miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00778;MIR473;AASG02001028.1/43240-43323 3988:Ricinus communis
          (castor bean)
          Length = 84

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  ttcactctccctcaagggcttct 31
          |||||||||||||||||||||||
Sbjct: 5  ttcactctccctcaagggcttct 27





>RF00778;MIR473;AP010317.1/1930-2032 34305:Lotus japonicus
          Length = 103

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 5  gttgttcactctccctcaagggcttct 31
          |||||| ||||||||||||||||||||
Sbjct: 1  gttgtttactctccctcaagggcttct 27





>RF00778;MIR473;CAAP02001120.1/40161-40059 29760:Vitis vinifera
          Length = 103

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 5  gttgttcactctccctcaagggcttct 31
          |||| ||||||||||||||||||||||
Sbjct: 1  gttgctcactctccctcaagggcttct 27





>RF00778;MIR473;AP010317.1/2146-2225 34305:Lotus japonicus
          Length = 80

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 tcactctccctcaagggcttct 31
          ||||||||||||||||||||||
Sbjct: 6  tcactctccctcaagggcttct 27