miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 135 bits (68), Expect = 2e-31
Identities = 143/166 (86%), Gaps = 4/166 (2%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacact-gtagattacaaacgg 71
||||||||||||||| |||||||||||||||||| ||| |||| | ||| |||| ||||
Sbjct: 163 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 104
Query: 72 agcaaaataagtgaatctacactataaagtatgtctatatacatccgccgtatgtagtcc 131
|||||||| |||||||||| ||| |||| ||||||||| ||||| |||||||||||
Sbjct: 103 agcaaaatgagtgaatctatactctaaaatatgtctatgtacat---ccgtatgtagttt 47
Query: 132 atagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
||||| ||| |||||||||| |||||||||||||| |||||||||
Sbjct: 46 atagtacaatctctaaaaggtcttatatttaggaacggagggagta 1
Score = 77.8 bits (39), Expect = 5e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataagaccttttagagatt 51
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagatt 39
Score = 63.9 bits (32), Expect = 7e-10
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 119 ccgtatgtagtc-catagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
|||||||||||| | |||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 104 ccgtatgtagtctcctagtgaaatacctaaaaggtcttatattttggaacggagggagta 163
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 135 bits (68), Expect = 2e-31
Identities = 142/166 (85%), Gaps = 3/166 (1%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacactgtagattacaaacgga 72
||||||||||||||||||||||||||||||||| | ||| |||| |||| |||| |||||
Sbjct: 163 tactccctccgttcctaaatataagaccttttacaaatttcactatagactacatacgga 104
Query: 73 gcaaaataagtgaatctacactataaagtatgtctatatacatccgccgtatgtagtcca 132
||||||| ||||||| |||| ||| |||| ||| |||||| ||||||||||| |
Sbjct: 103 gcaaaatgagtgaatttacatcccaaaatatgactacatacat---ccgtatgtagttta 47
Query: 133 tagtgaaatatctaaaaggttttatatttaggaacagagggagtag 178
|||||| || |||||||||| |||||||||||||| ||||||||||
Sbjct: 46 tagtgagatctctaaaaggtcttatatttaggaacggagggagtag 1
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 119 ccgtatgtagtccatagtgaaatatctaaaaggttttatatttaggaacagagggagtag 178
|||||||||||| |||||||||| | |||||||| |||||||||||||| ||||||||||
Sbjct: 105 ccgtatgtagtctatagtgaaatttgtaaaaggtcttatatttaggaacggagggagtag 164
Query: 179 t 179
|
Sbjct: 165 t 165
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataagaccttttagagat 50
||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatataagaccttttagagat 39
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 133 bits (67), Expect = 1e-30
Identities = 141/165 (85%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacactgtagattacaaacgga 72
||||||||||||||||||||||||||||||||||| ||| ||| | || |||| |||||
Sbjct: 5 tactccctccgttcctaaatataagaccttttagaaattctactatggactacatacgga 64
Query: 73 gcaaaataagtgaatctacactataaagtatgtctatatacatccgccgtatgtagtcca 132
||||| || | || ||| || |||| |||||||||||||||||| |||||||| ||
Sbjct: 65 acaaaacaaataaacctataccctaaaatatgtctatatacatccg---tatgtagttca 121
Query: 133 tagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
||||| |||| ||||||||| |||||||||||||| |||||||||
Sbjct: 122 tagtgtaatacctaaaaggtcttatatttaggaacggagggagta 166
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 119 ccgtatgtagtccatagtgaaatatctaaaaggttttatatttaggaacagagggagtag 178
|||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||
Sbjct: 63 ccgtatgtagtccatagtagaatttctaaaaggtcttatatttaggaacggagggagtag 4
Query: 179 tta 181
|||
Sbjct: 3 tta 1
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacact 56
|||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 166 tactccctccgttcctaaatataagaccttttaggtattacact 123
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 133 bits (67), Expect = 1e-30
Identities = 145/169 (85%), Gaps = 4/169 (2%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacact-gtagattacaaacgg 71
||||||||||||||| |||||||||||||||||| ||| |||| | ||| |||| ||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 72 agcaaaataagtgaatctacactataaagtatgtctatatacatccgccgtatgtagtcc 131
|||||||| || ||||||| ||| |||| ||||||||| |||||||| ||||||||
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccg---tatgtagttt 50
Query: 132 atagtgaaatatctaaaaggttttatatttaggaacagagggagtagtt 180
||||| ||| |||||||||| |||||||||||||| ||||||||||||
Sbjct: 49 atagtacaatctctaaaaggtcttatatttaggaacggagggagtagtt 1
Score = 77.8 bits (39), Expect = 5e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataagaccttttagagatt 51
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tactccctccgttcctaaatataagaccttttagagatt 42
Score = 56.0 bits (28), Expect = 2e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 119 ccgtatgtagtc-catagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
|||||||||||| |||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 107 ccgtatgtagtcttctagtgaaatacctaaaaggtcttatattttggaacggagggagta 166
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 125 bits (63), Expect = 2e-28
Identities = 140/165 (84%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacactgtagattacaaacgga 72
||||||||| ||||||||||||||| | ||||||||||| | | | || |||| |||||
Sbjct: 5 tactccctctgttcctaaatataagtctttttagagattctaatatggactacatacgga 64
Query: 73 gcaaaataagtgaatctacactataaagtatgtctatatacatccgccgtatgtagtcca 132
||||||| |||||||||||||| |||| || |||||||| ||| ||||||||||||||
Sbjct: 65 gcaaaatgagtgaatctacactctaaaatacgtctatattcat---ccgtatgtagtcca 121
Query: 133 tagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
|| | |||| ||||||| | |||||||||||||| |||||||||
Sbjct: 122 tattcaaatctctaaaaagacttatatttaggaacggagggagta 166
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 119 ccgtatgtagtccatagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
|||||||||||||||| | ||| ||||||| | ||||||||||||||||||||||||
Sbjct: 63 ccgtatgtagtccatattagaatctctaaaaagacttatatttaggaacagagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataagaccttttagagatt 51
||||||||||||||||||||||||| | |||||||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagatt 128
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 117 bits (59), Expect = 6e-26
Identities = 145/170 (85%), Gaps = 9/170 (5%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacactgtagat---tacaaac 69
||||||||||||||||||||||||| | ||| || |||| |||| |||| |||| ||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcact--agatgtctacatac 58
Query: 70 ggagcaaaataagtgaatctacactataaagtatgtctatatacatccgccgtatgtagt 129
|||||||||| | ||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct: 59 ggagcaaaatgattgaatgtacactctaaagtatgtctatatacat---ccgtatgtagt 115
Query: 130 cca-tagtgaaatatctaaaaggttttatatttaggaacagagggagtag 178
||| ||||||||| |||| || | |||||||||||||| ||||||||||
Sbjct: 116 ccattagtgaaatctctacaaagacttatatttaggaacggagggagtag 165
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacact 56
||||||||||||||||||||||||| | || |||||||| ||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcact 121
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 105 bits (53), Expect = 2e-22
Identities = 141/167 (84%), Gaps = 5/167 (2%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacactgta-gattacaaacgg 71
||||||||||||||||||||||||| | ||||||||||| | || | || |||| ||||
Sbjct: 164 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 105
Query: 72 agcaaaataagtgaatctacactataaagtatgtctatatacatccgccgtatgtagtcc 131
|||||||| |||||||||| | | |||| ||||||||||||||| ||| ||||||||
Sbjct: 104 agcaaaatgagtgaatctatattctaaaatatgtctatatacat---ccgaatgtagtct 48
Query: 132 a-tagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
| |||||||| ||||||| | |||||||||||||| |||||||||
Sbjct: 47 actagtgaaacctctaaaaagacttatatttaggaacggagggagta 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataagaccttttagag 48
||||||||||||||||||||||||| | ||||||||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagag 36
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 137 gaaatatctaaaaggttttatatttaggaacagagggagtag 178
||||| ||||||| | |||||||||||||| ||||||||||
Sbjct: 124 gaaatctctaaaaagacttatatttaggaacggagggagtag 165
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 101 bits (51), Expect = 3e-21
Identities = 138/165 (83%), Gaps = 4/165 (2%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacactgtagattacaaacgga 72
||||||||||||||||||||||||| | || ||||||| |||| |||| ||| |||||
Sbjct: 5 tactccctccgttcctaaatataagtctttggagagatttcactatagaccacatacgga 64
Query: 73 gcaaaataagtgaatctacactataaagtatgtctatatacatccgccgtatgtagtcca 132
| ||||| ||||||||||||| ||||| | ||||||||||| |||||||| |||||
Sbjct: 65 gaaaaatgagtgaatctacac-ataaaatgcatctatatacat---ccgtatgtggtcca 120
Query: 133 tagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
||||||||||||| | | |||||||||||||| |||||||||
Sbjct: 121 cagtgaaatatctacgaagacttatatttaggaacggagggagta 165
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 119 ccgtatgtagtccatagtgaaatatctaaaaggttttatatttaggaacagagggagtag 178
|||||||| ||| |||||||||| ||| || | |||||||||||||| ||||||||||
Sbjct: 63 ccgtatgtggtctatagtgaaatctctccaaagacttatatttaggaacggagggagtag 4
Query: 179 t 179
|
Sbjct: 3 t 3
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataag 37
|||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataag 141
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacactgtagattacaaacgga 72
||||||||||||||||||||||||| | |||||||||||||||| | || |||| |||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacactatggactacatacgga 64
Query: 73 gcaaaataagtgaatct 89
||||||| |||||||||
Sbjct: 65 gcaaaatgagtgaatct 81
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 119 ccgtatgtagtccatagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
||||||||||||||||||| ||| ||||||| | |||||||||||||| |||||||||
Sbjct: 63 ccgtatgtagtccatagtgtaatctctaaaaagacttatatttaggaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 17 ccctccgttcctaaatataagaccttttagagatt 51
||||||||||||||||||||| |||||||||||||
Sbjct: 111 ccctccgttcctaaatataagtccttttagagatt 77
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 79.8 bits (40), Expect = 1e-14
Identities = 133/165 (80%), Gaps = 8/165 (4%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacactgtagattacaaacgga 72
||||||||||||||||||||||||| | | |||||||| |||| | || |||| ||| |
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcactatggactacatacgaa 102
Query: 73 gcaaaataagtgaatctacactataaagtatgtctatatacatccgccgtatgtagtcca 132
||||||| |||||||||||||| |||| | ||||||||| ||||| |||||
Sbjct: 101 gcaaaatgagtgaatctacactctaaaatgcatctatatac--------tatgtggtcca 50
Query: 133 tagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
||||| ||| |||| || | |||||||||||||| |||||||||
Sbjct: 49 tagtggaatctctacaaagacttatatttaggaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 11 attactccctccgttcctaaatataagaccttttagagattacact 56
||||||||||||||||||||||||||| | || |||||||| ||||
Sbjct: 3 attactccctccgttcctaaatataagtctttgtagagattccact 48
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 120 cgtatgtagtccatagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
|||||||||||||||||||||| |||| | | |||||||||||||| |||||||||
Sbjct: 104 cgtatgtagtccatagtgaaatctctacagagacttatatttaggaacggagggagta 161
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 73.8 bits (37), Expect = 8e-13
Identities = 138/167 (82%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacactgtagat-tacaaacgg 71
|||||||||||||||||||| |||| | ||||||||||| | || | |||| | ||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgg 62
Query: 72 agcaaaataagtgaatctacactataaagtatgtctatatacatccgccgtatgtagt-c 130
|||||||| ||||||||| ||| ||| |||||||||||||||| ||||||||||| |
Sbjct: 63 agcaaaatgagtgaatctgtactctaa-gtatgtctatatacat---ccgtatgtagtcc 118
Query: 131 catagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
| |||||||| ||||||| | |||||||||||||| |||||||||
Sbjct: 119 cctagtgaaacttctaaaaagacttatatttaggaacggagggagta 165
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataagaccttttaga 47
||||||||||||||||||||||||| | |||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttaga 131
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 61.9 bits (31), Expect = 3e-09
Identities = 132/165 (80%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacactgtagattacaaacgga 72
||||||||||||||||||||||||| | || | ||||| || | | || ||| |||||
Sbjct: 2 tactccctccgttcctaaatataagtctttggacagatttcattatggaccacatacgga 61
Query: 73 gcaaaataagtgaatctacactataaagtatgtctatatacatccgccgtatgtagtcca 132
| ||||| |||||| ||| ||| |||| | |||| ||||||||| ||||| |||||
Sbjct: 62 gtaaaatgagtgaacctatactctaaaatgcatctacatacatccg---tatgtggtcca 118
Query: 133 tagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
||||||||| |||| || | ||||||||||||| |||||||||
Sbjct: 119 tagtgaaatctctacaaagacttatatttaggaatggagggagta 163
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacact 56
|||||||||| |||||||||||||| | || |||||||| ||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcact 120
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataagaccttttagagattacact-gtagattacaaacgg 71
||||||||||||||||||||||||| | ||| ||| ||| |||| |||| |||| ||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92
Query: 72 agcaaaat 79
||||||||
Sbjct: 91 agcaaaat 84
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataag 37
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 133 tagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
||||||||||||| ||| | |||||||||||||| |||||||||
Sbjct: 107 tagtgaaatatcttaaaagacttatatttaggaacggagggagta 151
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataaga 38
||||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataaga 51
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 154 ttatatttaggaacagagggagta 177
||||||||||||||||||||||||
Sbjct: 28 ttatatttaggaacagagggagta 5
>RF00906;MIR1122;AP008217.1/6469174-6469304 39947:Oryza sativa
Japonica Group
Length = 131
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 152 ttttatatttaggaacagagggagta 177
||||||||||||||||||||||||||
Sbjct: 30 ttttatatttaggaacagagggagta 5
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataag 37
|||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataag 114
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataag 37
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 actccctccgttcctaaatataaga 38
|||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataaga 30
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatataag 37
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;CU651629.7/82421-82568 3880:Medicago truncatula
(barrel medic)
Length = 148
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 154 ttatatttaggaacagagggagtagtta 181
|||||||||| |||||||||||||||||
Sbjct: 28 ttatatttagaaacagagggagtagtta 1
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataagacctttt 44
||||||||||||||||||||||| ||| ||||
Sbjct: 89 tactccctccgttcctaaatatatgacgtttt 58
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 tattactccctccgttcctaaatataag 37
||||||||||||||| ||||||||||||
Sbjct: 155 tattactccctccgtccctaaatataag 128
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataa 36
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa Japonica
Group
Length = 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 11 attactccctccgttcctaaatataaga 38
|||||||||||||| |||||||||||||
Sbjct: 119 attactccctccgtccctaaatataaga 92
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttactccctccgttcctaaatat 34
|||||||||||||||||||||||
Sbjct: 1 ttactccctccgttcctaaatat 23
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttactccctccgttcctaaatat 34
|||||||||||||||||||||||
Sbjct: 1 ttactccctccgttcctaaatat 23
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttactccctccgttcctaaatat 34
|||||||||||||||||||||||
Sbjct: 1 ttactccctccgttcctaaatat 23
>RF00906;MIR1122;EU282260.1/1308-1219 97361:Hordeum murinum
Length = 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 157 tatttaggaacagagggagtagt 179
|||||||||||||||||||||||
Sbjct: 25 tatttaggaacagagggagtagt 3
>RF00906;MIR1122;DQ454157.1/29550-29395 39947:Oryza sativa Japonica
Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 ttactccctccgttcctaaatataaga 38
||||||||||||| |||||||||||||
Sbjct: 153 ttactccctccgtccctaaatataaga 127
>RF00906;MIR1122;AACV01001639.1/6893-7021 39947:Oryza sativa
Japonica Group
Length = 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 ttactccctccgttcctaaatataaga 38
||||||||||||| |||||||||||||
Sbjct: 126 ttactccctccgtccctaaatataaga 100
>RF00906;MIR1122;AAAA02002822.1/13589-13717 39946:Oryza sativa
Indica Group
Length = 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 ttactccctccgttcctaaatataaga 38
||||||||||||| |||||||||||||
Sbjct: 126 ttactccctccgtccctaaatataaga 100
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatata 35
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
>RF01058;MIR806;AAAA02029566.1/13003-12764 39946:Oryza sativa Indica
Group
Length = 240
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 atatttaggaacagagggagta 177
||||||||||||||||||||||
Sbjct: 218 atatttaggaacagagggagta 239
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatat 34
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatat 34
||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatat 34
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP008207.1/40026717-40026952 39947:Oryza sativa
Japonica Group
Length = 236
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 156 atatttaggaacagagggagta 177
||||||||||||||||||||||
Sbjct: 23 atatttaggaacagagggagta 2
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatat 34
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttcctaaatat 34
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;BABK01002427.1/1342-1424 34305:Lotus japonicus
Length = 83
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 ttactccctccgttcctaaatataagacctttta 45
||||||||||||| ||| | ||||||||||||||
Sbjct: 4 ttactccctccgtcccttattataagacctttta 37
>RF00906;MIR1122;ABXC01000869.1/217-331 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 11 attactccctccgttcctaaatataagacctttt 44
||||||||||||||||| || |||||||| ||||
Sbjct: 113 attactccctccgttccaaattataagacgtttt 80
>RF00906;MIR1122;AK248235.1/1048-956 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 156 atatttaggaacagagggagta 177
||||||||||||||||||||||
Sbjct: 26 atatttaggaacagagggagta 5
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 120 cgtatgtagtccatagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
|||||||||||| ||||||||| | || || | ||||||||||||| |||||||||
Sbjct: 62 cgtatgtagtccgtagtgaaatctttagaaagacttatatttaggaaaggagggagta 5
>RF00906;MIR1122;AAAA02004745.1/46871-46769 39946:Oryza sativa
Indica Group
Length = 103
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 17 ccctccgttcctaaatataaga 38
||||||||||||||||||||||
Sbjct: 95 ccctccgttcctaaatataaga 74
>RF00906;MIR1122;AP008217.1/17033148-17033044 39947:Oryza sativa
Japonica Group
Length = 105
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 153 tttatatttaggaacagagggagtag 178
|||||||||||| |||||||||||||
Sbjct: 77 tttatatttagggacagagggagtag 102
>RF00906;MIR1122;AACV01018415.1/900-764 39947:Oryza sativa Japonica
Group
Length = 137
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 154 ttatatttaggaacagagggagtagt 179
||||||||||| ||||||||||||||
Sbjct: 28 ttatatttagggacagagggagtagt 3
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataaga 38
|||||||||||| |||||||||||||
Sbjct: 127 tactccctccgtccctaaatataaga 102
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 154 ttatatttaggaacagagggagtagt 179
||||||||||| ||||||||||||||
Sbjct: 28 ttatatttagggacagagggagtagt 3
>RF00906;MIR1122;AACV01025355.1/1742-1876 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 154 ttatatttaggaacagagggagtagt 179
||||||||||| ||||||||||||||
Sbjct: 28 ttatatttagggacagagggagtagt 3
>RF00906;MIR1122;AAAA02001165.1/17166-17008 39946:Oryza sativa
Indica Group
Length = 159
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataaga 38
|||||||||||| |||||||||||||
Sbjct: 155 tactccctccgtccctaaatataaga 130
>RF00906;MIR1122;AACV01023140.1/37073-36969 39947:Oryza sativa
Japonica Group
Length = 105
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 153 tttatatttaggaacagagggagtag 178
|||||||||||| |||||||||||||
Sbjct: 77 tttatatttagggacagagggagtag 102
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataaga 38
|||||||||||| |||||||||||||
Sbjct: 127 tactccctccgtccctaaatataaga 102
>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataaga 38
|||||||||||| |||||||||||||
Sbjct: 136 tactccctccgtccctaaatataaga 111
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttcctaaatataaga 38
|||||||||||| |||||||||||||
Sbjct: 127 tactccctccgtccctaaatataaga 102
