miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00640;MIR167_1;EU548950.1/213-338 3702:Arabidopsis thaliana
(thale cress)
Length = 126
Score = 105 bits (53), Expect = 1e-22
Identities = 106/120 (88%), Gaps = 4/120 (3%)
Strand = Plus / Plus
Query: 3 ggcatctgatgaagctgccagcacgatctaattaactttctttctccgt--ttgt-tttc 59
||||||||||||||||||||||| |||||||||| |||||||| ||| | |||| ||||
Sbjct: 5 ggcatctgatgaagctgccagcatgatctaattagctttctttatcctttgttgtgtttc 64
Query: 60 atgacgatgg-aaagagatgagtgtagattagatcatgtttgcagtttcacctgttgact 118
|||||||||| ||||||| ||| | |||||||||||||| ||||||||||| |||||||
Sbjct: 65 atgacgatggttaagagatcagtctcgattagatcatgttcgcagtttcacccgttgact 124
>RF00640;MIR167_1;AC189327.2/282-159 51351:Brassica rapa subsp.
pekinensis
Length = 124
Score = 99.6 bits (50), Expect = 8e-21
Identities = 103/118 (87%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 3 ggcatctgatgaagctgccagcacgatctaattaactttctttctccgtt-tgttttcat 61
||||||||||||||||||||||| |||||| |||||||| |||||||||| | | | |||
Sbjct: 5 ggcatctgatgaagctgccagcatgatctagttaactttatttctccgttgtttatccat 64
Query: 62 gacgatgg-aaagagatgagtgtagattagatcatgtttgcagtttcacctgttgact 118
||| |||| |||| ||| ||||| |||||||||||||| | ||||||||| |||||||
Sbjct: 65 gacaatggaaaagggataagtgtcgattagatcatgttcgtagtttcacccgttgact 122
