagtatttccggacggagggagtact 133
||||||||||||||||||||||||||||
Sbjct: 112 acaagtatttccggacggagggagtact 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 72 aactaaaatacatctagatacatccattcctccgacaagtattt 115
|||||||||| ||||||||||||| ||| || |||||||||||
Sbjct: 64 aactaaaataaatctagatacatctatttctaggacaagtattt 21
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgtccgaaaatacttgt 40
||||||||||||||| ||||||||||
Sbjct: 137 tactccctccgtccggaaatacttgt 112
>RF00906;MIR1122;FJ427399.1/11963-11864 4571:Triticum turgidum
Length = 100
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtc 41
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtc 31
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 105 gacaagtatttccggacggagggagtactt 134
||||||||||| ||||||||||||||||||
Sbjct: 31 gacaagtattttcggacggagggagtactt 2
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 ctactccctccgtccgaaaatacttgtc 41
||||| ||||||||||||||||||||||
Sbjct: 97 ctacttcctccgtccgaaaatacttgtc 70
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 56 aaatggatgtatctagaactaaaatacatctagatacat 94
||||| |||||||||||| ||||||| ||||||||||||
Sbjct: 36 aaatgaatgtatctagaattaaaataaatctagatacat 74
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 56 aaatggatgtatctagaactaaaatacatctagatacat 94
|||||||||||||||| ||| |||||| |||||||||||
Sbjct: 36 aaatggatgtatctagcactgaaatacgtctagatacat 74
>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
Length = 147
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 87 agatacatccattcctccgacaagtatttccggacggagggagtac 132
|||||||||||| ||| ||||||||| ||| | |||||||||||||
Sbjct: 99 agatacatccatacctgcgacaagtaattcggaacggagggagtac 144
>RF00906;MIR1122;AY951949.1/1544-1411 4568:Triticum monococcum
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 105 gacaagtatttccggacggagggagtactta 135
||||||||||| ||||||||| |||||||||
Sbjct: 31 gacaagtattttcggacggagagagtactta 1
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgtccgaaaatacttgtc 41
||||| |||||||||||||||||||||
Sbjct: 5 tactctctccgtccgaaaatacttgtc 31
>RF00906;MIR1122;EF104384.1/242-122 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 105 gacaagtatttccggacggagggagta 131
||||||| |||||||||||||||||||
Sbjct: 92 gacaagtttttccggacggagggagta 118
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 12 tactactccctccgtccgaaaatacttgtc 41
|||||||||||||||||| ||| |||||||
Sbjct: 121 tactactccctccgtccggaaaaacttgtc 92
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 53 taaaaatggatgtatctaga-actaaaatacatctagatacat 94
|||||||||| ||||||| | |||||||||| |||||||||||
Sbjct: 84 taaaaatggacgtatctatatactaaaatacgtctagatacat 42
