miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00075;mir-166;AASG02010073.1/7999-8131 3988:Ricinus communis
          (castor bean)
          Length = 133

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                   
Query: 5  tttgaggggaatgttgtctggctcgaggactctcttttgat 45
          |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgaggactctcttttgat 41



 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 84  agtgtcgtcggaccaggcttcattccccccaat 116
           |||||||||||||||||||||||||||||||||
Sbjct: 101 agtgtcgtcggaccaggcttcattccccccaat 133




>RF00075;mir-166;ABIM01020443.1/6232-6097 3649:Carica papaya
           (papaya)
          Length = 136

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                             
Query: 83  tagtgtcgtcggaccaggcttcattccccccaat 116
           ||||||||||||||||||||||||||||||||||
Sbjct: 103 tagtgtcgtcggaccaggcttcattccccccaat 136



 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 5  tttgaggggaatgttgtctggctcgaggac 34
          ||||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgaggac 30




>RF00075;mir-166;EU548853.1/145-266 3702:Arabidopsis thaliana (thale
           cress)
          Length = 122

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                             
Query: 83  tagtgtcgtcggaccaggcttcattccccccaat 116
           ||||||||||||||||||||||||||||||||||
Sbjct: 89  tagtgtcgtcggaccaggcttcattccccccaat 122



 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 5  tttgaggggaatgttgtctggctcgaggactct 37
          |||||||||| ||||||||||||||||||||||
Sbjct: 1  tttgaggggactgttgtctggctcgaggactct 33




>RF00075;mir-166;AARH01001165.1/83261-83385 3694:Populus
          trichocarpa
          Length = 125

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 5  tttgaggggaatgttgtctggctcgaggactct 37
          |||||||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgaggactct 33



 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 87  gtcgtcggaccaggcttcattccccccaat 116
           ||||||||||||||||||||||||||||||
Sbjct: 96  gtcgtcggaccaggcttcattccccccaat 125




>RF00075;mir-166;AM468140.2/16750-16595 29760:Vitis vinifera
          Length = 156

 Score = 63.9 bits (32), Expect = 4e-10
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 85  gtgtcgtcggaccaggcttcattccccccaat 116
           ||||||||||||||||||||||||||||||||
Sbjct: 125 gtgtcgtcggaccaggcttcattccccccaat 156



 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 5  tttgaggggaatgttgtctggctcgaggac 34
          ||||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgaggac 30




>RF00075;mir-166;CAAP02000145.1/77043-77192 29760:Vitis vinifera
          Length = 150

 Score = 63.9 bits (32), Expect = 4e-10
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 85  gtgtcgtcggaccaggcttcattccccccaat 116
           ||||||||||||||||||||||||||||||||
Sbjct: 119 gtgtcgtcggaccaggcttcattccccccaat 150



 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 5  tttgaggggaatgttgtctggctcgaggac 34
          ||||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgaggac 30




>RF00075;mir-166;AARH01006070.1/215270-215403 3694:Populus
          trichocarpa
          Length = 134

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 5  tttgaggggaatgttgtctggctcgaggact 35
          |||||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgaggact 31



 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 90  gtcggaccaggcttcattccccccaat 116
           |||||||||||||||||||||||||||
Sbjct: 108 gtcggaccaggcttcattccccccaat 134




>RF00075;mir-166;AASG02002547.1/1046-1166 3988:Ricinus communis
           (castor bean)
          Length = 121

 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 83  tagtgtcgtcggaccaggcttcattccccccaat 116
           ||||| ||||||||||||||||||||||||||||
Sbjct: 88  tagtgacgtcggaccaggcttcattccccccaat 121



 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 5  tttgaggggaatgttgtctggctcgagg 32
          ||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgagg 28




>RF00075;mir-166;AC144592.26/52711-52605 3880:Medicago truncatula
          (barrel medic)
          Length = 107

 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 5  tttgaggggaatgttgtctggctcgaggac 34
          ||||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgaggac 30



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 91  tcggaccaggcttcattccccccaat 116
           ||||||||||||||||||||||||||
Sbjct: 82  tcggaccaggcttcattccccccaat 107




>RF00075;mir-166;BABK01006649.1/1239-1127 34305:Lotus japonicus
          Length = 113

 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 5  tttgaggggaatgttgtctggctcgaggac 34
          ||||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgaggac 30



 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 84  agtgtcgtcggaccaggcttcattccccccaat 116
           ||||| |||||||||||||||||||||||||||
Sbjct: 81  agtgttgtcggaccaggcttcattccccccaat 113




>RF00075;mir-166;AP009261.1/72240-72093 4081:Solanum lycopersicum
          Length = 148

 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 83  tagtgtcgtcggaccaggcttcattccccccaat 116
           |||||| |||||||||||||||||||||||||||
Sbjct: 115 tagtgttgtcggaccaggcttcattccccccaat 148



 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 6  ttgaggggaatgttgtctggctcgagg 32
          |||||||||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgagg 28




>RF00075;mir-166;EU548832.1/235-380 3702:Arabidopsis thaliana
          (thale cress)
          Length = 146

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 5  tttgaggggaatgttgtctggctcgaggactct 37
          |||||||||| ||||||||||||||||||||||
Sbjct: 1  tttgaggggactgttgtctggctcgaggactct 33



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 91  tcggaccaggcttcattccccccaat 116
           ||||||||||||||||||||||||||
Sbjct: 121 tcggaccaggcttcattccccccaat 146




>RF00075;mir-166;AARH01000156.1/300448-300294 3694:Populus
          trichocarpa
          Length = 155

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 5  tttgaggggaatgttgtctggctcgagg 32
          ||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgagg 28



 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 90  gtcggaccaggcttcattccccccaat 116
           |||||||||||||||||||||||||||
Sbjct: 129 gtcggaccaggcttcattccccccaat 155




>RF00075;mir-166;AY599420.1/1-185 4096:Nicotiana sylvestris (wood
           tobacco)
          Length = 185

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 83  tagtgtcgtcggaccaggcttcattcccccca 114
           |||||| |||||||||||||||||||||||||
Sbjct: 154 tagtgttgtcggaccaggcttcattcccccca 185



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  tgaggggaatgttgtctggctcgagg 32
          ||||||||||||||||||||||||||
Sbjct: 1  tgaggggaatgttgtctggctcgagg 26




>RF00075;mir-166;EU956093.1/113-209 4577:Zea mays
          Length = 97

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 5  tttgaggggaatgttgtctggctcgagg 32
          ||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgagg 28




>RF00075;mir-166;ABXC01002952.1/108749-108653 4558:Sorghum bicolor
          (sorghum)
          Length = 97

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 5  tttgaggggaatgttgtctggctcgagg 32
          ||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgagg 28




>RF00075;mir-166;AP008208.1/26148565-26148667 39947:Oryza sativa
          Japonica Group
          Length = 103

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 5  tttgaggggaatgttgtctggctcgagg 32
          ||||||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcgagg 28




>RF00075;mir-166;ABIM01012128.1/12128-12036 3649:Carica papaya
           (papaya)
          Length = 93

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 68  tcggaccaggcttcattccccccaa 92




>RF00075;mir-166;EU548871.1/183-293 3702:Arabidopsis thaliana (thale
           cress)
          Length = 111

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 86  tcggaccaggcttcattccccccaa 110




>RF00075;mir-166;AARH01003608.1/24010-23917 3694:Populus trichocarpa
          Length = 94

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 69  tcggaccaggcttcattccccccaa 93




>RF00075;mir-166;AARH01004299.1/36070-36161 3694:Populus trichocarpa
          Length = 92

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 67  tcggaccaggcttcattccccccaa 91




>RF00075;mir-166;AARH01001058.1/130278-130374 3694:Populus
           trichocarpa
          Length = 97

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 72  tcggaccaggcttcattccccccaa 96




>RF00075;mir-166;AASG02007713.1/11405-11313 3988:Ricinus communis
           (castor bean)
          Length = 93

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 68  tcggaccaggcttcattccccccaa 92




>RF00075;mir-166;AASG02003618.1/9737-9830 3988:Ricinus communis
           (castor bean)
          Length = 94

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 69  tcggaccaggcttcattccccccaa 93




>RF00075;mir-166;AM448542.2/4591-4502 29760:Vitis vinifera
          Length = 90

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 65  tcggaccaggcttcattccccccaa 89




>RF00075;mir-166;AY664413.1/238586-238494 4577:Zea mays
          Length = 93

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 68  tcggaccaggcttcattccccccaa 92




>RF00075;mir-166;ABXC01000715.1/152379-152276 4558:Sorghum bicolor
           (sorghum)
          Length = 104

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 79  tcggaccaggcttcattccccccaa 103




>RF00075;mir-166;ABXC01006910.1/39676-39486 4558:Sorghum bicolor
          (sorghum)
          Length = 191

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 5  tttgaggggaatgttgtctggctcg 29
          |||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcg 25



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 166 tcggaccaggcttcattccccccaa 190




>RF00075;mir-166;AK251614.1/146-305 112509:Hordeum vulgare subsp.
          vulgare (domesticated barley)
          Length = 160

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 5  tttgaggggaatgttgtctggctcg 29
          |||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcg 25



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 135 tcggaccaggcttcattccccccaa 159




>RF00075;mir-166;AAAA02020902.1/104196-104017 39946:Oryza sativa
          Indica Group
          Length = 180

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 5  tttgaggggaatgttgtctggctcg 29
          |||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcg 25



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 155 tcggaccaggcttcattccccccaa 179




>RF00075;mir-166;AP003614.2/6887-6709 39947:Oryza sativa Japonica
          Group
          Length = 179

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 5  tttgaggggaatgttgtctggctcg 29
          |||||||||||||||||||||||||
Sbjct: 1  tttgaggggaatgttgtctggctcg 25



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 154 tcggaccaggcttcattccccccaa 178




>RF00075;mir-166;AAAA02007901.1/15784-15895 39946:Oryza sativa
           Indica Group
          Length = 112

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  tcggaccaggcttcattccccccaa 115
           |||||||||||||||||||||||||
Sbjct: 87  tcggaccaggcttcattccccccaa 111




>RF00075;mir-166;ABIM01027778.1/13122-13246 3649:Carica papaya
           (papaya)
          Length = 125

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 91  tcggaccaggcttcattcccccca 114
           ||||||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattcccccca 123



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 6  ttgaggggaatgttgtctggctcgagg 32
          ||||| |||||||||||||||||||||
Sbjct: 2  ttgagaggaatgttgtctggctcgagg 28




>RF00075;mir-166;AC232546.1/61469-61348 51351:Brassica rapa subsp.
          pekinensis
          Length = 122

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 5  tttgaggggaatgttgtctggctcgagg 32
          |||||||||||||||||||||| |||||
Sbjct: 1  tttgaggggaatgttgtctggcacgagg 28



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 89  cgtcggaccaggcttcattccccccaat 116
           ||||||||||||||||||||||| ||||
Sbjct: 95  cgtcggaccaggcttcattcccctcaat 122




>RF00075;mir-166;AC189313.2/128870-128784 51351:Brassica rapa subsp.
           pekinensis
          Length = 87

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 91  tcggaccaggcttcattcccccca 114
           ||||||||||||||||||||||||
Sbjct: 62  tcggaccaggcttcattcccccca 85




>RF00075;mir-166;AB016871.1/77005-76861 3702:Arabidopsis thaliana
          (thale cress)
          Length = 145

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 5  tttgaggggaatgttgtctggctcgagg 32
          |||||||||||||||||||||| |||||
Sbjct: 1  tttgaggggaatgttgtctggcacgagg 28



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 89  cgtcggaccaggcttcattccccccaat 116
           ||||||||||||||||||||||| ||||
Sbjct: 118 cgtcggaccaggcttcattcccctcaat 145




>RF00075;mir-166;EU548781.1/288-178 3702:Arabidopsis thaliana
          (thale cress)
          Length = 111

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 6  ttgaggggaatgttgtctggctcgagga 33
          |||||||||||||||||||| |||||||
Sbjct: 2  ttgaggggaatgttgtctggatcgagga 29




>RF00075;mir-166;AC140029.19/70272-70377 3880:Medicago truncatula
          (barrel medic)
          Length = 106

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 5  tttgaggggaatgttgtctggctcgagg 32
          |||||||||||||||| |||||||||||
Sbjct: 1  tttgaggggaatgttggctggctcgagg 28




>RF00075;mir-166;AC140029.19/70482-70585 3880:Medicago truncatula
           (barrel medic)
          Length = 104

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 91  tcggaccaggcttcattcccccca 114
           ||||||||||||||||||||||||
Sbjct: 79  tcggaccaggcttcattcccccca 102




>RF00075;mir-166;CAAP02000526.1/74430-74281 29760:Vitis vinifera
          Length = 150

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 5  tttgaggggaatgttgtctggctcgagg 32
          |||||||||| |||||||||||||||||
Sbjct: 1  tttgaggggattgttgtctggctcgagg 28



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 91  tcggaccaggcttcattccccccaat 116
           ||||||||||||||||||||| ||||
Sbjct: 125 tcggaccaggcttcattcccctcaat 150




>RF00075;mir-166;AM485267.2/15969-16057 29760:Vitis vinifera
          Length = 89

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 5  tttgaggggaatgttgtctggctcgagg 32
          |||||||||||||||| |||||||||||
Sbjct: 1  tttgaggggaatgttggctggctcgagg 28




>RF00075;mir-166;AC226041.1/11826-11708 4641:Musa acuminata
          Length = 119

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 5  tttgaggggaatgttgtctggctcgagg 32
          ||||||||||||||||||||| ||||||
Sbjct: 1  tttgaggggaatgttgtctgggtcgagg 28




>RF00075;mir-166;FJ010939.2/353-450 52838:Musa balbisiana
          Length = 98

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 9  aggggaatgttgtctggctcgagg 32
          ||||||||||||||||||||||||
Sbjct: 5  aggggaatgttgtctggctcgagg 28




>RF00075;mir-166;AY501431.1/1-212 4577:Zea mays
          Length = 212

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 91  tcggaccaggcttcattcccccca 114
           ||||||||||||||||||||||||
Sbjct: 189 tcggaccaggcttcattcccccca 212



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 7  tgaggggaatgttgtctggctcg 29
          |||||||||||||||||||||||
Sbjct: 1  tgaggggaatgttgtctggctcg 23




>RF00075;mir-166;ABIM01027778.1/12902-13001 3649:Carica papaya
          (papaya)
          Length = 100

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 6  ttgaggggaatgttgtctggctcgagg 32
          ||||||||||||||| |||||||||||
Sbjct: 2  ttgaggggaatgttggctggctcgagg 28




>RF00075;mir-166;AARH01003279.1/141842-141699 3694:Populus
          trichocarpa
          Length = 144

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 6  ttgaggggaatgttgtctggctcgagg 32
          ||||| |||||||||||||||||||||
Sbjct: 2  ttgagaggaatgttgtctggctcgagg 28




>RF00075;mir-166;AARH01006305.1/50528-50441 3694:Populus trichocarpa
          Length = 88

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 86  tgtcgtcggaccaggcttcattccccccaat 116
           |||| ||||||||||||||||||||| ||||
Sbjct: 58  tgtcctcggaccaggcttcattcccctcaat 88




>RF00075;mir-166;AC209184.1/141607-141700 3694:Populus trichocarpa
          Length = 94

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 86  tgtcgtcggaccaggcttcattccccccaat 116
           |||| ||||||||||||||||||||| ||||
Sbjct: 64  tgtcctcggaccaggcttcattcccctcaat 94




>RF00075;mir-166;BABK01014008.1/1570-1448 34305:Lotus japonicus
          Length = 123

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 6  ttgaggggaatgttgtctggctcgagg 32
          ||||||||||||||| |||||||||||
Sbjct: 2  ttgaggggaatgttggctggctcgagg 28




>RF00075;mir-166;AM464541.1/10325-10481 29760:Vitis vinifera
          Length = 157

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 6  ttgaggggaatgttgtctggctcgagg 32
          ||||| |||||||||||||||||||||
Sbjct: 2  ttgagaggaatgttgtctggctcgagg 28




>RF00075;mir-166;AC189591.2/50508-50400 51351:Brassica rapa subsp.
           pekinensis
          Length = 109

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 90  gtcggaccaggcttcattcccc 111
           ||||||||||||||||||||||
Sbjct: 83  gtcggaccaggcttcattcccc 104




>RF00075;mir-166;EU548911.1/166-263 3702:Arabidopsis thaliana (thale
           cress)
          Length = 98

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 90  gtcggaccaggcttcattcccc 111
           ||||||||||||||||||||||
Sbjct: 72  gtcggaccaggcttcattcccc 93




>RF00075;mir-166;AL590346.1/40100-40217 3702:Arabidopsis thaliana
           (thale cress)
          Length = 118

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  tcggaccaggcttcattccccc 112
           ||||||||||||||||||||||
Sbjct: 93  tcggaccaggcttcattccccc 114




>RF00075;mir-166;EU548905.1/187-287 3702:Arabidopsis thaliana (thale
           cress)
          Length = 101

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 90  gtcggaccaggcttcattcccc 111
           ||||||||||||||||||||||
Sbjct: 75  gtcggaccaggcttcattcccc 96




>RF00075;mir-166;CU302248.6/62232-62044 3880:Medicago truncatula
           (barrel medic)
          Length = 189

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 91  tcggaccaggcttcattccccccaat 116
           ||||||||||||||||||||| ||||
Sbjct: 164 tcggaccaggcttcattcccctcaat 189




>RF00075;mir-166;AC148487.14/34671-34762 3880:Medicago truncatula
           (barrel medic)
          Length = 92

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  tcggaccaggcttcattccccc 112
           ||||||||||||||||||||||
Sbjct: 67  tcggaccaggcttcattccccc 88




>RF00075;mir-166;BABK01014008.1/1327-1223 34305:Lotus japonicus
          Length = 105

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  tcggaccaggcttcattccccc 112
           ||||||||||||||||||||||
Sbjct: 80  tcggaccaggcttcattccccc 101




>RF00075;mir-166;CAAP02000553.1/130979-130890 29760:Vitis vinifera
          Length = 90

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 6  ttgaggggaatgttgtctggctcgag 31
          |||||||||||||||||||| |||||
Sbjct: 2  ttgaggggaatgttgtctggttcgag 27