miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00669;mir-96;ABEP02026797.1/7829-7902 7739:Branchiostoma
floridae (Florida lancelet)
Length = 74
Score = 147 bits (74), Expect = 3e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 13 ttgctctgtttggcactagcacatttttgctgggcaggtgtgtaggccaaaattgttagt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgctctgtttggcactagcacatttttgctgggcaggtgtgtaggccaaaattgttagt 60
Query: 73 gccaaatacagcct 86
||||||||||||||
Sbjct: 61 gccaaatacagcct 74
>RF00669;mir-96;ABRQ01279950.1/675-752 9813:Procavia capensis
(cape rock hyrax)
Length = 78
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tttggcactagcacatttttgct 43
|||||||||||||||||||||||
Sbjct: 9 tttggcactagcacatttttgct 31
>RF00669;mir-96;AL590150.2/106766-106689 7955:Danio rerio
(zebrafish)
Length = 78
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tttggcactagcacatttttgct 43
|||||||||||||||||||||||
Sbjct: 9 tttggcactagcacatttttgct 31
>RF00669;mir-96;CAAB01000329.1/61906-61829 31033:Takifugu rubripes
Length = 78
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tttggcactagcacatttttgct 43
|||||||||||||||||||||||
Sbjct: 9 tttggcactagcacatttttgct 31
>RF00669;mir-96;AANH01001637.1/239663-239741 69293:Gasterosteus
aculeatus (three-spined stickleback)
Length = 79
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tttggcactagcacatttttgct 43
|||||||||||||||||||||||
Sbjct: 9 tttggcactagcacatttttgct 31
>RF00669;mir-96;BAAF04047675.1/12047-12125 8090:Oryzias latipes
(Japanese medaka)
Length = 79
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tttggcactagcacatttttgct 43
|||||||||||||||||||||||
Sbjct: 9 tttggcactagcacatttttgct 31
>RF00669;mir-96;AAVX01227232.1/474-397 7868:Callorhinchus milii
(ghost shark)
Length = 78
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tttggcactagcacatttttgct 43
|||||||||||||||||||||||
Sbjct: 9 tttggcactagcacatttttgct 31
