miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;ABXC01001527.1/885-965 4558:Sorghum bicolor
(sorghum)
Length = 81
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 234 caagattcttggaatgtcttataatttggaacggagg 270
||||||| |||||||| ||||||||||||||||||||
Sbjct: 46 caagattattggaatgacttataatttggaacggagg 10
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 12 ctactcctttcgttccaaattataagacattccaacaatcttg 54
||||||| | |||||||||||||||| |||||||| |||||||
Sbjct: 4 ctactccctccgttccaaattataagtcattccaataatcttg 46
>RF00906;MIR1122;ABXC01006180.1/72632-72485 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 246 aatgtcttataatttggaacggagg 270
|||||||||||||||||||||||||
Sbjct: 115 aatgtcttataatttggaacggagg 139
