miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00943;MIR824;AC189548.2/18653-19283 51351:Brassica rapa subsp.
pekinensis
Length = 631
Score = 73.8 bits (37), Expect = 2e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 11 ctcgagttgtctctcatgtctagaccatttgtgagaaggggtttt 55
|||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 1 ctcgagttgtctttcatgtctagaccatttgtgagaagggatttt 45
Score = 67.9 bits (34), Expect = 1e-10
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 384 cccttctcatcgatggtctagatttgcgaggtgactct 421
||||||||||||||||||||||| ||||||||||||||
Sbjct: 586 cccttctcatcgatggtctagatgtgcgaggtgactct 623
>RF00943;MIR824;FM164204.1/27-664 3702:Arabidopsis thaliana (thale
cress)
Length = 638
Score = 73.8 bits (37), Expect = 2e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 14 gagttgtctctcatgtctagaccatttgtgagaaggg 50
|||||||||||||||||||||||||||||||||||||
Sbjct: 4 gagttgtctctcatgtctagaccatttgtgagaaggg 40
Score = 67.9 bits (34), Expect = 1e-10
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 384 cccttctcatcgatggtctagatttgcgaggtgactct 421
||||||||||||||||||||||| ||||||||||||||
Sbjct: 593 cccttctcatcgatggtctagatgtgcgaggtgactct 630
>RF00943;MIR824;FM164206.1/41-590 3702:Arabidopsis thaliana (thale
cress)
Length = 550
Score = 73.8 bits (37), Expect = 2e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 14 gagttgtctctcatgtctagaccatttgtgagaaggg 50
|||||||||||||||||||||||||||||||||||||
Sbjct: 4 gagttgtctctcatgtctagaccatttgtgagaaggg 40
Score = 67.9 bits (34), Expect = 1e-10
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 384 cccttctcatcgatggtctagatttgcgaggtgactct 421
||||||||||||||||||||||| ||||||||||||||
Sbjct: 505 cccttctcatcgatggtctagatgtgcgaggtgactct 542
