miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 56.0 bits (28), Expect = 4e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtgttgtttt 48
|||||||||||||||||||||||||| |||||
Sbjct: 2 tactccctccgtcccaaaataagtgtagtttt 33
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 16 gtactccctccgtcccaaaataagtgt 42
|||||||||||||||||||||||||||
Sbjct: 102 gtactccctccgtcccaaaataagtgt 76
Score = 52.0 bits (26), Expect = 6e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 13 catgtactccctccgtcccaaaataagtgt 42
||||||||||||||||| ||||||||||||
Sbjct: 1 catgtactccctccgtctcaaaataagtgt 30
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa
Japonica Group
Length = 246
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 gtactccctccgtcccaaaataagtg 41
||||||||||||||||||||||||||
Sbjct: 1 gtactccctccgtcccaaaataagtg 26
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgt 76
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 gtactccctccgtcccaaaataagtgt 42
||||||| |||||||||||||||||||
Sbjct: 4 gtactccttccgtcccaaaataagtgt 30
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 323 acacttactttgggacggagggagtat 349
||||||| |||||||||||||||||||
Sbjct: 76 acacttattttgggacggagggagtat 102
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgt 30
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgt 75
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 323 acacttactttgggacggagggagtat 349
||||||| |||||||||||||||||||
Sbjct: 30 acacttattttgggacggagggagtat 4
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 323 acacttactttgggacggagggagtat 349
||||||| |||||||||||||||||||
Sbjct: 75 acacttattttgggacggagggagtat 101
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgt 30
Score = 48.1 bits (24), Expect = 9e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 15 tgtactccctccgtcccaaaataagtgt 42
|||||||||||| |||||||||||||||
Sbjct: 103 tgtactccctccatcccaaaataagtgt 76
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 323 acacttactttgggacggagggagtat 349
||||||| |||||||||||||||||||
Sbjct: 30 acacttattttgggacggagggagtat 4
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 16 gtactccctccgtcccaaaataagtg 41
||||||||||||||||||||||||||
Sbjct: 112 gtactccctccgtcccaaaataagtg 87
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 16 gtactccctccgtcccaaaataagtg 41
||||||||||||||||||||||||||
Sbjct: 112 gtactccctccgtcccaaaataagtg 87
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 catgtactccctccgtcccaaaa 35
|||||||||||||||||||||||
Sbjct: 1 catgtactccctccgtcccaaaa 23
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgt 30
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgt 76
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 323 acacttactttgggacggagggagtat 349
||||||| |||||||||||||||||||
Sbjct: 76 acacttattttgggacggagggagtat 102
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgt 30
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgt 30
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 323 acacttactttgggacggagggagtat 349
||||||| |||||||||||||||||||
Sbjct: 30 acacttattttgggacggagggagtat 4
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgt 30
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 323 acacttactttgggacggagggagtat 349
||||||| |||||||||||||||||||
Sbjct: 30 acacttattttgggacggagggagtat 4
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgt 30
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||||
Sbjct: 102 tactccctccgtcccaaaataagtgt 77
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 323 acacttactttgggacggagggagtat 349
||||||| |||||||||||||||||||
Sbjct: 77 acacttattttgggacggagggagtat 103
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgt 30
>RF01058;MIR806;ABXC01000117.1/227422-227180 4558:Sorghum bicolor
(sorghum)
Length = 243
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 16 gtactccctccgtcccaaaataagtgttgttttagaa 52
|||||||||||||||||||| ||||| |||||||||
Sbjct: 1 gtactccctccgtcccaaaaagagtgtcgttttagaa 37
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 244 tactccctccgtcccaaaataagtg 220
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 245 tactccctccgtcccaaaataagtg 221
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 112 tactccctccgtcccaaaataagtg 88
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtg 76
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 14 atgtactccctccgtcccaaaataagtgt 42
|||||||||||| ||||||||||||||||
Sbjct: 105 atgtactccctcggtcccaaaataagtgt 77
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 14 atgtactccctccgtcccaaaataa 38
|||||||||||||||||||||||||
Sbjct: 104 atgtactccctccgtcccaaaataa 80
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 324 cacttactttgggacggagggagtatg 350
|||||| ||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtatg 3
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 324 cacttactttgggacggagggagtatgta 352
|||||| ||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtatgta 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtg 41
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 13 catgtactccctccgtcccaaaata 37
|||||||||||||||||||||||||
Sbjct: 122 catgtactccctccgtcccaaaata 98
>RF01058;MIR806;ABXC01006731.1/44817-44575 4558:Sorghum bicolor
(sorghum)
Length = 243
Score = 48.1 bits (24), Expect = 9e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagtgttgttttagaa 52
||||||||||||||||||| ||||| |||||||||
Sbjct: 2 tactccctccgtcccaaaaagagtgtcgttttagaa 37
>RF01058;MIR806;ABXC01001640.1/20344-20113 4558:Sorghum bicolor
(sorghum)
Length = 232
Score = 48.1 bits (24), Expect = 9e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataagtgttgttttagaa 52
||||||||||||||||||| ||||| |||||||||
Sbjct: 231 tactccctccgtcccaaaaagagtgtcgttttagaa 196
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 48.1 bits (24), Expect = 9e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 ctccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgt 30
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 48.1 bits (24), Expect = 9e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 ctccctccgtcccaaaataagtgt 42
||||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgt 30
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 48.1 bits (24), Expect = 9e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 catgtactccctccgtcccaaaat 36
||||||||||||||||||||||||
Sbjct: 1 catgtactccctccgtcccaaaat 24
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 48.1 bits (24), Expect = 9e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 tgtactccctccgtcccaaaataa 38
||||||||||||||||||||||||
Sbjct: 103 tgtactccctccgtcccaaaataa 80
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 9e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataagt 40
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 9e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 16 gtactccctccgtcccaaaataag 39
||||||||||||||||||||||||
Sbjct: 94 gtactccctccgtcccaaaataag 71
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 326 cttactttgggacggagggagtatgta 352
|||| ||||||||||||||||||||||
Sbjct: 27 cttattttgggacggagggagtatgta 1
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataag 39
|||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataag 27
>RF00906;MIR1122;AAAA02011966.1/4807-4962 39946:Oryza sativa Indica
Group
Length = 156
Score = 48.1 bits (24), Expect = 9e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 14 atgtactccctccgtcccaaaata 37
||||||||||||||||||||||||
Sbjct: 155 atgtactccctccgtcccaaaata 132
>RF00906;MIR1122;AACV01003177.1/25234-25117 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 9e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 atgtactccctccgtcccaaaata 37
||||||||||||||||||||||||
Sbjct: 2 atgtactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 9e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 14 atgtactccctccgtcccaaaata 37
||||||||||||||||||||||||
Sbjct: 111 atgtactccctccgtcccaaaata 88
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataag 39
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataag 24
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccaaaataag 39
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataag 24
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 gtactccctccgtcccaaaataa 38
|||||||||||||||||||||||
Sbjct: 237 gtactccctccgtcccaaaataa 215
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccaaaataag 39
|||||||||||||||||||||||
Sbjct: 239 tactccctccgtcccaaaataag 217
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tccctccgtcccaaaataagtgt 42
|||||||||||||||||||||||
Sbjct: 8 tccctccgtcccaaaataagtgt 30
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 gtactccctccgtcccaaaataa 38
|||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaataa 26
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 gtactccctccgtcccaaaataa 38
|||||||||||||||||||||||
Sbjct: 116 gtactccctccgtcccaaaataa 94
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 14 atgtactccctccgtcccaaaat 36
|||||||||||||||||||||||
Sbjct: 135 atgtactccctccgtcccaaaat 113
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 gtactccctccgtcccaaaataagtgt 42
|||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgtctcaaaataagtgt 30
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 gtactccctccgtcccaaaataa 38
|||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 gtactccctccgtcccaaaataa 38
|||||||||||||||||||||||
Sbjct: 110 gtactccctccgtcccaaaataa 88
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 gtactccctccgtcccaaaataa 38
|||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaataa 26
>RF00906;MIR1122;AACV01021306.1/37655-37776 39947:Oryza sativa
Japonica Group
Length = 122
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 tgtactccctccgtcccaaaata 37
|||||||||||||||||||||||
Sbjct: 120 tgtactccctccgtcccaaaata 98
>RF00906;MIR1122;AAAA02006215.1/494-605 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 tgtactccctccgtcccaaaata 37
|||||||||||||||||||||||
Sbjct: 110 tgtactccctccgtcccaaaata 88
>RF00906;MIR1122;AAAA02012151.1/19064-18908 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 tgtactccctccgtcccaaaata 37
|||||||||||||||||||||||
Sbjct: 155 tgtactccctccgtcccaaaata 133
>RF00906;MIR1122;AAAA02034673.1/6609-6720 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 tgtactccctccgtcccaaaata 37
|||||||||||||||||||||||
Sbjct: 110 tgtactccctccgtcccaaaata 88
>RF00906;MIR1122;AP008209.1/11046117-11046191 39947:Oryza sativa
Japonica Group
Length = 75
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 13 catgtactccctccgtcccaaaa 35
|||||||||||||||||||||||
Sbjct: 75 catgtactccctccgtcccaaaa 53
>RF00906;MIR1122;AP008209.1/27314174-27314047 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 tgtactccctccgtcccaaaata 37
|||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01002422.1/2768-2895 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 13 catgtactccctccgtcccaaaa 35
|||||||||||||||||||||||
Sbjct: 128 catgtactccctccgtcccaaaa 106
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 gtactccctccgtcccaaaataa 38
|||||||||||||||||||||||
Sbjct: 94 gtactccctccgtcccaaaataa 72
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 gtactccctccgtcccaaaataa 38
|||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaataa 26
