miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;ABXC01007069.1/15131-14891 4558:Sorghum bicolor
(sorghum)
Length = 241
Score = 153 bits (77), Expect = 1e-36
Identities = 166/195 (85%), Gaps = 2/195 (1%)
Strand = Plus / Plus
Query: 57 aagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtgg 116
||||||| |||||||||||||| ||| |||| | ||||||||||||| ||||||||||
Sbjct: 48 aagtttgaccactcgtcttattcaaagttttg-tacaaaatatcactttttttgttgtgt 106
Query: 117 cttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaaan 176
||| |||||||||| ||||||||||||| ||||||||||||||| | |||| ||||||
Sbjct: 107 attggtttattaataaaagttcttcaagaatgacttaaatttgactatattttcacaaa- 165
Query: 177 nnnnnngaataagacgagtggtcaaacttggggtcaaaaaagtcaaacgaactataattt 236
|||||||||||||||||||||||||||| ||||||||||||||| || |||||
Sbjct: 166 ttttttgaataagacgagtggtcaaacttggggtaaaaaaagtcaaacgacttacaattt 225
Query: 237 ggaatggaggaagta 251
| ||||||| ||||
Sbjct: 226 gagatggagggagta 240
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 183 gaataagacgagtggtcaaacttggggtcaaaaaagtcaaacgaactataatttggaatg 242
||||||||||||||||||||||| |||| ||||||||||||||| || ||||||| |||
Sbjct: 70 gaataagacgagtggtcaaacttagggtaaaaaaagtcaaacgacttacaatttgggatg 11
Query: 243 ga 244
||
Sbjct: 10 ga 9
Score = 44.1 bits (22), Expect = 0.001
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttatt-aaaaaatttg 88
|||||||| |||||||||||||| ||||||||||
Sbjct: 195 caagtttgaccactcgtcttattcaaaaaatttg 162
>RF01062;MIR812;ABXC01000042.1/199795-199623 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 151 bits (76), Expect = 6e-36
Identities = 141/162 (87%), Gaps = 2/162 (1%)
Strand = Plus / Minus
Query: 57 aagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtgg 116
||||||| |||||||||||||| ||||||||| ||||||| |||||||||||||| ||||
Sbjct: 160 aagtttgaccactcgtcttattcaaaaatttg-tgcaaaacatcacttcttttgtcgtgg 102
Query: 117 cttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaaan 176
|||| |||| || || ||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 101 cttggtttaatagtaaaagttcttcaagaatgacttaaatttgactgtatttgcacaaa- 43
Query: 177 nnnnnngaataagacgagtggtcaaacttggggtcaaaaaag 218
|||||||||||||| |||||||||||||||||||||
Sbjct: 42 ttttttgaataagacgagtgatcaaacttggggtcaaaaaag 1
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttggggtcaaaaaag 218
||||||||||||||||||||||| | ||||||||||
Sbjct: 138 gaataagacgagtggtcaaacttagtgtcaaaaaag 173
>RF01062;MIR812;ABXC01004642.1/156730-156901 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 147 bits (74), Expect = 9e-35
Identities = 99/106 (93%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
|||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 161 caagtttgaccattcgtcttattaaaaaatttg-tgcaaaatatcacttcttttgttgtg 103
Query: 116 gcttgctttattaatagaagttcttcaagattgacttaaatttgac 161
||||| |||||||||| |||||||||| || |||||||||||||||
Sbjct: 102 gcttggtttattaataaaagttcttcaggaatgacttaaatttgac 57
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaacttggggtcaaaaa 216
|||||||||| ||||||||||||| ||||||||
Sbjct: 139 aataagacgaatggtcaaacttggtgtcaaaaa 171
>RF01058;MIR806;ABXC01001402.1/46929-46689 4558:Sorghum bicolor
(sorghum)
Length = 241
Score = 147 bits (74), Expect = 9e-35
Identities = 166/196 (84%), Gaps = 2/196 (1%)
Strand = Plus / Plus
Query: 57 aagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtgg 116
||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||
Sbjct: 48 aagtttgaccactcgtcttattcgaaaatttg-tgcaaaatatcacttcttttgtcgtgg 106
Query: 117 cttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaaan 176
|||| |||||||| | || |||||||| | |||||||||| |||| | ||| ||||||
Sbjct: 107 cttggtttattaacaaaaattcttcaataatgacttaaatgtgactatgtttacacaaa- 165
Query: 177 nnnnnngaataagacgagtggtcaaacttggggtcaaaaaagtcaaacgaactataattt 236
||||||||||||||||||||||| |||| |||||||||||||| ||||||||
Sbjct: 166 ttttttgaataagacgagtggtcaaacttagggtaaaaaaagtcaaacgtcttataattt 225
Query: 237 ggaatggaggaagtac 252
|| |||||| ||||||
Sbjct: 226 gggatggagtaagtac 241
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 183 gaataagacgagtggtcaaacttggggtcaaaaaagtcaaacgaactataatttggaatg 242
||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct: 70 gaataagacgagtggtcaaacttattgtcaaaaaagtcaaacgtcttataatttgggatg 11
Query: 243 ga 244
||
Sbjct: 10 ga 9
>RF01062;MIR812;ABXC01006771.1/63849-64020 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 139/163 (85%), Gaps = 2/163 (1%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
|||||||| ||||| |||||||| ||||||||| | |||||||||| ||||||||| |||
Sbjct: 161 caagtttgaccacttgtcttattcaaaaatttg-tacaaaatatcatttcttttgtcgtg 103
Query: 116 gcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaaa 175
||||| |||||||||| | ||||||||||| ||||||||||| ||| | |||| ||||||
Sbjct: 102 gcttggtttattaataaaggttcttcaagaatgacttaaattggactatatttacacaaa 43
Query: 176 nnnnnnngaataagacgagtggtcaaacttggggtcaaaaaag 218
||||||||||||||||||||| | ||||||||||||
Sbjct: 42 -ttttttgaataagacgagtggtcaaacatagggtcaaaaaag 1
>RF01062;MIR812;ABXC01005450.1/115662-115490 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 129 bits (65), Expect = 2e-29
Identities = 138/162 (85%), Gaps = 2/162 (1%)
Strand = Plus / Minus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgt 114
||||||||| |||||||||||||| |||| ||| || ||||||||||||| |||||||||
Sbjct: 162 tcaagtttgaccactcgtcttattcaaaatttt-atacaaaatatcactt-ttttgttgt 105
Query: 115 ggcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaa 174
| ||| |||||||||| ||||||||||||| ||||||||||||||| | ||||| ||||
Sbjct: 104 gtattggtttattaataaaagttcttcaagaatgacttaaatttgactatatttgtacaa 45
Query: 175 annnnnnngaataagacgagtggtcaaacttggggtcaaaaa 216
| |||||||||||||||||||||| |||| |||||
Sbjct: 44 atttttttaaataagacgagtggtcaaacttagggtaaaaaa 3
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttg 206
||||||||||||||||||||||||
Sbjct: 138 gaataagacgagtggtcaaacttg 161
>RF01062;MIR812;ABXC01005019.1/19673-19844 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 140/163 (85%), Gaps = 3/163 (1%)
Strand = Plus / Minus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgt 114
||||||||| |||||||||||||| ||| |||| | ||||||||||||| |||||||||
Sbjct: 161 tcaagtttgaccactcgtcttattcaaagttttg-tacaaaatatcactt-ttttgttgt 104
Query: 115 ggcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaa 174
| ||| |||||||||| ||||||||||||| ||||||||||||||| | ||||||||||
Sbjct: 103 gtattggtttattaataaaagttcttcaagaatgacttaaatttgactatatttgcacaa 44
Query: 175 annnnnnngaataagacgagtggtcaaacttggggtcaaaaaa 217
| ||||||||||||||||||||||||| || ||||||
Sbjct: 43 a-ttttttgaataagacgagtggtcaaacttggagtaaaaaaa 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttg 206
||||||||||||||||||||||||
Sbjct: 137 gaataagacgagtggtcaaacttg 160
Score = 44.1 bits (22), Expect = 0.001
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 56 caagtttgcccactcgtcttatt-aaaaaatttg 88
|||||||| |||||||||||||| ||||||||||
Sbjct: 13 caagtttgaccactcgtcttattcaaaaaatttg 46
>RF01062;MIR812;ABXC01001803.1/16468-16297 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 139/163 (85%), Gaps = 3/163 (1%)
Strand = Plus / Minus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgt 114
||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||| |
Sbjct: 161 tcaagtttgaccactcgtcttattcaaaaatttg-tgcaaaatatcacttcttttgtcat 103
Query: 115 ggcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaa 174
||| || |||||||||| ||||||||||||| ||||| |||||||| | |||| || |
Sbjct: 102 ggcctggtttattaata-aagttcttcaagaatgactcaaatttgattatgtttgtac-a 45
Query: 175 annnnnnngaataagacgagtggtcaaacttggggtcaaaaaa 217
| |||||||||||||||||||||||| ||||||||||
Sbjct: 44 atttttttgaataagacgagtggtcaaacttgaggtcaaaaaa 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttg 206
||||||||||||||||||||||||
Sbjct: 137 gaataagacgagtggtcaaacttg 160
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 tcaagtttgcccactcgtcttattaaaaaa 84
||||||||| |||||||||||||| |||||
Sbjct: 12 tcaagtttgaccactcgtcttattcaaaaa 41
>RF01062;MIR812;ABXC01001828.1/232689-232518 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 121 bits (61), Expect = 5e-27
Identities = 139/163 (85%), Gaps = 3/163 (1%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
|||||||| | |||||||||||| ||||||||| ||||||||||||||| |||||| |||
Sbjct: 160 caagtttgactactcgtcttattcaaaaatttg-tgcaaaatatcactttttttgtcgtg 102
Query: 116 gcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaaa 175
||||| ||||||||| || ||||| |||| |||||| |||||||| | ||||||||||
Sbjct: 101 gcttggtttattaattaaaattcttgaagaatgactt-aatttgactatttttgcacaaa 43
Query: 176 nnnnnnngaataagacgagtggtcaaacttggggtcaaaaaag 218
||||||||||||||||||||||||| ||||||||||
Sbjct: 42 -ttttttgaataagacgagtggtcaaacttggagtcaaaaaag 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttggggtcaaaaaag 218
||||||||||||| ||||||||||| || |||||||
Sbjct: 137 gaataagacgagtagtcaaacttggtgttaaaaaag 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 51 gacttcaagtttgcccactcgtcttatt-aaaaaatttg 88
|||| |||||||| |||||||||||||| ||||||||||
Sbjct: 8 gactccaagtttgaccactcgtcttattcaaaaaatttg 46
>RF01062;MIR812;ABXC01000698.1/205572-205399 4558:Sorghum bicolor
(sorghum)
Length = 174
Score = 121 bits (61), Expect = 5e-27
Identities = 129/151 (85%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgt 114
||||||||| |||||| ||||||| |||| |||| || ||||||||| ||||||||||||
Sbjct: 163 tcaagtttgaccactcatcttattcaaaattttg-tgtaaaatatcatttcttttgttgt 105
Query: 115 ggcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaa 174
|||||| |||||||||| ||||||||||| | ||||||||||||||| | |||| ||||
Sbjct: 104 ggcttggtttattaataaaagttcttcaataatgacttaaatttgactatgtttgtacaa 45
Query: 175 annnnnnngaataagacgagtggtcaaactt 205
| |||||||||||||||||||||||
Sbjct: 44 a-ttttttgaataagacgagtggtcaaactt 15
>RF01062;MIR812;ABXC01006794.1/234736-234565 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 137/162 (84%), Gaps = 2/162 (1%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
|||||||| |||||| ||||||| |||| |||| |||||||||||||||||||||| |||
Sbjct: 161 caagtttgaccactcatcttattcaaaattttg-tgcaaaatatcacttcttttgtcgtg 103
Query: 116 gcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaaa 175
||||| ||||||||| || ||| |||||| ||||||||||||||| | | |||| |||
Sbjct: 102 gcttggtttattaattaaaattcctcaagaatgacttaaatttgactatttctgcataaa 43
Query: 176 nnnnnnngaataagacgagtggtcaaacttggggtcaaaaaa 217
|||||||||||||||||||||||||||| ||||||
Sbjct: 42 -tttttcgaataagacgagtggtcaaacttggggtaaaaaaa 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttggggtcaaaaa 216
|||||||| |||||||||||||||| ||||||||
Sbjct: 138 gaataagatgagtggtcaaacttggtgtcaaaaa 171
>RF01062;MIR812;ABXC01001872.1/105008-104837 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 138/163 (84%), Gaps = 3/163 (1%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
|||||||| || ||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 160 caagtttgaccgctcgtcttattcaaaaattt-atacaaaatatcacttcttttgttgtg 102
Query: 116 gcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaaa 175
|||| ||||||||| || |||||||||| ||||||||||||||| | ||||||| ||
Sbjct: 101 acttggtttattaattaaaattcttcaaga-tgacttaaatttgactatttttgcac-aa 44
Query: 176 nnnnnnngaataagacgagtggtcaaacttggggtcaaaaaag 218
||||||||| |||||||||||||||| ||||||||
Sbjct: 43 gttttttgaataagactagtggtcaaacttgggaacaaaaaag 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttggggtcaaaaaag 218
|||||||||||| ||||||||||||| ||||||||
Sbjct: 137 gaataagacgagcggtcaaacttgggaacaaaaaag 172
>RF01062;MIR812;ABXC01006225.1/128526-128697 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 95/106 (89%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
|||||||| |||||||||||||| |||||||| || |||||||||||||||||||| |||
Sbjct: 159 caagtttgaccactcgtcttatttaaaaattt-atacaaaatatcacttcttttgtcgtg 101
Query: 116 gcttgctttattaatagaagttcttcaagattgacttaaatttgac 161
|||| ||||||||| || ||||||||| ||||||||||||||||
Sbjct: 100 acttggtttattaattaaaattcttcaaggttgacttaaatttgac 55
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaacttgg 207
||||||||||||||||||||||||
Sbjct: 137 aataagacgagtggtcaaacttgg 160
>RF01062;MIR812;ABXC01000470.1/249858-249686 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 138/164 (84%), Gaps = 2/164 (1%)
Strand = Plus / Minus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgt 114
||||||||| ||||| |||||||| ||||| ||| || ||||||||||||||||||||||
Sbjct: 162 tcaagtttgaccacttgtcttattcaaaaagttg-tgtaaaatatcacttcttttgttgt 104
Query: 115 ggcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaa 174
||||| |||||||||| || || ||||||| ||||||||||||||| | |||||| ||
Sbjct: 103 agcttggtttattaataaaattttttcaagaatgacttaaatttgactatgtttgcataa 44
Query: 175 annnnnnngaataagacgagtggtcaaacttggggtcaaaaaag 218
| ||||||||||||||||||||| |||| | |||||||
Sbjct: 43 a-ttttttgaataagacgagtggtcaaacctgggctaaaaaaag 1
>RF01062;MIR812;ABXC01001746.1/30280-30451 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 94/105 (89%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
|||||||| ||| || ||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 160 caagtttgaccattcatcttattcaaaaattt-atgcaaaatatcacttcttttgtcgtg 102
Query: 116 gcttgctttattaatagaagttcttcaagattgacttaaatttga 160
||||| | ||||| || ||||||||||||| ||||||||||||||
Sbjct: 101 gcttggtctattagtaaaagttcttcaagaatgacttaaatttga 57
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 51 gacttcaagtttgcccactcgtcttattaaaaaa 84
|||| |||||||| ||||||||||||||||||||
Sbjct: 8 gactccaagtttgaccactcgtcttattaaaaaa 41
>RF01062;MIR812;ABXC01000755.1/156170-155996 4558:Sorghum bicolor
(sorghum)
Length = 175
Score = 109 bits (55), Expect = 2e-23
Identities = 104/119 (87%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
||||||| ||||| |||||||| ||||||||| || ||||||||||||||||| | ||
Sbjct: 162 caagtttaaccacttgtcttattcaaaaatttg-tgtaaaatatcacttcttttttcatg 104
Query: 116 gcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaa 174
||||| |||||||||| ||||||||||||| |||||| |||||||| | ||||||||||
Sbjct: 103 gcttggtttattaataaaagttcttcaagaatgacttgaatttgactatatttgcacaa 45
>RF01062;MIR812;ABXC01000448.1/129870-129697 4558:Sorghum bicolor
(sorghum)
Length = 174
Score = 107 bits (54), Expect = 8e-23
Identities = 91/102 (89%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 60 tttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtggctt 119
|||| |||||||||||||| |||| ||| ||||||||||||||||||||||| ||| |||
Sbjct: 157 tttgaccactcgtcttattcaaaatttt-atgcaaaatatcacttcttttgtcgtgtctt 99
Query: 120 gctttattaatagaagttcttcaagattgacttaaatttgac 161
| ||||||||| ||||||||||| | |||||||||||||||
Sbjct: 98 ggtttattaatcaaagttcttcaataatgacttaaatttgac 57
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttggggtcaaaaaa 217
|||||||||||||||||||| |||| | |||||||
Sbjct: 138 gaataagacgagtggtcaaaattggtgacaaaaaa 172
>RF01062;MIR812;ABXC01000219.1/31418-31589 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 134/159 (84%), Gaps = 3/159 (1%)
Strand = Plus / Minus
Query: 60 tttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtggctt 119
|||| |||||||||||||| ||||||||| ||||||||||| || |||||| |||||||
Sbjct: 156 tttgaccactcgtcttatttaaaaatttg-tgcaaaatatctttt-ttttgtcgtggctt 99
Query: 120 gctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaaannnn 179
| |||||||||| |||| |||||||| ||||||||||||||| | |||||| |||
Sbjct: 98 gatttattaataaaagtgcttcaagaatgacttaaatttgactatgtttgcataaa-ttt 40
Query: 180 nnngaataagacgagtggtcaaacttggggtcaaaaaag 218
||||||||| ||||||||||||| |||| |||||||
Sbjct: 39 tttgaataagacaagtggtcaaacttagggtaaaaaaag 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaacttggggtcaaaaaa 217
||||||||||||||||||| |||| || ||||||
Sbjct: 138 aataagacgagtggtcaaatttggtgttaaaaaa 171
>RF01062;MIR812;ABXC01001535.1/75415-75584 4558:Sorghum bicolor
(sorghum)
Length = 170
Score = 101 bits (51), Expect = 5e-21
Identities = 136/163 (83%), Gaps = 5/163 (3%)
Strand = Plus / Minus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgt 114
||||||||| |||||||||||||| ||| |||| | |||||||||| || |||||||
Sbjct: 159 tcaagtttgaccactcgtcttattcaaagttttg-tacaaaatatcattt---ttgttgt 104
Query: 115 ggcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaa 174
| ||| |||||||||| ||||||||||||| ||| ||||||||||| | ||||||||||
Sbjct: 103 gtattggtttattaataaaagttcttcaagaatgatttaaatttgactatatttgcacaa 44
Query: 175 annnnnnngaataagacgagtggtcaaacttggggtcaaaaaa 217
| |||||||||||||||||||||||| ||| ||||||
Sbjct: 43 a-ttttttgaataagacgagtggtcaaacttgaggtgaaaaaa 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttg 206
||||||||||||||||||||||||
Sbjct: 135 gaataagacgagtggtcaaacttg 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 55 tcaagtttgcccactcgtcttatt-aaaaaatttg 88
||||||||| |||||||||||||| ||||||||||
Sbjct: 12 tcaagtttgaccactcgtcttattcaaaaaatttg 46
>RF01062;MIR812;ABXC01003795.1/241919-241747 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 84/94 (89%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 67 actcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtggcttgctttat 126
||||| |||||| |||||||| ||| |||||||||||| |||||| |||||||| |||||
Sbjct: 150 actcgccttatttaaaaattt-atgtaaaatatcactttttttgtcgtggcttggtttat 92
Query: 127 taatagaagttcttcaagattgacttaaatttga 160
|||| ||||||||||||| ||||||||||||||
Sbjct: 91 taatcaaagttcttcaagaatgacttaaatttga 58
Score = 44.1 bits (22), Expect = 0.001
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaa 96
||||||||| ||||||||||||| ||||| || ||||||||
Sbjct: 12 tcaagtttgatcactcgtcttattcaaaaaatttatgcaaaa 53
>RF01062;MIR812;ABXC01002403.1/57265-57089 4558:Sorghum bicolor
(sorghum)
Length = 177
Score = 99.6 bits (50), Expect = 2e-20
Identities = 139/168 (82%), Gaps = 6/168 (3%)
Strand = Plus / Minus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttctt----ttg 110
||||||||| |||||||||||||| ||| |||| | |||||||| |||| || |||
Sbjct: 166 tcaagtttgaccactcgtcttattcaaagttttg-tacaaaatattactttttgttgttg 108
Query: 111 ttgtggcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgc 170
||||| ||| |||||||||| ||||||||||||| ||||||||||||||| | ||||||
Sbjct: 107 ttgtgtattggtttattaataaaagttcttcaagaatgacttaaatttgactatatttgc 48
Query: 171 acaaannnnnnngaataagacgagtggtcaaacttggggtcaaaaaag 218
|| || ||||||||||||| |||||||||||||| |||||||
Sbjct: 47 ac-aatttttttgaataagacgagtagtcaaacttggggtaaaaaaag 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttg 206
||||||||||||||||||||||||
Sbjct: 142 gaataagacgagtggtcaaacttg 165
>RF01062;MIR812;ABXC01003647.1/52828-52661 4558:Sorghum bicolor
(sorghum)
Length = 168
Score = 99.6 bits (50), Expect = 2e-20
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
|||||||| ||||| |||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct: 156 caagtttgtccacttgtcttattcaaaaatttg-tgcaaaatatcacttcttttgtcgtg 98
Query: 116 gcttgctttattaatagaagtt 137
||||| |||||||||| |||||
Sbjct: 97 gcttggtttattaataaaagtt 76
>RF01062;MIR812;ABXC01003483.1/4962-5134 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 97.6 bits (49), Expect = 8e-20
Identities = 92/105 (87%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
|||||||| ||| | || ||||| |||||||| || |||||||| | || ||||||||||
Sbjct: 161 caagtttgaccatttgttttattcaaaaattt-atacaaaatattattttttttgttgtg 103
Query: 116 gcttgctttattaatagaagttcttcaagattgacttaaatttga 160
||||| |||||||||| ||||||||||||| ||||||||||||||
Sbjct: 102 gcttggtttattaataaaagttcttcaagaatgacttaaatttga 58
>RF01062;MIR812;ABXC01007119.1/3043-3215 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 97.6 bits (49), Expect = 8e-20
Identities = 126/151 (83%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
|||||||| | | |||||||||| ||||| || |||||||| |||||| |||||| |||
Sbjct: 161 caagtttgactattcgtcttattcaaaaaatt-atgcaaaaattcactttttttgtcgtg 103
Query: 116 gcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaaa 175
||||| |||||||||| ||||||| ||||| ||||||||||||||| ||||||||||
Sbjct: 102 gcttggtttattaataaaagttctacaagaatgacttaaatttgactctgtttgcacaaa 43
Query: 176 nnnnnnngaataagacgagtggtcaaacttg 206
||||||||||||||||||||||||
Sbjct: 42 -ttttttgaataagacgagtggtcaaacttg 13
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttggggtcaaaaaag 218
||||||||||| | ||||||||||| ||||||||||
Sbjct: 138 gaataagacgaatagtcaaacttggtgtcaaaaaag 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 55 tcaagtttgcccactcgtcttatt-aaaaaatttg 88
||||||||| |||||||||||||| ||||||||||
Sbjct: 12 tcaagtttgaccactcgtcttattcaaaaaatttg 46
>RF01062;MIR812;ABXC01005877.1/13533-13362 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 93.7 bits (47), Expect = 1e-18
Identities = 128/153 (83%), Gaps = 3/153 (1%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
|||||||| | |||||||||||| ||||||||| |||||||||||| ||||| ||| |||
Sbjct: 160 caagtttgacaactcgtcttatttaaaaatttg-tgcaaaatatcatttcttgtgtcgtg 102
Query: 116 gcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaaa 175
| ||| |||||||||| |||||||| || | ||||||||||||||| | |||||| |||
Sbjct: 101 gtttggtttattaataaaagttctt-aaaaatgacttaaatttgactatgtttgcagaaa 43
Query: 176 nnnnnnngaataagacgagtggtcaaacttggg 208
|||||||||||||| |||||||||||
Sbjct: 42 -ttttttgaataagacgagtgatcaaacttggg 11
>RF01062;MIR812;ABXC01000232.1/198823-198993 4558:Sorghum bicolor
(sorghum)
Length = 171
Score = 91.7 bits (46), Expect = 5e-18
Identities = 83/94 (88%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 65 ccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtggcttgcttt 124
|||||||||||||| ||||| ||| || |||||||||| | |||||| |||||||| |||
Sbjct: 152 ccactcgtcttattcaaaaaattg-tgtaaaatatcaccttttttgtcgtggcttggttt 94
Query: 125 attaatagaagttcttcaagattgacttaaattt 158
||||||| ||||| ||||||| ||||||||||||
Sbjct: 93 attaataaaagtttttcaagaatgacttaaattt 60
>RF01062;MIR812;ABXC01005914.1/7738-7914 4558:Sorghum bicolor
(sorghum)
Length = 177
Score = 89.7 bits (45), Expect = 2e-17
Identities = 97/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 106 ttttgttgtggcttgctttattaatagaagttcttcaagattgactt-aaatttgacgac 164
|||||||||| ||| |||||||||| ||||||||||||| |||||| ||||||||| |
Sbjct: 113 ttttgttgtgtattggtttattaataaaagttcttcaagaatgacttaaaatttgactat 54
Query: 165 atttgcacaaannnnnnngaataagacgagtggtcaaacttggggtcaaaaaag 218
||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 53 atttgcacaaattttttt-aataagacgagtggtcaaacttggggtaaaaaaag 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 56 caagtttgcccactcgtcttattaaaaaa 84
|||||||| ||||||||||||||||||||
Sbjct: 13 caagtttgaccactcgtcttattaaaaaa 41
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttg 206
||||||||||||||||||||||||
Sbjct: 142 gaataagacgagtggtcaaacttg 165
>RF01062;MIR812;ABXC01004215.1/130962-130791 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 89.7 bits (45), Expect = 2e-17
Identities = 126/151 (83%), Gaps = 3/151 (1%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgtg 115
|||||||| ||| |||||||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 160 caagtttgaccattcgtcttattcaaaattttc-tgcaaaatatcactt-ttttgccgtg 103
Query: 116 gcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcacaaa 175
|||| |||||||||| ||||||| ||||| |||||||||||| || | |||||||||||
Sbjct: 102 gcttagtttattaataaaagttctacaagaatgacttaaatttaactatatttgcacaaa 43
Query: 176 nnnnnnngaataagacgagtggtcaaacttg 206
||||||||||| ||||||||||||
Sbjct: 42 -ttttttgaataagacgaatggtcaaacttg 13
Score = 44.1 bits (22), Expect = 0.001
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 52 acttcaagtttgcccactcgtcttatt-aaaaaatttg 88
|||||||||||| ||| |||||||||| ||||||||||
Sbjct: 9 acttcaagtttgaccattcgtcttattcaaaaaatttg 46
>RF01062;MIR812;ABXC01000987.1/49747-49574 4558:Sorghum bicolor
(sorghum)
Length = 174
Score = 87.7 bits (44), Expect = 7e-17
Identities = 95/110 (86%), Gaps = 4/110 (3%)
Strand = Plus / Minus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcac---ttcttttgt 111
||||||||| |||||||||||||| |||| |||| |||||||| ||| || ||||||
Sbjct: 163 tcaagtttgaccactcgtcttatttaaaattttg-tgcaaaatttcaaatttttttttgt 105
Query: 112 tgtggcttgctttattaatagaagttcttcaagattgacttaaatttgac 161
||| |||| |||||||||| ||||||||||||| |||||||||||||||
Sbjct: 104 cgtgtcttggtttattaataaaagttcttcaagaatgacttaaatttgac 55
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaacttg 206
|||||||||||||||||||||||
Sbjct: 140 aataagacgagtggtcaaacttg 162
>RF01062;MIR812;ABXC01005818.1/40080-40250 4558:Sorghum bicolor
(sorghum)
Length = 171
Score = 85.7 bits (43), Expect = 3e-16
Identities = 92/107 (85%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgt 114
|||| |||| ||||| |||||||| ||||| ||| |||||||||||||||| ||||| ||
Sbjct: 162 tcaaatttgaccacttgtcttatttaaaaagttg-tgcaaaatatcacttcatttgtcgt 104
Query: 115 ggcttgctttattaatagaagttcttcaagattgacttaaatttgac 161
| |||| | ||||||| || |||||||||| |||||||||||||||
Sbjct: 103 gacttggtgtattaattaaaattcttcaagaatgacttaaatttgac 57
>RF01062;MIR812;ABXC01001786.1/383060-382891 4558:Sorghum bicolor
(sorghum)
Length = 170
Score = 85.7 bits (43), Expect = 3e-16
Identities = 93/107 (86%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgt 114
||||||||| |||||||||||||| ||| |||| | |||||||||| || |||||||||
Sbjct: 161 tcaagtttgaccactcgtcttattcaaagttttg-tacaaaatatcattt-ttttgttgt 104
Query: 115 ggcttgctttattaatagaagttcttcaagattgacttaaatttgac 161
| ||| |||||||||| ||||||||||| | |||||||||||||||
Sbjct: 103 gtattggtttattaataaaagttcttcaaaaatgacttaaatttgac 57
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 183 gaataagacgagtggtcaaacttg 206
||||||||||||||||||||||||
Sbjct: 137 gaataagacgagtggtcaaacttg 160
>RF01062;MIR812;ABXC01000199.1/121603-121435 4558:Sorghum bicolor
(sorghum)
Length = 169
Score = 83.8 bits (42), Expect = 1e-15
Identities = 104/122 (85%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcacttcttttgttgt 114
|||| |||| |||||||||||||| ||| |||| | |||||||||||| |||||||||
Sbjct: 160 tcaactttgaccactcgtcttatttaaagttttg-tataaaatatcactttttttgttgt 102
Query: 115 ggcttgctttattaatagaagttcttcaagattgactt-aaatttgacgacatttgcaca 173
| ||| |||| ||||| ||||||||||||| |||||| ||||||||| | |||||||||
Sbjct: 101 gtattggtttagtaataaaagttcttcaagaatgacttaaaatttgactatatttgcaca 42
Query: 174 aa 175
||
Sbjct: 41 aa 40
>RF01062;MIR812;ABXC01004413.1/188323-188497 4558:Sorghum bicolor
(sorghum)
Length = 175
Score = 77.8 bits (39), Expect = 7e-14
Identities = 126/152 (82%), Gaps = 4/152 (2%)
Strand = Plus / Minus
Query: 57 aagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcac-ttcttttgttgtg 115
||||||| |||||||||||||| ||| |||| | |||||||||| || ||||||||||
Sbjct: 162 aagtttgaccactcgtcttatttaaagttttg-tataaaatatcacttttttttgttgtg 104
Query: 116 gcttgctttattaatagaagttcttcaagattgactt-aaatttgacgacatttgcacaa 174
||| |||||||||| || |||||||||| |||||| ||||||||| | |||||||| |
Sbjct: 103 tattggtttattaataaaaattcttcaagagtgacttaaaatttgactatatttgcac-a 45
Query: 175 annnnnnngaataagacgagtggtcaaacttg 206
| ||||||||||||||||||||||||
Sbjct: 44 atttttttgaataagacgagtggtcaaacttg 13
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaactt 205
||||||||||||||||||||||
Sbjct: 141 aataagacgagtggtcaaactt 162
>RF01062;MIR812;ABXC01001803.1/39100-38927 4558:Sorghum bicolor
(sorghum)
Length = 174
Score = 75.8 bits (38), Expect = 3e-13
Identities = 125/152 (82%), Gaps = 3/152 (1%)
Strand = Plus / Minus
Query: 55 tcaagtttgcccactcgtcttattaaaaaatttgatgcaaaatatc-acttcttttgttg 113
||||||||| ||||||||||||| ||||||||| | |||||||| | || ||||| |
Sbjct: 163 tcaagtttgatcactcgtcttatttaaaaatttg-tacaaaatatttattttttttgacg 105
Query: 114 tggcttgctttattaatagaagttcttcaagattgacttaaatttgacgacatttgcaca 173
| ||||| |||||||||| || |||||||||| ||||||||||||||| | |||| || |
Sbjct: 104 tcgcttggtttattaataaaaattcttcaagaatgacttaaatttgactatatttccata 45
Query: 174 aannnnnnngaataagacgagtggtcaaactt 205
|| |||||||||||||||||||||||
Sbjct: 44 aa-ttttttgaataagacgagtggtcaaactt 14
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaacttggggtcaaaaaag 218
||||||||||||| ||||||||| ||||||||||
Sbjct: 140 aataagacgagtgatcaaacttgatgtcaaaaaag 174
>RF01062;MIR812;ABXC01004562.1/9685-9513 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 91/107 (85%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcac-ttcttttgttgt 114
|||||||| ||| |||||||||||||||||||| |||||||| | || || |||||| |
Sbjct: 161 caagtttgaccattcgtcttattaaaaaatttg-tgcaaaattttacttttttttgtcat 103
Query: 115 ggcttgctttattaatagaagttcttcaagattgacttaaatttgac 161
| |||| |||| ||||| ||||||| |||| |||||||||||||||
Sbjct: 102 gacttggtttactaataaaagttctacaagcatgacttaaatttgac 56
>RF01062;MIR812;ABXC01005003.1/74776-74603 4558:Sorghum bicolor
(sorghum)
Length = 174
Score = 69.9 bits (35), Expect = 2e-11
Identities = 84/101 (83%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 106 ttttgttgtggcttgctttattaatagaagttcttcaagattgacttaaatttgacgaca 165
|||||||||| ||| |||||||||| ||||||||||| | ||| ||||||||||| | |
Sbjct: 112 ttttgttgtgtattggtttattaataaaagttcttcaaaaatgatttaaatttgactata 53
Query: 166 tttgcacaaannnnnnngaataagacgagtggtcaaacttg 206
|||| ||||| ||||||||||||||||||||||||
Sbjct: 52 tttgtacaaa-gtttttgaataagacgagtggtcaaacttg 13
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 tcaagtttgcccactcgtcttattaaaaaa 84
||||||||| |||||||||||||| |||||
Sbjct: 12 tcaagtttgaccactcgtcttattcaaaaa 41
>RF01062;MIR812;ABXC01002978.1/127522-127699 4558:Sorghum bicolor
(sorghum)
Length = 178
Score = 67.9 bits (34), Expect = 7e-11
Identities = 94/111 (84%), Gaps = 6/111 (5%)
Strand = Plus / Minus
Query: 56 caagtttgcccactcgtcttattaaaaaatttgatgcaaaatatcact----tctttt-g 110
|||||||| ||| |||||||||| |||| ||| ||||||||| ||||| |||||| |
Sbjct: 166 caagtttgaccattcgtcttattcaaaatttt-atgcaaaatgtcactattttctttttg 108
Query: 111 ttgtggcttgctttattaatagaagttcttcaagattgacttaaatttgac 161
|||||| ||| |||||||||| ||||||| ||||| ||||||||||||||
Sbjct: 107 ttgtggtttggtttattaataaaagttctacaagaacgacttaaatttgac 57
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 tcaagtttgcccactcgtcttattaaaaaa 84
||||||||| |||||||||||||| |||||
Sbjct: 12 tcaagtttgaccactcgtcttattcaaaaa 41
>RF01058;MIR806;AAAA02003762.1/8891-8652 39946:Oryza sativa Indica
Group
Length = 240
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaatttg 88
||||| ||||||||||||||||||||||||
Sbjct: 190 gtttgaccactcgtcttattaaaaaatttg 161
>RF01062;MIR812;AAAA02030099.1/1816-1987 39946:Oryza sativa Indica
Group
Length = 172
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaatttgatgcaaa 95
||||| |||||||||||||||||||| || |||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaaatttatgcaaa 52
>RF01062;MIR812;AP008208.1/19779845-19780010 39947:Oryza sativa
Japonica Group
Length = 166
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaattt 87
||||| |||||||||||||||||||||||
Sbjct: 14 gtttgaccactcgtcttattaaaaaattt 42
>RF01062;MIR812;AAAA02041948.1/2219-2054 39946:Oryza sativa Indica
Group
Length = 166
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaatttgatgcaaa 95
||||| |||||||||||||| |||||||| |||||||
Sbjct: 14 gtttgaccactcgtcttattcaaaaattttatgcaaa 50
>RF01062;MIR812;AACV01018193.1/34010-34180 39947:Oryza sativa
Japonica Group
Length = 171
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaattt 87
||||| |||||||||||||||||||||||
Sbjct: 156 gtttgaccactcgtcttattaaaaaattt 128
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaatttg 88
||||| |||||||||||||| |||||||||
Sbjct: 16 gtttgaccactcgtcttattcaaaaatttg 45
>RF01058;MIR806;AAAA02029213.1/40556-40321 39946:Oryza sativa Indica
Group
Length = 236
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaatttgatgcaaa 95
||||| ||| ||||||||||||||||||| |||||||
Sbjct: 187 gtttgaccattcgtcttattaaaaaattttatgcaaa 151
>RF01058;MIR806;AACV01007258.1/13217-12976 39947:Oryza sativa
Japonica Group
Length = 242
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaatttgatgcaaa 95
||||| |||||||||||||| |||||||| |||||||
Sbjct: 193 gtttgaccactcgtcttattcaaaaattttatgcaaa 157
>RF01058;MIR806;AP008214.1/15639424-15639183 39947:Oryza sativa
Japonica Group
Length = 242
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaattt 87
||||| |||||||||||||||||||||||
Sbjct: 51 gtttgaccactcgtcttattaaaaaattt 79
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaatttg 88
||||| |||||||||||||| |||||||||
Sbjct: 191 gtttgaccactcgtcttattcaaaaatttg 162
>RF01062;MIR812;ABXC01006208.1/52786-52612 4558:Sorghum bicolor
(sorghum)
Length = 175
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 183 gaataagacgagtggtcaaacttg 206
||||||||||||||||||||||||
Sbjct: 36 gaataagacgagtggtcaaacttg 13
Score = 48.1 bits (24), Expect = 6e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 114 tggcttgctttattaatagaagttcttcaagattgacttaaatttgac 161
||||||| ||||||||| ||||| ||||| | |||||||||||||||
Sbjct: 104 tggcttggtttattaattaaagtttttcaataatgacttaaatttgac 57
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 tcaagtttgcccactcgtcttattaaaaaa 84
||||||||| |||||||||||||| |||||
Sbjct: 12 tcaagtttgaccactcgtcttattcaaaaa 41
>RF01062;MIR812;AAAA02036366.1/6810-6639 39946:Oryza sativa Indica
Group
Length = 172
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 60 tttgcccactcgtcttattaaaaaatttgatgcaaa 95
|||| ||| ||||||||||||||||||| |||||||
Sbjct: 17 tttgaccattcgtcttattaaaaaattttatgcaaa 52
>RF01062;MIR812;AAAA02014521.1/2699-2528 39946:Oryza sativa Indica
Group
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 183 gaataagacgagtggtcaaactt 205
|||||||||||||||||||||||
Sbjct: 36 gaataagacgagtggtcaaactt 14
>RF01062;MIR812;AACV01017232.1/78187-78355 39947:Oryza sativa
Japonica Group
Length = 169
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 58 agtttgcccactcgtcttattaaaaaa 84
|||||| ||||||||||||||||||||
Sbjct: 155 agtttgaccactcgtcttattaaaaaa 129
>RF01058;MIR806;AP008208.1/21166183-21165939 39947:Oryza sativa
Japonica Group
Length = 245
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 65 ccactcgtcttattaaaaaatttgatgcaaa 95
|||||||||||||| |||||||| |||||||
Sbjct: 185 ccactcgtcttattcaaaaattttatgcaaa 155
>RF01058;MIR806;AAAA02032415.1/3027-2786 39946:Oryza sativa Indica
Group
Length = 242
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaat 85
||||| |||||||||||||||||||||
Sbjct: 192 gtttgaccactcgtcttattaaaaaat 166
>RF01062;MIR812;AAAA02005623.1/15399-15573 39946:Oryza sativa
Indica Group
Length = 175
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
>RF01062;MIR812;ABRL01000382.1/14660-14825 65489:Oryza barthii
Length = 166
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tttgcccactcgtcttattaaaaaat 85
|||| |||||||||||||||||||||
Sbjct: 17 tttgaccactcgtcttattaaaaaat 42
>RF01062;MIR812;AAAA02001342.1/29453-29286 39946:Oryza sativa
Indica Group
Length = 168
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
>RF01062;MIR812;AAAA02023656.1/10695-10858 39946:Oryza sativa Indica
Group
Length = 164
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 151 gtttgaccactcgtcttattaaaaaa 126
>RF01062;MIR812;AAAA02033648.1/11539-11708 39946:Oryza sativa
Indica Group
Length = 170
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttggccactcgtcttattaaaaaa 41
>RF01062;MIR812;AACV01004998.1/38496-38660 39947:Oryza sativa
Japonica Group
Length = 165
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 150 gtttgaccactcgtcttattaaaaaa 125
>RF01062;MIR812;AAAA02031835.1/1391-1563 39946:Oryza sativa Indica
Group
Length = 173
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
>RF01062;MIR812;AP003347.3/33179-33351 39947:Oryza sativa Japonica
Group
Length = 173
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
>RF01062;MIR812;AAAA02010958.1/12937-13105 39946:Oryza sativa Indica
Group
Length = 169
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 154 gtttgaccactcgtcttattaaaaaa 129
>RF01062;MIR812;AAAA02003575.1/34784-34953 39946:Oryza sativa
Indica Group
Length = 170
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
>RF01062;MIR812;AC120983.6/43339-43170 39947:Oryza sativa Japonica
Group
Length = 170
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 155 gtttgaccactcgtcttattaaaaaa 130
>RF01062;MIR812;AACV01017501.1/14504-14336 39947:Oryza sativa
Japonica Group
Length = 169
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 154 gtttgaccactcgtcttattaaaaaa 129
>RF01062;MIR812;AACV01012769.1/40584-40423 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 147 gtttgaccactcgtcttattaaaaaa 122
>RF01062;MIR812;AACV01008142.1/10694-10533 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
>RF01062;MIR812;AAAA02022100.1/1294-1126 39946:Oryza sativa Indica
Group
Length = 169
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 155 gtttgaccactcgtcttattaaaaaa 130
>RF01062;MIR812;AACV01010001.1/13475-13303 39947:Oryza sativa
Japonica Group
Length = 173
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
>RF01062;MIR812;AAAA02013562.1/28796-28969 39946:Oryza sativa
Indica Group
Length = 174
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
>RF01062;MIR812;AAAA02017180.1/5982-6152 39946:Oryza sativa Indica
Group
Length = 171
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 156 gtttgaccactcgtcttattaaaaaa 131
>RF01062;MIR812;AP008215.1/22501411-22501583 39947:Oryza sativa
Japonica Group
Length = 173
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaactt 205
||||||||||||||||||||||
Sbjct: 139 aataagacgagtggtcaaactt 160
>RF01062;MIR812;AAAA02033452.1/2719-2889 39946:Oryza sativa Indica
Group
Length = 171
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaatttg 88
||||| || |||||||||||||||||||||
Sbjct: 16 gtttgaccgctcgtcttattaaaaaatttg 45
>RF01062;MIR812;AACV01020977.1/6837-7003 39947:Oryza sativa Japonica
Group
Length = 167
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 183 gaataagacgagtggtcaaact 204
||||||||||||||||||||||
Sbjct: 36 gaataagacgagtggtcaaact 15
>RF01062;MIR812;AAAA02010953.1/28204-28371 39946:Oryza sativa
Indica Group
Length = 168
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 153 gtttgaccactcgtcttattaaaaaa 128
>RF01062;MIR812;AACV01006708.1/2231-2403 39947:Oryza sativa Japonica
Group
Length = 173
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 158 gtttgaccactcgtcttattaaaaaa 133
>RF01062;MIR812;AAAA02020988.1/38602-38431 39946:Oryza sativa
Indica Group
Length = 172
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaatttg 88
||||| |||||| |||||||||||||||||
Sbjct: 16 gtttgaccactcatcttattaaaaaatttg 45
>RF01062;MIR812;AP008216.1/8863369-8863537 39947:Oryza sativa
Japonica Group
Length = 169
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 154 gtttgaccactcgtcttattaaaaaa 129
>RF01062;MIR812;AAAA02026799.1/4011-3844 39946:Oryza sativa Indica
Group
Length = 168
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 153 gtttgaccactcgtcttattaaaaaa 128
>RF01062;MIR812;AAAA02017215.1/4973-4808 39946:Oryza sativa Indica
Group
Length = 166
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
>RF01062;MIR812;AAAA02032693.1/4647-4480 39946:Oryza sativa Indica
Group
Length = 168
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 155 gtttgaccactcgtcttattaaaaaa 130
>RF01062;MIR812;AP008211.1/27689055-27689225 39947:Oryza sativa
Japonica Group
Length = 171
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
>RF01062;MIR812;AACV01011974.1/20216-20385 39947:Oryza sativa
Japonica Group
Length = 170
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattaaaaaa 41
>RF01058;MIR806;AAAA02017215.1/4773-5008 39946:Oryza sativa Indica
Group
Length = 236
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 186 gtttgaccactcgtcttattaaaaaa 161
>RF01058;MIR806;AP005912.3/106817-106576 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 gtttgcccactcgtcttattaaaaaa 84
||||| ||||||||||||||||||||
Sbjct: 51 gtttgaccactcgtcttattaaaaaa 76
>RF01058;MIR806;AP004993.3/124207-123967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 66 cactcgtcttattaaaaaatttgatgcaaa 95
||||||||||||| |||||||| |||||||
Sbjct: 185 cactcgtcttattcaaaaattttatgcaaa 156
>RF00906;MIR1122;AY761662.1/398-280 4558:Sorghum bicolor (sorghum)
Length = 119
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 221 aaacgaactataatttggaatggagg 246
||||| ||||||||||||||||||||
Sbjct: 35 aaacggactataatttggaatggagg 10
