miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00247;mir-160;CAAP02000723.1/67959-67874 29760:Vitis vinifera
Length = 86
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 acatgcctggctccttgtatgccatttgca 38
|||||||||||||| |||||||||||||||
Sbjct: 1 acatgcctggctccctgtatgccatttgca 30
>RF00247;mir-160;AC196190.2/61996-61908 4081:Solanum lycopersicum
Length = 89
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 atgcctggctccttgtatgccatttgca 38
|||||||||||| |||||||||||||||
Sbjct: 3 atgcctggctccctgtatgccatttgca 30
>RF00247;mir-160;CAAP02000343.1/40092-40007 29760:Vitis vinifera
Length = 86
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 atgcctggctccttgtatgccatttgca 38
|||||||||||| |||||||||||||||
Sbjct: 3 atgcctggctccctgtatgccatttgca 30
>RF00247;mir-160;ABIM01012188.1/1387-1471 3649:Carica papaya
(papaya)
Length = 85
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 tgcctggctccttgtatgccatttgca 38
||||||||||| |||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccatttgca 30
>RF00247;mir-160;AARH01003540.1/65975-65890 3694:Populus
trichocarpa
Length = 86
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 tgcctggctccttgtatgccatttgca 38
||||||||||| |||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccatttgca 30
