miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;ABXC01004204.1/1140-1015 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 agccaaggatgacttgcctacac 65
|||||||||||||||||||||||
Sbjct: 105 agccaaggatgacttgcctacac 83
>RF00645;MIR169_2;ABXC01004204.1/1022-1134 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgcctacac 65
|||||||||||||||||||||||
Sbjct: 15 agccaaggatgacttgcctacac 37
>RF00865;MIR169_5;ABXC01004203.1/1754-1629 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 agccaaggatgacttgcctaca 64
||||||||||||||||||||||
Sbjct: 105 agccaaggatgacttgcctaca 84
>RF00645;MIR169_2;AARH01011492.1/38551-38428 3694:Populus
trichocarpa
Length = 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 39 attcagccaaggatgacttgcc 60
||||||||||||||||||||||
Sbjct: 9 attcagccaaggatgacttgcc 30
>RF00645;MIR169_2;AARH01010231.1/110431-110554 3694:Populus
trichocarpa
Length = 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 39 attcagccaaggatgacttgcc 60
||||||||||||||||||||||
Sbjct: 9 attcagccaaggatgacttgcc 30
>RF00645;MIR169_2;AASG02000866.1/18426-18322 3988:Ricinus communis
(castor bean)
Length = 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 39 attcagccaaggatgacttgcc 60
||||||||||||||||||||||
Sbjct: 9 attcagccaaggatgacttgcc 30
>RF00645;MIR169_2;ABXC01004203.1/1636-1748 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgcctaca 64
||||||||||||||||||||||
Sbjct: 15 agccaaggatgacttgcctaca 36
