miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;ABQO010904324.1/224-129 9315:Macropus eugenii
(tammar wallaby)
Length = 96
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 acgatgatgatgatgataatga 40
||||||||||||||||||||||
Sbjct: 12 acgatgatgatgatgataatga 33
>RF01059;mir-598;AALT01134391.1/1298-1203 42254:Sorex araneus
(European shrew)
Length = 96
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 gatgatgatgatgataatgagg 42
||||||||||||||||||||||
Sbjct: 35 gatgatgatgatgataatgagg 56
>RF01059;mir-598;CAAK05056536.1/26992-27093 7955:Danio rerio
(zebrafish)
Length = 102
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 acgatgatgatgatgataatga 40
||||||||||||||||||||||
Sbjct: 6 acgatgatgatgatgataatga 27
>RF01059;mir-598;ABEP02009992.1/7698-7571 7739:Branchiostoma
floridae (Florida lancelet)
Length = 128
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 acgatgatgatgatgataatga 40
||||||||||||||||||||||
Sbjct: 18 acgatgatgatgatgataatga 39
>RF01059;mir-598;AAZO01005637.1/34304-34404 121224:Pediculus
humanus corporis (human body louse)
Length = 101
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 acgatgatgatgatgataatga 40
||||||||||||||||||||||
Sbjct: 6 acgatgatgatgatgataatga 27
>RF01059;mir-598;AAZO01004886.1/650-735 121224:Pediculus humanus
corporis (human body louse)
Length = 86
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 acgatgatgatgatgataatga 40
||||||||||||||||||||||
Sbjct: 6 acgatgatgatgatgataatga 27
>RF01059;mir-598;AAGE02018545.1/6795-6885 7159:Aedes aegypti
(yellow fever mosquito)
Length = 91
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 gagtacgatgatgatgatgata 36
||||||||||||||||||||||
Sbjct: 90 gagtacgatgatgatgatgata 69
