miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 97 atctagataaatctaagtcaactaatttgggtcggagggagtagaac 143
||||||| ||||| ||| ||| |||||||| |||||||||||||||
Sbjct: 89 atctagacaaatccaagacaagtaatttggaacggagggagtagaac 135
>RF00906;MIR1122;FJ394373.1/383-480 4573:Aegilops speltoides
Length = 98
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 105 aaatctaagtcaactaatttgggtcggagggagta 139
||||||||| ||||||||| ||| |||||||||||
Sbjct: 60 aaatctaaggcaactaattcgggacggagggagta 94
>RF00906;MIR1122;EF567062.1/42666-42586 4565:Triticum aestivum
(bread wheat)
Length = 81
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 114 tcaactaatttgggtcggagggagtagaac 143
|||| |||||||| ||||||||||||||||
Sbjct: 52 tcaattaatttggatcggagggagtagaac 81
