miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;ABXC01006238.1/21919-22080 4558:Sorghum bicolor
(sorghum)
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 129/154 (83%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagatacattgttttta--- 71
|||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgttccacattataagacgttttggcttttctagatacattatttttacta 64
Query: 72 ------ttctagacattgtgtatatctaagtgcataacaaaagatacgtatctagaaaag 125
||||||||| | || |||||||||||||| |||||| | | ||||||||||
Sbjct: 65 ctatgcatctagacatagcgtgtatctaagtgcatagcaaaagccatgaatctagaaaac 124
Query: 126 ccaaatcgtcttataatttggaatagggggagta 159
||||| |||||||||||||||||| | |||||||
Sbjct: 125 ccaaaacgtcttataatttggaatggagggagta 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 14 atactccctccgttccaaattataagatgttttggcttttctagat 59
||||||||||| ||||||||||||||| ||||||| ||||||||||
Sbjct: 159 atactccctccattccaaattataagacgttttgggttttctagat 114
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 113 gtatctagaaaagccaaatcgtcttataatttggaatagggggagtactt 162
|||||||||||||||||| ||||||||||| ||||| | ||||||||||
Sbjct: 51 gtatctagaaaagccaaaacgtcttataatgtggaacggagggagtactt 2
>RF00906;MIR1122;ABXC01001510.1/32715-32871 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 111 bits (56), Expect = 3e-24
Identities = 120/139 (86%), Gaps = 8/139 (5%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagatacattgtttttatt- 73
|||||||||||||||||| ||||||| ||||||||||| ||||||||||| |||||| |
Sbjct: 153 tactccctccgttccaaactataagacgttttggcttt-ctagatacattttttttacta 95
Query: 74 -----ctagacattgtgtatatctaagtgcataacaaaagatacgtatctagaaaagcca 128
||||||| ||| ||||||||||||||| ||||||| ||||||| ||||||||||
Sbjct: 94 tgtatctagacacagtgcatatctaagtgcatagcaaaaga-acgtatcaagaaaagcca 36
Query: 129 aatcgtcttataatttgga 147
|| |||||||||||||||
Sbjct: 35 aaatgtcttataatttgga 17
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagatac 61
||||||||||| |||||||||||||| ||||||||||||| |||||
Sbjct: 5 tactccctccggtccaaattataagacattttggcttttcttgatac 51
>RF00906;MIR1122;ABXC01002870.1/113864-113706 4558:Sorghum bicolor
(sorghum)
Length = 159
Score = 103 bits (52), Expect = 8e-22
Identities = 126/151 (83%), Gaps = 6/151 (3%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagatacattgtttttat-- 72
||||||||||||| |||| ||||||| ||||| |||||||||||||||| | ||| |
Sbjct: 155 tactccctccgtttcaaactataagacgttttagcttttctagatacatcgctttcacaa 96
Query: 73 ----tctagacattgtgtatatctaagtgcataacaaaagatacgtatctagaaaagcca 128
||||||||| |||||||||||||||||||| |||| | | ||||||||||||||
Sbjct: 95 cgcatctagacatagtgtatatctaagtgcataaagaaagccatgaatctagaaaagcca 36
Query: 129 aatcgtcttataatttggaatagggggagta 159
|| |||||||||||||| || || |||||||
Sbjct: 35 aaacgtcttataatttgaaacagagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagat 59
||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctctgtttcaaattataagacgttttggcttttctagat 49
>RF00906;MIR1122;ABXC01002481.1/9459-9348 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagatacattgttttta 71
|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgttccaaattgtaagatgttttggcttttctagatacattgctttta 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 84 tgtatatctaagtgcataacaaaagatacgtatctagaaaagccaaatcgtcttataatt 143
|||| ||||||||||||| ||||| | |||||||||||||||||| | ||||| ||||
Sbjct: 80 tgtacatctaagtgcatagtaaaagcaatgtatctagaaaagccaaaacatcttacaatt 21
Query: 144 tggaa 148
|||||
Sbjct: 20 tggaa 16
>RF00906;MIR1122;ABXC01000872.1/103457-103600 4558:Sorghum bicolor
(sorghum)
Length = 144
Score = 97.6 bits (49), Expect = 5e-20
Identities = 119/142 (83%), Gaps = 9/142 (6%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagatacattgtttttattc 74
|||||||||| ||||||| ||||||| |||||||||||||| |||||||| |||||
Sbjct: 140 tactccctccattccaaactataagacattttggcttttctaaatacattgctttta--- 84
Query: 75 tagacattgtgtatatctaagtgcataacaaaagatacgtatctagaaaagccaaatcgt 134
|| ||| | || ||||||||| |||||| ||||||||||||||||||||| |||
Sbjct: 83 ----caatgtatctag--aagtgcataccaaaagctacgtatctagaaaagccaaaacgt 30
Query: 135 cttataatttggaataggggga 156
||||||||||||||| ||||||
Sbjct: 29 cttataatttggaatgggggga 8
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 26 ttccaaattataagatgttttggcttttctagatac 61
||||||||||||||| ||||||||||||||||||||
Sbjct: 16 ttccaaattataagacgttttggcttttctagatac 51
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 113 gtatctagaaaagccaaatcgtcttataatttggaatagggggagta 159
|||| ||||||||||||| |||||||| |||||||| | |||||||
Sbjct: 94 gtatttagaaaagccaaaatgtcttatagtttggaatggagggagta 140
>RF00906;MIR1122;ABXC01000088.1/175772-175619 4558:Sorghum bicolor
(sorghum)
Length = 154
Score = 93.7 bits (47), Expect = 8e-19
Identities = 120/143 (83%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 18 tccctccgttccaaattataagatgttttggcttttctagatacattgtttttattctag 77
||||||| ||||||||||||||| |||||||||||||||||||||| | ||| | | |
Sbjct: 8 tccctccattccaaattataagacgttttggcttttctagatacatggctttaactatgt 67
Query: 78 acattg-tgtatatctaagtgcataacaaaagatacgtatctagaaaagccaaatcgtct 136
| | | ||||||||||||||| || |||||| || |||||||| ||||||||| ||||
Sbjct: 68 atctagatgtatatctaagtgcgtagcaaaagctatgtatctagtaaagccaaaatgtct 127
Query: 137 tataatttggaatagggggagta 159
|||||||||| || | |||||||
Sbjct: 128 tataatttgggatggagggagta 150
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 113 gtatctagaaaagccaaatcgtcttataatttggaat 149
|||||||||||||||||| ||||||||||||||||||
Sbjct: 51 gtatctagaaaagccaaaacgtcttataatttggaat 15
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 14 atactccctccgttccaaattataagatgttttggcttttctagatacat 63
||||||||||| | ||||||||||||| |||||||||| ||||||||||
Sbjct: 151 atactccctccatcccaaattataagacattttggctttactagatacat 102
>RF00906;MIR1122;ABXC01002915.1/67233-67385 4558:Sorghum bicolor
(sorghum)
Length = 153
Score = 87.7 bits (44), Expect = 5e-17
Identities = 100/119 (84%), Gaps = 6/119 (5%)
Strand = Plus / Plus
Query: 12 aaatactccctccgttccaaattataagatgttttggcttttctagatacattgttttta 71
|||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||
Sbjct: 2 aaatactccctccgctccaaattataagacattttgacttttctagatacattgctttta 61
Query: 72 ------ttctagacattgtgtatatctaagtgcataacaaaagatacgtatctagaaaa 124
| ||||||| ||||||||||||||||||| ||||| || ||||||| ||||
Sbjct: 62 ctatgcatttagacatagtgtatatctaagtgcatagcaaaaactatgtatctaaaaaa 120
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 113 gtatctagaaaagccaaatcgtcttataatttgga 147
||||||||||||| |||| |||||||||||||||
Sbjct: 51 gtatctagaaaagtcaaaatgtcttataatttgga 17
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataaga 40
|||||||||| |||||||||||||||
Sbjct: 149 tactccctccattccaaattataaga 124
>RF00906;MIR1122;ABXC01006180.1/72632-72485 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagatacat 63
|||||||||||||||||||| |||| ||||||||| |||||||||||||
Sbjct: 5 tactccctccgttccaaattgtaaggtgttttggcatttctagatacat 53
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagatacattgttttta 71
|||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||
Sbjct: 144 tactccctccgttccaaattataagacattttggtttttctagatgcattgatttta 88
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 115 atctagaaaagccaaatcgtcttataatttggaa 148
|||||||||| ||||| ||||||||||||||||
Sbjct: 100 atctagaaaaaccaaaatgtcttataatttggaa 133
>RF00906;MIR1122;ABXC01000087.1/99966-100106 4558:Sorghum bicolor
(sorghum)
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 13 aatactccctccgttccaaattataagatgttttggcttttctagat 59
||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 3 aatactccctccgttccaaattataagtcgttctggcttttctagat 49
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 115 atctagaaaagccaaatcgtcttataatttggaa 148
|||||||||||||| | || ||||||||||||||
Sbjct: 49 atctagaaaagccagaacgacttataatttggaa 16
>RF00906;MIR1122;ABXC01000415.1/124553-124445 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagata 60
||||| |||||||||||||||||||| ||||||||||||| |||||
Sbjct: 5 tactctctccgttccaaattataagacgttttggcttttccagata 50
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataagatgttttggct 50
|||||||||||||||||||||||||| |||||||||
Sbjct: 105 tactccctccgttccaaattataagacgttttggct 70
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 114 tatctagaaaagccaaatcgtcttataatttggaa 148
||||| ||||||||||| |||||||||||||||||
Sbjct: 50 tatctggaaaagccaaaacgtcttataatttggaa 16
>RF00906;MIR1122;ABXC01001787.1/79252-79126 4558:Sorghum bicolor
(sorghum)
Length = 127
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 12 aaatactccctccgttccaaattataagatgttttggcttttctagatac 61
|||||||||||| |||||||||||||||| ||||||| ||||| ||||||
Sbjct: 2 aaatactccctctgttccaaattataagacgttttggtttttcaagatac 51
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 113 gtatctagaaaagccaaatcgtcttataatttggaatagggggagta 159
|||||| ||||| ||||| ||||||||||||||||| || |||||||
Sbjct: 51 gtatcttgaaaaaccaaaacgtcttataatttggaacagagggagta 5
>RF00906;MIR1122;ABXC01000869.1/217-331 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataagatgttttggcttt 52
|||||||||||||||||||||||||| |||||||||||
Sbjct: 111 tactccctccgttccaaattataagacgttttggcttt 74
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 122 aaagccaaatcgtcttataatttggaa 148
||||||||| |||||||||||||||||
Sbjct: 74 aaagccaaaacgtcttataatttggaa 100
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataaga 40
||||||||| ||||||||||||||||
Sbjct: 5 tactccctctgttccaaattataaga 30
>RF00906;MIR1122;ABXC01000098.1/126393-126501 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagatacatt 64
|||||||||| | ||||||||| ||| |||||||||||||||||||||||
Sbjct: 5 tactccctccatcccaaattatgagacgttttggcttttctagatacatt 54
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 113 gtatctagaaaagccaaatcgtcttataatttggaatagggggagtact 161
|||||||||||||||||| ||||| ||||||||| || | |||||||||
Sbjct: 51 gtatctagaaaagccaaaacgtctcataatttgggatggagggagtact 3
>RF00906;MIR1122;ABXC01006511.1/264469-264340 4558:Sorghum bicolor
(sorghum)
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagatacattgttt 68
|||| ||||||||| ||||||||||| ||||||||||||||||||||| ||||
Sbjct: 126 tacttcctccgttctaaattataagacattttggcttttctagatacatagttt 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 33 ttataagatgttttggcttttctagatacattgttttta 71
|||||||||| |||||||||||||||||||||| |||||
Sbjct: 30 ttataagatgctttggcttttctagatacattgctttta 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 113 gtatctagaaaagccaaatcgtcttataattt 144
|||||||||||||||||| ||||||||||||
Sbjct: 80 gtatctagaaaagccaaaatgtcttataattt 111
>RF00906;MIR1122;ABXC01000332.1/159241-159126 4558:Sorghum bicolor
(sorghum)
Length = 116
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagatacat 63
|||||||||| ||||||||||||||| ||||| |||||||||||||||
Sbjct: 112 tactccctccattccaaattataagacattttgtcttttctagatacat 64
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 18 tccctccgttccaaattataagatgttttggcttttctagata 60
||||||| ||||||| ||||||| ||||||||||||||||||
Sbjct: 8 tccctccattccaaaatataagacattttggcttttctagata 50
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 113 gtatctagaaaagccaaatcgtcttataatttggaatagggggagta 159
||||||||||||| |||| ||||||||||||||||| | |||||||
Sbjct: 66 gtatctagaaaagacaaaatgtcttataatttggaatggagggagta 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 114 tatctagaaaagccaaatcgtcttataatttggaat 149
||||||||||||||||| |||||||| ||||||||
Sbjct: 50 tatctagaaaagccaaaatgtcttatattttggaat 15
>RF00906;MIR1122;ABXC01001482.1/21413-21536 4558:Sorghum bicolor
(sorghum)
Length = 124
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 12 aaatactccctccgttccaaattataagatgttttggcttttcta 56
||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 2 aaatactccctccattccaaattgtaagacgttttggcttttcta 46
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagatacattgttttta 71
|||||| ||| |||||||||||||||||| |||||||||| |||| ||||| |||||
Sbjct: 120 tactccatccattccaaattataagatgtcttggcttttcaagatgcattgatttta 64
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 118 tagaaaagccaaatcgtcttataatttggaatagggggagta 159
||||||||||||| ||||||| |||||||||| | |||||||
Sbjct: 46 tagaaaagccaaaacgtcttacaatttggaatggagggagta 5
>RF00906;MIR1122;ABXC01001887.1/109652-109767 4558:Sorghum bicolor
(sorghum)
Length = 116
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctag 57
|||||||||| ||||||||| |||| |||||||||||||||||
Sbjct: 5 tactccctccattccaaattgtaagttgttttggcttttctag 47
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 14 atactccctccgttccaaattataagatgttttggcttttctagatacat 63
||||||||||| ||||||||| |||| ||||||||| ||||| |||||
Sbjct: 113 atactccctccattccaaattgtaagtcattttggcttctctaggtacat 64
>RF00906;MIR1122;ABXC01002968.1/30248-30403 4558:Sorghum bicolor
(sorghum)
Length = 156
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctagat 59
|||||||||||| ||||| ||||||| |||||||| |||||||||
Sbjct: 152 tactccctccgtcccaaactataagacgttttggcatttctagat 108
Score = 56.0 bits (28), Expect = 2e-07
Identities = 39/42 (92%), Gaps = 3/42 (7%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggcttttcta 56
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgttccaaattataa---gttttggcttttcta 43
>RF00906;MIR1122;ABXC01000255.1/62068-61965 4558:Sorghum bicolor
(sorghum)
Length = 104
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggct 50
|||||||||| ||||||||||||||| |||||||||
Sbjct: 5 tactccctccattccaaattataagacgttttggct 40
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 26 ttccaaattataagatgttttggcttttcta 56
||||||||||||||| |||||||||||||||
Sbjct: 80 ttccaaattataagacgttttggcttttcta 50
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 118 tagaaaagccaaatcgtcttataatttggaa 148
||||||||||||| |||||||||||||||||
Sbjct: 50 tagaaaagccaaaacgtcttataatttggaa 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 124 agccaaatcgtcttataatttggaatagggggagtac 160
||||||| |||||||||||||||||| | ||||||||
Sbjct: 40 agccaaaacgtcttataatttggaatggagggagtac 4
>RF00906;MIR1122;ABXC01003117.1/17769-17632 4558:Sorghum bicolor
(sorghum)
Length = 138
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 atactccctccgttccaaattataag 39
||||||||||||||||||||||||||
Sbjct: 4 atactccctccgttccaaattataag 29
>RF00906;MIR1122;ABXC01002751.1/4300-4149 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 atactccctccgttccaaattataag 39
||||||||||||||||||||||||||
Sbjct: 4 atactccctccgttccaaattataag 29
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataag 39
|||||||||||||||||||||||||
Sbjct: 148 tactccctccgttccaaattataag 124
>RF00906;MIR1122;AACV01025230.1/832-919 39947:Oryza sativa
Japonica Group
Length = 88
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataagatgttttggcttt 52
||||||||||||| || |||||||||||||||| ||||
Sbjct: 84 tactccctccgtttcagattataagatgttttgacttt 47
>RF00906;MIR1122;ABXC01006108.1/73971-74122 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggctt 51
|||||||||||||||||||| |||| ||||||||||
Sbjct: 5 tactccctccgttccaaattgtaagtcgttttggctt 41
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 18 tccctccgttccaaattataagatgttttggcttttctagatacat 63
||||||||||||||| | ||| |||||||||||| |||||||||
Sbjct: 145 tccctccgttccaaaatgcaagtcgttttggcttttttagatacat 100
>RF00906;MIR1122;ABXC01001527.1/885-965 4558:Sorghum bicolor
(sorghum)
Length = 81
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataag 39
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaattataag 29
>RF00906;MIR1122;ABXC01006544.1/387099-387256 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataag 39
|||||||||||||||||||||||||
Sbjct: 154 tactccctccgttccaaattataag 130
>RF00906;MIR1122;ABXC01000646.1/88636-88479 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataag 39
|||||||||||||||||||||||||
Sbjct: 154 tactccctccgttccaaattataag 130
>RF00906;MIR1122;ABXC01002366.1/89795-89952 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttg 47
||||||||| ||||||||||||||| |||||||
Sbjct: 5 tactccctctgttccaaattataagttgttttg 37
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataag 39
|||||||||||||||||||||||||
Sbjct: 154 tactccctccgttccaaattataag 130
>RF00906;MIR1122;ABXC01003678.1/89613-89769 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataag 39
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaattataag 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 18 tccctccgttccaaattataag 39
||||||||||||||||||||||
Sbjct: 150 tccctccgttccaaattataag 129
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 13 aatactccctccgttccaaattataag 39
|||||||||||||||||||| ||||||
Sbjct: 155 aatactccctccgttccaaaatataag 129
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 13 aatactccctccgttccaaattataag 39
|||||||||||||||||||| ||||||
Sbjct: 153 aatactccctccgttccaaaatataag 127
>RF00906;MIR1122;ABXC01003647.1/157196-157057 4558:Sorghum bicolor
(sorghum)
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggctttt 53
||||||||| ||||||||||||||| || |||| |||||
Sbjct: 5 tactccctctgttccaaattataagttgctttgactttt 43
>RF00906;MIR1122;ABXC01002946.1/15272-15115 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 13 aatactccctccgttccaaattataag 39
|||||||| ||||||||||||||||||
Sbjct: 3 aatactccttccgttccaaattataag 29
>RF00906;MIR1122;AY761662.1/398-280 4558:Sorghum bicolor (sorghum)
Length = 119
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 17 ctccctccgttccaaattataagatgttttggcttttctagatacat 63
|||||||| | |||||||||| | ||||||| ||||||||||||||
Sbjct: 113 ctccctccatcccaaattataggtcgttttggtttttctagatacat 67
>RF00906;MIR1122;ABXC01005719.1/52257-52354 4558:Sorghum bicolor
(sorghum)
Length = 98
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 15 tactccctccgttccaaattataagatgttttggcttttctag 57
||||||||||||||||| ||| ||| ||| ||||||||||||
Sbjct: 5 tactccctccgttccaacttacaagccgttatggcttttctag 47
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 14 atactccctccgttccaaattataaga 40
||||||||||||||||||| |||||||
Sbjct: 164 atactccctccgttccaaaatataaga 138
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 atactccctccgttccaaattataag 39
||||||||||||||||||| ||||||
Sbjct: 119 atactccctccgttccaaaatataag 94
>RF00906;MIR1122;ABXC01006912.1/173040-173190 4558:Sorghum bicolor
(sorghum)
Length = 151
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 atactccctccgttccaaattataag 39
|||| |||||||||||||||||||||
Sbjct: 148 ataccccctccgttccaaattataag 123
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataaga 40
|||||||||||||||||| |||||||
Sbjct: 166 tactccctccgttccaaaatataaga 141
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 taaatactccctccgttccaaa 32
||||||||||||||||||||||
Sbjct: 105 taaatactccctccgttccaaa 84
>RF00906;MIR1122;EU379326.1/1838-1972 269377:Poa palustris
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 atactccctccgttccaaatta 35
||||||||||||||||||||||
Sbjct: 4 atactccctccgttccaaatta 25
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 14 atactccctccgttccaaatta 35
||||||||||||||||||||||
Sbjct: 132 atactccctccgttccaaatta 111
>RF00906;MIR1122;AC124836.2/101751-101630 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 atactccctccgttccaaattataag 39
||||||||||||||||| ||||||||
Sbjct: 119 atactccctccgttccatattataag 94
>RF00906;MIR1122;AAAA02017235.1/6832-6953 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 atactccctccgttccaaattataag 39
||||||||||||||||| ||||||||
Sbjct: 4 atactccctccgttccatattataag 29
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 tactccctccgttccaaattataaga 40
||||||||||||| ||||||||||||
Sbjct: 132 tactccctccgtttcaaattataaga 107
>RF00906;MIR1122;AACV01008813.1/4556-4689 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 aaatactccctccgttccaaattata 37
||||||||||||||||||||| ||||
Sbjct: 2 aaatactccctccgttccaaaatata 27
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 atactccctccgttccaaattataag 39
||||||||||||||||||| ||||||
Sbjct: 92 atactccctccgttccaaaatataag 67
