miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 125 bits (63), Expect = 2e-28
Identities = 106/119 (89%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 15 atactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagt 74
||||||||||||||||||| |||||||| ||| || |||||||||||||||||||||||
Sbjct: 122 atactccctccgtccggaattatttgtcatagaaatggatgtatctagacgtattttagt 63
Query: 75 tctagatacatcc-tttttatccatttcgaagacaagtatttctggacggaggtagtat 132
||||||||||||| ||| | ||||||| || |||||||| ||| ||||||||| |||||
Sbjct: 62 tctagatacatccatttctttccattttgacgacaagtacttccggacggagggagtat 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 aaatactccctccgtccggaaatatttgtc 42
||||||||||||||||||||| || |||||
Sbjct: 2 aaatactccctccgtccggaagtacttgtc 31
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 117 bits (59), Expect = 4e-26
Identities = 105/119 (88%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 15 atactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagt 74
|||||||||||||||| || |||||||| ||| || |||||||||||||||||||||||
Sbjct: 4 atactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagt 63
Query: 75 tctagatacatcc-tttttatccatttcgaagacaagtatttctggacggaggtagtat 132
||||||||||||| |||||||||||||| ||||||| ||| ||||||||| |||||
Sbjct: 64 tctagatacatccatttttatccatttctgcaacaagtagttccggacggagggagtat 122
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 113 bits (57), Expect = 7e-25
Identities = 102/117 (87%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
||||||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgtcctagagatgaatgtatctagacttattttagtt 61
Query: 76 ctagatacatcctttttatccatttcgaagacaagtatttctggacggaggtagtat 132
||||||||||| | ||||||||| | |||||||||||| ||||||||| |||||
Sbjct: 60 atagatacatccaatatatccatttttaggacaagtatttccggacggagggagtat 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 atactccctccgtccggaaatatttgtc 42
|||||||||||||||||||||| |||||
Sbjct: 4 atactccctccgtccggaaatacttgtc 31
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 111 bits (56), Expect = 3e-24
Identities = 105/120 (87%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 14 aatactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttag 73
||||||||||||||||||||||| ||||| | || |||||||||||| |||||||||
Sbjct: 123 aatactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttag 64
Query: 74 ttctagatacatcc-tttttatccatttcgaagacaagtatttctggacggaggtagtat 132
|||||||||||||| ||||||| |||||| | ||||||||||| ||||||||| |||||
Sbjct: 63 ttctagatacatccatttttatgcatttctacgacaagtattttgggacggagggagtat 4
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 109 bits (55), Expect = 1e-23
Identities = 104/119 (87%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
||||||||| ||||||||||| ||||| || || |||||| |||||||||||||||||
Sbjct: 121 tactccctctgtccggaaatacttgtcagaggaatggatgtacctagacgtattttagtt 62
Query: 76 ctagatacatcc-tttttatccatttcgaagacaagtatttctggacggaggtagtata 133
|||||||||||| ||||||| |||||| |||||||||||| ||||||||| ||||||
Sbjct: 61 ctagatacatccatttttatgcatttctccgacaagtatttcaggacggagggagtata 3
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 107 bits (54), Expect = 4e-23
Identities = 103/118 (87%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
||||||||||||||||||||| ||||| | || |||||||||||| |||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagtt 64
Query: 76 ctagatacatcc-tttttatccatttcgaagacaagtatttctggacggaggtagtat 132
|||||||||||| ||||||| |||||| | ||||||||||| ||||||||| |||||
Sbjct: 65 ctagatacatccatttttatgcatttctacgacaagtattttgggacggagggagtat 122
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 101 bits (51), Expect = 2e-21
Identities = 103/119 (86%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 15 atactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagt 74
|||||||||| ||||||||||||||||| || || |||||||||||| ||||||||||
Sbjct: 4 atactccctctgtccggaaatatttgtcataggaatggatgtatctagatgtattttagt 63
Query: 75 tctagatacatcc-tttttatccatttcgaagacaagtatttctggacggaggtagtat 132
|||||||| |||| ||||||||||||| |||||||| ||| ||||||||| |||||
Sbjct: 64 tctagatatatccatttttatccatttgtgtgacaagtaattccggacggagggagtat 122
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 97.6 bits (49), Expect = 4e-20
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
|||||||||||| |||||||| ||||| | | || |||||||||||| ||||||||||
Sbjct: 120 tactccctccgttcggaaatacttgtcctaaaaatgaatgtatctagacttattttagtt 61
Query: 76 ctagatacatcctttttatccatttcgaagacaagtatttctggacggaggtagtat 132
|||||||||| || ||| |||||| | |||||||||||||||||||||| |||||
Sbjct: 60 atagatacatctattatattcatttctaggacaagtatttctggacggagggagtat 4
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 95.6 bits (48), Expect = 2e-19
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
||||||||||||||| ||||| |||||| ||| || ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtctgagaaattgatgtatctagacgtattttagtt 64
Query: 76 ctagataca-tcctttttatccatttcg 102
||| ||||| || |||| ||||||||||
Sbjct: 65 ctaaatacattcattttaatccatttcg 92
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 89.7 bits (45), Expect = 9e-18
Identities = 88/101 (87%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
||||||||| ||||| ||||| ||||| ||||| | |||||||||| |||||||||||
Sbjct: 5 tactccctctgtccgaaaatacttgtcattgagatgggtgtatctagatgtattttagtt 64
Query: 76 ctagataca-tcctttttatccatttcgaagacaagtattt 115
||||||||| || ||||||||||||| || |||||||||||
Sbjct: 65 ctagatacattcatttttatccattttgatgacaagtattt 105
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 89.7 bits (45), Expect = 9e-18
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
|||||||||||| ||||| || |||||| ||| || ||||||||||||||||||||||||
Sbjct: 111 tactccctccgttcggaattacttgtctcagaaatggatgtatctagacgtattttagtt 52
Query: 76 ctagatacatccttttt 92
||||||| |||| ||||
Sbjct: 51 ctagatagatccatttt 35
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 89.7 bits (45), Expect = 9e-18
Identities = 101/117 (86%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgt-ctaagagatagatgtatctagacgtattttagt 74
||||||||||||||||||||| |||| ||||| ||| || ||||||||| |||||||||
Sbjct: 120 tactccctccgtccggaaatacttgttctaag-gatgaatatatctagacttattttagt 62
Query: 75 tctagatacatcctttttatccatttcgaagacaagtatttctggacggaggtagta 131
| ||||||||||| || ||| |||||| |||||||||||| ||||||||| ||||
Sbjct: 61 tatagatacatccattatattcatttctgggacaagtatttccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 tactccctccgtccggaaatatttgtc 42
||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtccggaaatacttgtc 31
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 87.7 bits (44), Expect = 4e-17
Identities = 96/112 (85%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
||||||| ||||||||||||| ||||| || || |||||||||||| |||||||||||
Sbjct: 5 tactcccgccgtccggaaatacttgtcataggaatggatgtatctagatgtattttagtt 64
Query: 76 ctagatacatcc-tttttatccatttcgaagacaagtatttctggacggagg 126
|||||||||||| |||||||| |||| |||||||| |||||||| ||||
Sbjct: 65 ctagatacatccatttttatcaatttatgcgacaagtaattctggacagagg 116
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 85.7 bits (43), Expect = 1e-16
Identities = 77/87 (88%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 15 atactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagt 74
|||||||||||||||||||||| ||||| ||| || || |||||||| |||||||| |
Sbjct: 122 atactccctccgtccggaaatacttgtcggagaaatgaatctatctagatgtattttaat 63
Query: 75 tctagatacatcc-tttttatccattt 100
||||||||||||| |||||||||||||
Sbjct: 62 tctagatacatccatttttatccattt 36
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 105 gacaagtatttctggacggaggtagtatatg 135
|||||||||||| ||||||||| ||||||||
Sbjct: 95 gacaagtatttccggacggagggagtatatg 125
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 83.8 bits (42), Expect = 6e-16
Identities = 101/118 (85%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatcta-gacgtattttagt 74
||||||||||||||| ||||| ||||| || || |||||||| | || ||||||||||
Sbjct: 122 tactccctccgtccgaaaatacttgtccgaggaatggatgtatcaaagatgtattttagt 63
Query: 75 tctagatacatcc-tttttatccatttcgaagacaagtatttctggacggaggtagta 131
||||||||||||| ||| |||||||||| |||||||||||| ||||||||| ||||
Sbjct: 62 tctagatacatccatttatatccatttctgcgacaagtatttccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 tactccctccgtccggaaatatttgtc 42
||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtccggaaatacttgtc 31
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 83.8 bits (42), Expect = 6e-16
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 52 gatgtatctagacgtattttagttctagatacatc-ctttttatccatttcgaagacaag 110
|||||||||||| |||||||||||||||||||| | ||||||||||||| || |||||
Sbjct: 85 gatgtatctagatgtattttagttctagatacaccactttttatccattctgatgacaaa 26
Query: 111 tatttctggacggaggtagtat 132
|||||| ||||||||| |||||
Sbjct: 25 tatttccggacggagggagtat 4
Score = 60.0 bits (30), Expect = 8e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 13 aaatactccctccgtccggaaatatttgtc 42
||||||||||||||||||||||||||||||
Sbjct: 2 aaatactccctccgtccggaaatatttgtc 31
Score = 48.1 bits (24), Expect = 3e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 75 tctagatacatcct-ttttatccatttcgaagacaagtatttctggacggaggtagtata 133
||||||||||||| |||||| ||| | || |||||||||||| ||||||||| ||||||
Sbjct: 74 tctagatacatccccttttattcatcttgatgacaagtatttccggacggagggagtata 133
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 83.8 bits (42), Expect = 6e-16
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 50 tagatgtatctagacgtattttagttctagatacatcctttttatccatttcgaagacaa 109
||||||||||||||| ||||||| || ||||||||||| |||||| ||||| | |||||
Sbjct: 39 tagatgtatctagacttattttacttatagatacatccattttatacatttttatgacaa 98
Query: 110 gtatttctggacggaggtagta 131
||||||| ||||||||| ||||
Sbjct: 99 gtatttccggacggagggagta 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtc 42
||||||||||||||||||||| |||||
Sbjct: 120 tactccctccgtccggaaatacttgtc 94
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 81.8 bits (41), Expect = 2e-15
Identities = 97/113 (85%), Gaps = 2/113 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgta-ttttagt 74
|||||||||| |||||||||| |||| ||| ||||||||||||| ||||| |||||||
Sbjct: 121 tactccctccatccggaaatacctgtcggagaaatagatgtatctaaacgtatttttagt 62
Query: 75 tctagataca-tcctttttatccatttcgaagacaagtatttctggacggagg 126
|||||||||| || |||||| ||||||| | |||||||| ||| ||| |||||
Sbjct: 61 tctagatacattcatttttacccatttctacgacaagtaattccggatggagg 9
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 81.8 bits (41), Expect = 2e-15
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 52 gatgtatctagacgtattttagttctagatacat-cctttttatccatttcgaagacaag 110
|||||||||||| |||||||||||||| |||||| ||||||| ||||||| || ||||||
Sbjct: 85 gatgtatctagatgtattttagttctaaatacatccctttttgtccattttgatgacaag 26
Query: 111 tatttctggacggaggtagta 131
||||| ||||||||| ||||
Sbjct: 25 tattttcggacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 75 tctagatacatcct-ttttatccatttcgaagacaagtatttctggacggaggtagta 131
||||||||||||| |||||| ||||| || |||||||||||| ||||||||| ||||
Sbjct: 74 tctagatacatccccttttattcattttgatgacaagtatttccggacggagggagta 131
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 79.8 bits (40), Expect = 9e-15
Identities = 75/84 (89%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 52 gatgtatctagacgtattttagttctagatacatcc-tttttatccatttcgaagacaag 110
||||||||||||||||||||| |||||||||||||| ||||||||||||| | |||||
Sbjct: 41 gatgtatctagacgtattttacttctagatacatccatttttatccattttcca-acaag 99
Query: 111 tatttctggacggaggtagtatat 134
||||| |||| ||||| |||||||
Sbjct: 100 tatttttggatggagggagtatat 123
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 51 agatgtatctagacgtattttagttctagatacatcc-tttttatccatttcgaagacaa 109
||||||||||||| |||| |||||| |||||| |||| ||||||||||||| || |||||
Sbjct: 50 agatgtatctagatgtatattagttttagatatatccttttttatccattttgatgacaa 109
Query: 110 gtatttctggacggaggtagtat 132
||||| |||||||||| |||||
Sbjct: 110 ttatttttggacggagggagtat 132
Score = 44.1 bits (22), Expect = 5e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 75 tctagatacatc-ctttttatccatttcgaagacaagtatttctggacggaggtagta 131
|||||||||||| | |||||| |||| || |||||||||||| ||||||||| ||||
Sbjct: 62 tctagatacatctccttttatttattttgatgacaagtatttccggacggaggaagta 5
>RF00906;MIR1122;AK249975.1/2279-2156 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 77.8 bits (39), Expect = 4e-14
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 15 atactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagt 74
||||||||||| |||||||||| |||||| | | |||||||||| |||| |||||||||
Sbjct: 4 atactccctccatccggaaatacttgtcttaaaaatagatgtatgtagaattattttagt 63
Query: 75 tctagatacatcctttttatccatttcgaagacaagtatttctggacggaggtagtata 133
| || ||||| || |||||| ||||| | ||||||||||| ||||||| | ||||||
Sbjct: 64 tataaatacacccattttatttatttctaggacaagtattttcggacggatggagtata 122
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 75.8 bits (38), Expect = 1e-13
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 52 gatgtatctagacgtattttagttctagatacatc-ctttttatccatttcgaagacaag 110
||||||||||||| ||||||||||||||||||||| ||||||| || || || ||||||
Sbjct: 51 gatgtatctagacatattttagttctagatacatctctttttagtcactttgatgacaag 110
Query: 111 tatttctggacggaggtagtat 132
||||| ||||||||| |||||
Sbjct: 111 tattttcggacggagggagtat 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 75 tctagatacatcct-ttttatccatttcgaagacaagtatttctggacggaggtagtat 132
||||||||||||| |||||||||||| || |||||||||||| ||||||||| |||||
Sbjct: 62 tctagatacatccccttttatccattttgatgacaagtatttccggacggagggagtat 4
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 75.8 bits (38), Expect = 1e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 51 agatgtatctagacgtattttagttctagataca-tcctttttatccatttcgaagacaa 109
||||||||||||| |||||||| ||||||||||| || ||||||||||||| || |||||
Sbjct: 86 agatgtatctagatgtattttaattctagatacattcttttttatccattttgatgacaa 27
Query: 110 gtattt 115
||||||
Sbjct: 26 gtattt 21
Score = 63.9 bits (32), Expect = 5e-10
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 75 tctagatacatcct-ttttatccatttcgaagacaagtatttctggacggag 125
|||||||||||| | |||||||||||| || |||||||||||||||||||||
Sbjct: 74 tctagatacatcttcttttatccattttgatgacaagtatttctggacggag 125
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
|||||||||||| | ||| || ||||| || | || ||||||||||||| ||||||||||
Sbjct: 111 tactccctccgttctgaattacttgtcgaaaaaatggatgtatctagacatattttagtt 52
Query: 76 ctagatacatccttttt 92
|||||||||||| ||||
Sbjct: 51 ctagatacatccatttt 35
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 15 atactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagt 74
||||||||| |||||||||||| ||||| || || |||||||||||| ||||||||||
Sbjct: 4 atactcccttcgtccggaaatacttgtccaaagaatggatgtatctagatgtattttagt 63
Query: 75 tctagatacatcc 87
| |||||||||||
Sbjct: 64 tatagatacatcc 76
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 73.8 bits (37), Expect = 6e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 52 gatgtatctagacgtattttagttctagataca-tcctttttatccatttcgaagacaag 110
|||||||||||| |||||||||||||||||||| | ||| |||||||||| || ||||||
Sbjct: 85 gatgtatctagatgtattttagttctagatacatttcttattatccattttgatgacaag 26
Query: 111 tattt 115
|||||
Sbjct: 25 tattt 21
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/59 (86%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 75 tctagatacatcct--ttttatccatttcgaagacaagtatttctggacggaggtagta 131
||||||||||||| |||||||||||| | |||||||||||| ||||||||| ||||
Sbjct: 74 tctagatacatcccccttttatccattttggtgacaagtatttccggacggagggagta 132
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 71.9 bits (36), Expect = 2e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 53 atgtatctagacgtattttagttctagatacatc-ctttttatccatttcgaagacaagt 111
||||||||||| |||||||||||||| |||||| |||||||||||||| || |||||||
Sbjct: 84 atgtatctagatatattttagttctaggtacatctctttttatccattttgatgacaagt 25
Query: 112 attt 115
||||
Sbjct: 24 attt 21
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 71.9 bits (36), Expect = 2e-12
Identities = 96/116 (82%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
||||||||||||| | ||||| ||| | ||| || | ||||| ||||| ||||||||||
Sbjct: 120 tactccctccgtctgaaaatacttgccctagaaatggttgtatgtagacttattttagtt 61
Query: 76 ctagatacatcctttttatccatttcgaagacaagtatttctggacggaggtagta 131
|||||||||| |||||| |||||| | ||||||||||| ||||||||| ||||
Sbjct: 60 atagatacatcaattttattcatttctaggacaagtatttgcggacggagggagta 5
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 15 atactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagt 74
||||||||||||| ||||| || ||||| | || |||||||||||||||||||||||
Sbjct: 112 atactccctccgttcggaattacttgtcgcgaaaatggatgtatctagacgtattttagt 53
Query: 75 tctagatacatc 86
||||||||||||
Sbjct: 52 tctagatacatc 41
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 67.9 bits (34), Expect = 3e-11
Identities = 98/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 15 atactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagt 74
||||||| |||||||||||||| ||||| || || ||||||| ||||| |||||||||
Sbjct: 4 atactccttccgtccggaaatacttgtcgaaagaatggatgtatttagacatattttagt 63
Query: 75 tctagatacatcc-tttttatccatttcgaagacaagtatttctggacggaggtagta 131
| ||||| ||||| ||| ||| ||||| |||||||||||||| ||||||| ||||
Sbjct: 64 tttagatgcatccatttatattcatttttgcgacaagtatttctgaacggagggagta 121
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 67.9 bits (34), Expect = 3e-11
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 52 gatgtatctagacgtattttagttctagatacatc-ctttttatccatttcgaagacaag 110
|||||||||||| |||||||||||||| ||||||| |||||| | ||| | || ||||||
Sbjct: 62 gatgtatctagatgtattttagttctacatacatctctttttgttcatattgatgacaag 121
Query: 111 tatttctggacggaggtagtat 132
||||| ||||||||| |||||
Sbjct: 122 tattttcggacggagggagtat 143
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 65.9 bits (33), Expect = 1e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
||||||||||||||| ||||| ||||| || || ||| |||||||| |||||||||||
Sbjct: 111 tactccctccgtccgaaaatacttgtcattgaaatggatatatctagatgtattttagtt 52
Query: 76 ctagatacatccttttt 92
||||| |||||| ||||
Sbjct: 51 ctagacacatccatttt 35
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 53 atgtatctagacgtattttagttctagatacatcc-tttttatccatttcgaagacaagt 111
|||||| ||||||||||||||||||| |||||||| ||||||||| |||| |||||||
Sbjct: 84 atgtatttagacgtattttagttctacatacatccatttttatccgtttctccgacaagt 25
Query: 112 atttctggacggaggtagtat 132
||| || || ||||| |||||
Sbjct: 24 attcctagaaggagggagtat 4
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 52 gatgtatctagacgtattttagttctagatacatc-ctttttatccatttcgaagacaag 110
||||||| |||| |||||||||||||||||| ||| |||||| | ||||| || ||||||
Sbjct: 50 gatgtatttagatgtattttagttctagatatatctctttttgttcattttgatgacaag 109
Query: 111 tatttctggacggaggtagta 131
||||| ||||||||| ||||
Sbjct: 110 tattttcggacggagggagta 130
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 84/101 (83%)
Strand = Plus / Minus
Query: 15 atactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagt 74
|||||||| ||||||||||||| ||||| | |||| ||||||||| | |||||||||
Sbjct: 121 atactccccccgtccggaaatacttgtcctaaagatgaatgtatctaaatttattttagt 62
Query: 75 tctagatacatcctttttatccatttcgaagacaagtattt 115
| | ||||||||| || |||||||||| | ||||| |||||
Sbjct: 61 tatggatacatccattatatccatttctaggacaaatattt 21
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 65.9 bits (33), Expect = 1e-10
Identities = 100/121 (82%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 13 aaatactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtatttta 72
||||||| ||||||| |||||||| |||| | |||||| ||||||||||| |||||||
Sbjct: 2 aaatactacctccgttcggaaatacttgttttagagatgaatgtatctagatttatttta 61
Query: 73 gttctagatacatcctttttatccatttcgaagac-aagtatttctggacggaggtagta 131
|| ||||||| || || |||||||||| | ||| |||||||| ||||||||| ||||
Sbjct: 62 attatagatacttcagttatatccatttctaggacaaagtattttgggacggagggagta 121
Query: 132 t 132
|
Sbjct: 122 t 122
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 63.9 bits (32), Expect = 5e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 53 atgtatctagacgtattttagttctagatacatc-ctttttatccatttcgaagacaagt 111
|||||| |||| ||||||||||||||| |||||| ||||||||||||| || |||||||
Sbjct: 84 atgtatatagatgtattttagttctaggtacatcattttttatccattttgatgacaagt 25
Query: 112 attt 115
||||
Sbjct: 24 attt 21
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 52 gatgtatctagacgtattttagttctagatacatcc 87
|||||||||||| |||||||||||||||||||||||
Sbjct: 40 gatgtatctagatgtattttagttctagatacatcc 75
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 63.9 bits (32), Expect = 5e-10
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 52 gatgtatctagacgtattttagttctagatacatcc-tttttatccatttcgaagacaag 110
||||||| || || ||||||||||||| |||||| ||||||||||||| || ||||||
Sbjct: 51 gatgtatttaaacatattttagttctaaatacatttatttttatccattttgatgacaag 110
Query: 111 tatttctggacggaggtagtatat 134
||||| ||||||||| |||||||
Sbjct: 111 tattttcggacggagggagtatat 134
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 63.9 bits (32), Expect = 5e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
||||||||| |||| |||||| ||||| || || |||||||||||| |||||| ||||
Sbjct: 5 tactccctctgtcccgaaatacttgtcgcggaaatggatgtatctagatgtatttcagtt 64
Query: 76 ctagatacatcc 87
||||||||||||
Sbjct: 65 ctagatacatcc 76
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 52 gatgtatctagacgtattttagttctagatacatcc 87
|||||||||||| |||||||||||||||||||||||
Sbjct: 75 gatgtatctagatgtattttagttctagatacatcc 40
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 53 atgtatctagacgtattttagttctagatacatcc 87
||||||||||| |||||||||||||||||||||||
Sbjct: 74 atgtatctagatgtattttagttctagatacatcc 40
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 60.0 bits (30), Expect = 8e-09
Identities = 73/86 (84%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
|||||||||||| | ||| || | ||| |||| || ||||||||||| |||||||| ||
Sbjct: 121 tactccctccgttcagaattactcgtccaagaaatgaatgtatctagatgtattttaatt 62
Query: 76 ctagatacatcc-tttttatccattt 100
||||||||||| |||||||||||||
Sbjct: 61 gtagatacatccatttttatccattt 36
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 52 gatgtatctagacgtattttagttctagatacatccttttta 93
|||||||| ||| ||||||||||||||||||||||| |||||
Sbjct: 75 gatgtatcaagatgtattttagttctagatacatccatttta 34
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 60.0 bits (30), Expect = 8e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
|||||||||||| ||| |||| ||| ||| |||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcgaattattcgtcgcagaaatagatgtatctagttgtattttagtt 64
Query: 76 ctagatacat 85
||||||||||
Sbjct: 65 ctagatacat 74
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 19 tccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagttcta 78
||||||||| ||||| || ||||| ||| || ||||||||||||| | ||| |||||||
Sbjct: 8 tccctccgttcggaattacttgtcgtagaaatggatgtatctagacatttttcagttcta 67
Query: 79 gatacatcc 87
|||||||||
Sbjct: 68 gatacatcc 76
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 53 atgtatctagacgtattttagttctagatacat 85
||||||||||| |||||||||||||||||||||
Sbjct: 79 atgtatctagatgtattttagttctagatacat 47
>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 123
Score = 58.0 bits (29), Expect = 3e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 15 atactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagt 74
|||||||| ||||||||||||| ||||| || || |||||||||||| |||||||||
Sbjct: 120 atactccccccgtccggaaatacctgtcttcgaaatgaatgtatctagacttattttagt 61
Query: 75 tctagatacatcctttt 91
| || ||||||| ||||
Sbjct: 60 tatacatacatcatttt 44
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 58.0 bits (29), Expect = 3e-08
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 53 atgtatctagacgtattttagttctagatacatcc-tttttatccatttcgaagacaagt 111
||||||||||| ||||| || |||||||||||||| ||||||| ||||| |||||||
Sbjct: 84 atgtatctagatgtattataattctagatacatccatttttatacatttatgtgacaagt 25
Query: 112 atttctggacggaggtagtat 132
| ||| ||||||||| |||||
Sbjct: 24 aattccggacggagggagtat 4
>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
Length = 124
Score = 58.0 bits (29), Expect = 3e-08
Identities = 89/109 (81%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
|||| |||||||||||||||| ||||| | |||| |||||||||||| |||| || ||
Sbjct: 120 tactacctccgtccggaaatacttgtcctacagatgaatgtatctagacttattctaatt 61
Query: 76 ctagatacatcctttttatccatttcgaagacaagtatttctggacgga 124
||||||||||| || ||| |||| | ||||||||||| |||||||
Sbjct: 60 gtagatacatccattatatgtatttttaggacaagtattttcggacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 105 gacaagtatttctggacggaggtagta 131
|||||||||||| ||||||||||||||
Sbjct: 94 gacaagtatttccggacggaggtagta 120
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 52 gatgtatctagacgtattttagttctagatacatcc 87
|||||||||||| ||||||||||| |||||||||||
Sbjct: 41 gatgtatctagatgtattttagttatagatacatcc 76
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 52 gatgtatctagacgtattttagttctagatacatcctttttatccatttcgaagacaagt 111
|||| |||||||| |||||||||| ||||||||||| || ||| |||| | | |||||
Sbjct: 41 gatgaatctagacttattttagttatagatacatccattatatttatttttaggtcaagt 100
Query: 112 atttctggacggaggtagta 131
||||| ||||||||| ||||
Sbjct: 101 atttccggacggagggagta 120
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 53 atgtatctagacgtattttagttctagatacatccttttt 92
||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 74 atgtatctagatgtattttagttatagatacatccatttt 35
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 53 atgtatctagacgtattttagttctagatacatcc 87
|||||||||||||||||| ||| ||||||||||||
Sbjct: 74 atgtatctagacgtatttcagtgctagatacatcc 40
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 111 tatttctggacggaggtagtata 133
|||||||||||||||||||||||
Sbjct: 91 tatttctggacggaggtagtata 113
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 52 gatgtatctagacgtattttagttctagatacat 85
|||||||||||||| ||||||||||||||||||
Sbjct: 49 gatgtatctagacgagttttagttctagatacat 82
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
||||||||||||| | ||||| ||||| || || |||||||||||| | |||||||||
Sbjct: 121 tactccctccgtcagaaaatacttgtcgaaagaatggatgtatctagatgcattttagtt 62
Query: 76 ctagatacat 85
||| ||||||
Sbjct: 61 ctaaatacat 52
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 50.1 bits (25), Expect = 8e-06
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 52 gatgtatctagacgtatttt-agttctagatacatcc 87
|||||||||||||| ||||| ||||||||||||||||
Sbjct: 77 gatgtatctagacgcatttttagttctagatacatcc 41
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 50.1 bits (25), Expect = 8e-06
Identities = 95/117 (81%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 16 tactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttagtt 75
|||||||||||||||||| || ||| | | | || |||| ||||| || ||||||||||
Sbjct: 5 tactccctccgtccggaattacttgacataaaaatggatgcatctaaacatattttagtt 64
Query: 76 ctagataca-tcctttttatccatttcgaagacaagtatttctggacggaggtagta 131
||| ||||| || ||| | ||||||| | |||||||| ||| ||||||||| ||||
Sbjct: 65 ctaaatacattcatttatttccattttggtgacaagtaattccggacggagggagta 121
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 53 atgtatctagacgtattttagttctagatacat 85
||||||||||| ||||||||||||||||||||
Sbjct: 84 atgtatctagatatattttagttctagatacat 52
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 73/88 (82%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 14 aatactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttag 73
|||||| |||||||| ||||||| ||||| ||| || |||| |||||||||| |||||
Sbjct: 3 aatacttcctccgtctggaaatacttgtcggagaaatggatgcatctagacgtgctttag 62
Query: 74 ttctagatacatcc-tttttatccattt 100
|| || | |||| | |||||||||||||
Sbjct: 63 ttttatacacattcatttttatccattt 90
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgt 41
||||||||||||||||||||| ||||
Sbjct: 120 tactccctccgtccggaaatacttgt 95
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 52 gatgtatctagacgtattttagttctagatacatcc 87
|||||||||||| ||||||||||| |||||| ||||
Sbjct: 41 gatgtatctagatgtattttagttttagatatatcc 76
>RF00906;MIR1122;EU282716.1/1526-1412 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 52 gatgtatctagacgtattttagttctagatacatcc 87
||||||||||||||||||| ||| ||| ||||||||
Sbjct: 41 gatgtatctagacgtatttcagtgctaaatacatcc 76
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 49 atagatgtatctagacgtattttagttctagatac 83
|||||| |||||||| |||||||||||||| ||||
Sbjct: 78 atagatatatctagatgtattttagttctaaatac 44
>RF00906;MIR1122;FJ427399.1/11963-11864 4571:Triticum turgidum
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 89 ttttatccatttcgaagacaagtatttctggacggaggtagta 131
|||||||||||| || ||||||||||| ||||||||| ||||
Sbjct: 47 ttttatccattttgatgacaagtattttcggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 89 ttttatccatttcgaagacaagtatttctggacggaggtagta 131
|||||||||||| || ||||||||||| ||||||||| ||||
Sbjct: 54 ttttatccattttgatgacaagtattttcggacggaggaagta 96
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 141
Score = 44.1 bits (22), Expect = 5e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 14 aatactccctccgtccggaaatatttgtctaagagatagatgtatctagacgtattttag 73
||||||||||| || | ||||| ||||| ||| ||||||||||||||| ||||||||
Sbjct: 3 aatactccctctgttcataaatacttgtcctagaaatagatgtatctagatttattttag 62
Query: 74 tt 75
||
Sbjct: 63 tt 64
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgtccggaaatatttgt 41
||||||||||||||||||||| ||||
Sbjct: 137 tactccctccgtccggaaatacttgt 112
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 53 atgtatctagacgtattttagt 74
||||||||||||||||||||||
Sbjct: 42 atgtatctagacgtattttagt 63
