miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;ABXC01000646.1/88636-88479 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 174 bits (88), Expect = 3e-43
Identities = 136/153 (88%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 12 ctactctctccgttccaaattataagccgctttgacnnnnnnnnggtacatccattttgc 71
|||||| ||||||||||||||||||| ||||||||| ||||||||||||| |
Sbjct: 155 ctactccctccgttccaaattataagtcgctttgactttttt--ggtacatccatttcac 98
Query: 72 tatgcacctagatataatattatgtctagatacatagcaaaatgaatgaaccaaaaaagt 131
|||||| |||||||||||| |||||||||||||||||||||||| || ||||||||||||
Sbjct: 97 tatgcatctagatataataatatgtctagatacatagcaaaatggataaaccaaaaaagt 38
Query: 132 caaagcgacttataatttggaacggagggagta 164
|||||||||||||||||||||||||| ||||||
Sbjct: 37 caaagcgacttataatttggaacggatggagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 94/104 (90%)
Strand = Plus / Plus
Query: 61 atccattttgctatgcacctagatataatattatgtctagatacatagcaaaatgaatga 120
||||||||||||||| | ||||| ||| |||||| ||||||| ||||| ||||| |||
Sbjct: 51 atccattttgctatgtatctagacatattattatatctagatgcatagtgaaatggatgt 110
Query: 121 accaaaaaagtcaaagcgacttataatttggaacggagggagta 164
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 accaaaaaagtcaaagcgacttataatttggaacggagggagta 154
>RF00906;MIR1122;ABXC01003678.1/89613-89769 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 170 bits (86), Expect = 4e-42
Identities = 132/147 (89%), Gaps = 3/147 (2%)
Strand = Plus / Minus
Query: 19 ctccgttccaaattataagccgctttgacnnnnnnnnggtacatccattttgctatgcac 78
||||||||||||||||||| ||||||||| | |||||||||||||||||||||
Sbjct: 147 ctccgttccaaattataagtcgctttgactttttt--gatacatccattttgctatgcac 90
Query: 79 ctagatataatattatgtctagatacatagcaaaatgaatgaaccaaaaaagtcaaagcg 138
||||||| |||| |||||||||||||||||||||||| ||||||||||||| ||||| ||
Sbjct: 89 ctagata-aataatatgtctagatacatagcaaaatgtatgaaccaaaaaactcaaaacg 31
Query: 139 acttataatttggaacggagggagtac 165
|||||||||||||||||||||||||||
Sbjct: 30 acttataatttggaacggagggagtac 4
Score = 99.6 bits (50), Expect = 1e-20
Identities = 87/98 (88%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 64 cattttgctatgcacctagatataatattatgtctagatacatagcaaaatgaatgaacc 123
|||||||||||| | ||||| ||| |||| | ||||| | |||||||||||| ||| | |
Sbjct: 54 cattttgctatgtatctagacatattatt-tatctaggtgcatagcaaaatggatgtatc 112
Query: 124 aaaaaagtcaaagcgacttataatttggaacggaggga 161
||||||||||||||||||||||||||||||||||||||
Sbjct: 113 aaaaaagtcaaagcgacttataatttggaacggaggga 150
>RF00906;MIR1122;ABXC01006544.1/387099-387256 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 143 bits (72), Expect = 9e-34
Identities = 103/112 (91%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 56 ggtacatccattttgctatgcacctagatataatattatgtctagatacatagcaaaatg 115
||||||| ||||||| ||||| |||||||||| || ||| |||||| ||||||||||||
Sbjct: 47 ggtacattcattttgttatgcgtctagatataacat-atggctagatgcatagcaaaatg 105
Query: 116 aatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagtacat 167
|||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 aatgtaccaaaaaagtcaaagcgacttataatttggaacggagggagtacat 157
Score = 89.7 bits (45), Expect = 1e-17
Identities = 125/150 (83%), Gaps = 4/150 (2%)
Strand = Plus / Minus
Query: 13 tactctctccgttccaaattataagccgctttgacnnnnnnnnggtacatccattttgct 72
||||| ||||||||||||||||||| ||||||||| ||||||| |||||||||
Sbjct: 154 tactccctccgttccaaattataagtcgctttgactttttt--ggtacattcattttgct 97
Query: 73 atgcacctagatataatattatgtctagatacatagcaaaatgaatgaaccaaaaaag-t 131
||||| |||| ||| | |||| |||||| |||| ||||||||||| ||||||||| |
Sbjct: 96 atgcatctagccata-tgttatatctagacgcataacaaaatgaatgtaccaaaaaaaat 38
Query: 132 caaagcgacttataatttggaacggaggga 161
|||||||| ||||||||||||| |||||||
Sbjct: 37 caaagcgatttataatttggaatggaggga 8
>RF00906;MIR1122;ABXC01002366.1/89795-89952 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 133 bits (67), Expect = 9e-31
Identities = 101/111 (90%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 56 ggtacatccattttgctatgcacctagatataatattatgtctagatacatagcaaaatg 115
||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| |||||
Sbjct: 112 ggtacattcattttgctatgcatctagata-aataatatgtctagatacatagccaaatg 54
Query: 116 aatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagtaca 166
|||||||||| |||||||| | |||||||||||||||| |||||||||||
Sbjct: 53 gatgaaccaaagaagtcaaaacaacttataatttggaacagagggagtaca 3
Score = 99.6 bits (50), Expect = 1e-20
Identities = 94/106 (88%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 60 catccattttgctatgcacctagatataatattatgtctagatacatagcaaaatgaatg 119
||||||||| |||||| | ||||| ||| |||| | ||||||| ||||||||||||||||
Sbjct: 50 catccatttggctatgtatctagacatattatt-tatctagatgcatagcaaaatgaatg 108
Query: 120 aaccaaaaaa-gtcaaagcgacttataatttggaacggagggagta 164
||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 109 taccaaaaaaagttaaagtgacttataatttggaacggagggagta 154
>RF00906;MIR1122;ABXC01004969.1/59800-59956 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 113 bits (57), Expect = 8e-25
Identities = 97/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 56 ggtacatccattttgctatgcacctagatataatattatgtctagatacatagcaaaatg 115
|||||||| ||||||||||| | ||| |||||| || |||||||||| |||||||||||
Sbjct: 46 ggtacatcaattttgctatgtatctacatataacat-atgtctagattcatagcaaaatc 104
Query: 116 aatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagta 164
||| |||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 105 tatgtaccaaaaaagtcaaagtgacttataatttggaactgagggagta 153
Score = 91.7 bits (46), Expect = 3e-18
Identities = 95/110 (86%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 56 ggtacatccattttgctatgcacctagatataatattatgtctagatacatagcaaaatg 115
||||||| ||||||||||| | ||||| ||| | |||| | |||||||||||||||||
Sbjct: 112 ggtacatagattttgctatgaatctagacata-tgttatatgtagatacatagcaaaatt 54
Query: 116 aatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagtac 165
||| |||||| ||||||||||||||||||||||||||| |||| |||||
Sbjct: 53 gatgtaccaaacaagtcaaagcgacttataatttggaactgaggaagtac 4
>RF00906;MIR1122;ABXC01003117.1/17769-17632 4558:Sorghum bicolor
(sorghum)
Length = 138
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 97 ctagatacatagcaaaatgaatgaaccaaaaaagtcaaagcgacttataatttggaacgg 156
|||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 72 ctagatgcatagcaaaatggatgtaccaaaaaagtcaaagcgacttataatttggaacgg 13
Query: 157 agggagta 164
||||||||
Sbjct: 12 agggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/59 (89%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 96 tctagatacatagcaaaatgaatgaaccaaaaaagtcaaagcgacttataatttggaac 154
||||| ||||||||||| | ||| ||||||||||||||||| ||||||||||||||||
Sbjct: 68 tctaggtacatagcaaatt--atgtaccaaaaaagtcaaagcaacttataatttggaac 124
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/70 (84%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 13 tactctctccgttccaaattataagccgctttgacnnnnnnnnggtacatccattttgct 72
||||| ||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgttccaaattataagtcgctttgac--ttttttggtacatccattttgct 62
Query: 73 atgcacctag 82
||||| ||||
Sbjct: 63 atgcatctag 72
>RF00906;MIR1122;ABXC01000115.1/34151-34263 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 111 bits (56), Expect = 3e-24
Identities = 81/88 (92%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 56 ggtacatccattttgctatgcacctagatataatattatgtctagatacatagcaaaatg 115
|||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||
Sbjct: 24 ggtacatccattttgctatgtacctagatataacat-atgtctagatacatagcaaaatc 82
Query: 116 aatgaaccaaaaaagtcaaagcgactta 143
||| ||||||||||||||||| |||||
Sbjct: 83 gatgtaccaaaaaagtcaaagcaactta 110
Score = 83.8 bits (42), Expect = 7e-16
Identities = 79/90 (87%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 56 ggtacatccattttgctatgcacctagatataatattatgtctagatacatagcaaaatg 115
|||||||| ||||||||||| | ||||| ||| | |||| ||||| ||||||||||||||
Sbjct: 90 ggtacatcgattttgctatgtatctagacata-tgttatatctaggtacatagcaaaatg 32
Query: 116 aatgaaccaaaaaagtcaaagcgacttata 145
||| ||||||||||||||||| |||||||
Sbjct: 31 gatgtaccaaaaaagtcaaagcaacttata 2
>RF00906;MIR1122;ABXC01000784.1/46511-46398 4558:Sorghum bicolor
(sorghum)
Length = 114
Score = 109 bits (55), Expect = 1e-23
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 56 ggtacatccattttgctatgcacctagatataatattatgtctagatacatagcaaaatg 115
|||||||||| ||||||||| | |||||||||| | ||||||||||||||||||||||
Sbjct: 91 ggtacatccactttgctatgtatctagatataacaacatgtctagatacatagcaaaatc 32
Query: 116 aatgaaccaaaaaagtcaaagcgacttataa 146
||| ||||||||||||||||||||||||||
Sbjct: 31 gatgtaccaaaaaagtcaaagcgacttataa 1
Score = 85.7 bits (43), Expect = 2e-16
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 56 ggtacatccattttgctatgcacctagatataatattatgtctagatacatagcaaaatg 115
|||||||| ||||||||||| | ||||| || | |||| ||||||||||||||||| ||
Sbjct: 24 ggtacatcgattttgctatgtatctagacatgttgttatatctagatacatagcaaagtg 83
Query: 116 aatgaaccaaaaaagtcaaagcgacttataa 146
||| |||||||||||||||||| |||||||
Sbjct: 84 gatgtaccaaaaaagtcaaagcggcttataa 114
>RF00906;MIR1122;ABXC01002751.1/4300-4149 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 109 bits (55), Expect = 1e-23
Identities = 129/155 (83%), Gaps = 8/155 (5%)
Strand = Plus / Plus
Query: 13 tactctctccgttccaaattataagccgctttgacnnnnnnnnggtacatccattttgct 72
||||| ||||||||||||||||||| ||||||||| |||||||||||||| |
Sbjct: 5 tactccctccgttccaaattataagtcgctttgactttttt--ggtacatccattttatt 62
Query: 73 atgcacctagatataatattatgtctagatacatagcaaaatgaatgaaccaaaaaagtc 132
||||| |||||||| | ||| || || |||||||||| ||||||||||||||||
Sbjct: 63 atgcatctagatatca------gtcaagctagatagcaaaatagatgaaccaaaaaagtc 116
Query: 133 aaagcgacttataatttggaacggagggagtacat 167
|||||| ||||||||||||||||||||||||||||
Sbjct: 117 aaagcggcttataatttggaacggagggagtacat 151
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 96 tctagatacatagcaaaatgaatgaaccaaaaaagtcaaagcgacttataatttggaacg 155
||||||| |||| |||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 73 tctagatgcataataaaatggatgtaccaaaaaagtcaaagcgacttataatttggaacg 14
Query: 156 gagggagta 164
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;ABXC01002486.1/98513-98357 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 105 bits (53), Expect = 2e-22
Identities = 99/113 (87%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 56 ggtacatccattttgctatgcacctagatataatattatgtctagatacatagcaaaatg 115
|||||||||||||| ||| || |||||||| || | |||||||||||||||||||| |
Sbjct: 112 ggtacatccattttattatacatctagatatgatgt-atgtctagatacatagcaaattc 54
Query: 116 aatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagtacatg 168
||| ||||||| |||||| |||||||||||||||||||| ||||||||||||
Sbjct: 53 tatgtaccaaaacagtcaatgcgacttataatttggaacgaagggagtacatg 1
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 110 aaaatgaatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagta 164
|||||| ||| |||||| |||||||||||||||||||||| ||| ||||||||||
Sbjct: 99 aaaatggatgtaccaaagaagtcaaagcgacttataatttagaatggagggagta 153
>RF00906;MIR1122;ABXC01002946.1/15272-15115 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 105 bits (53), Expect = 2e-22
Identities = 92/105 (87%)
Strand = Plus / Minus
Query: 60 catccattttgctatgcacctagatataatattatgtctagatacatagcaaaatgaatg 119
|||| |||||| |||| | ||||| ||| ||||||||||| || ||||||||||||| ||
Sbjct: 109 catctattttgttatgtatctagacatattattatgtctaaatgcatagcaaaatgagtg 50
Query: 120 aaccaaaaaagtcaaagcgacttataatttggaacggagggagta 164
|||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 49 taccaaaaaagtccaagtgacttataatttggaacggaaggagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 89/101 (88%)
Strand = Plus / Plus
Query: 64 cattttgctatgcacctagatataatattatgtctagatacatagcaaaatgaatgaacc 123
|||||||||||||| |||| |||||| |||||||||||||||| |||||| |||||
Sbjct: 54 cattttgctatgcatttagacataataatatgtctagatacataacaaaatagatgaata 113
Query: 124 aaaaaagtcaaagcgacttataatttggaacggagggagta 164
| ||||| |||||||||||||||||||||||||| ||||||
Sbjct: 114 acaaaagacaaagcgacttataatttggaacggaaggagta 154
>RF00906;MIR1122;ABXC01006912.1/173040-173190 4558:Sorghum bicolor
(sorghum)
Length = 151
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 96 tctagatacatagcaaaatgaatgaaccaaaaaagtcaaagcgacttataatttggaacg 155
||||||| |||||||||||| ||| || ||||||||||||||||||||||||||||||||
Sbjct: 73 tctagatgcatagcaaaatggatgtactaaaaaagtcaaagcgacttataatttggaacg 14
Query: 156 gagggagtac 165
||| ||||||
Sbjct: 13 gagagagtac 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 64/75 (85%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 13 tactctctccgttccaaattataagccgctttgacnnnnnnnnggtacatccattttgct 72
||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 5 tactctctccgttccaaattataagtcgctttgactttttta--gtacatccattttgct 62
Query: 73 atgcacctagatata 87
||||| |||||||||
Sbjct: 63 atgcatctagatata 77
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 131 tcaaagcgacttataatttggaacggaggg 160
||||||||||||||||||||||||||||||
Sbjct: 114 tcaaagcgacttataatttggaacggaggg 143
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 19 ctccgttccaaattataagccgctttga 46
||||||||||||||||||| ||||||||
Sbjct: 141 ctccgttccaaattataagtcgctttga 114
>RF00906;MIR1122;ABXC01003647.1/157196-157057 4558:Sorghum bicolor
(sorghum)
Length = 140
Score = 87.7 bits (44), Expect = 5e-17
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 79 ctagatataatattatgtctagatacatagcaaaatgaatgaaccaaaaaagtcaaagcg 138
|||||| || |||||| ||||||| ||||||||||| || | |||||||||||||||
Sbjct: 90 ctagatgtattattatatctagatgcatagcaaaataggtgtagcaaaaaagtcaaagca 31
Query: 139 acttataatttggaacggagggagtaca 166
|||||||||||||||| |||||||||||
Sbjct: 30 acttataatttggaacagagggagtaca 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 65 attttgctatgcacctagatataatattatgtctagata 103
||||||||||||| |||||||||||| || ||||||||
Sbjct: 55 attttgctatgcatctagatataataatacatctagata 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 138 gacttataatttggaacggagggagta 164
||||||||||||||||| |||||||||
Sbjct: 110 gacttataatttggaacagagggagta 136
>RF00906;MIR1122;ABXC01000992.1/406365-406501 4558:Sorghum bicolor
(sorghum)
Length = 137
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 91 ttatgtctagatacatagcaaaatgaatgaaccaaaaaagtcaaagcgacttataatttg 150
|||| |||||||| |||| ||||| ||| ||| |||||||||||||| |||||||||||
Sbjct: 60 ttatatctagatatatagtaaaattgatgtacccaaaaagtcaaagcgccttataatttg 119
Query: 151 gaacggagggagta 164
|||| |||||||||
Sbjct: 120 gaactgagggagta 133
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 125 aaaaagtcaaagcgacttataatttggaacggagggag 162
|||||||||||||||||| |||||||||||||||||||
Sbjct: 44 aaaaagtcaaagcgacttgtaatttggaacggagggag 7
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 12 ctactctctccgttccaaattataagccgctttgac 47
|||||| ||| ||||||||||||||| |||||||||
Sbjct: 134 ctactccctcagttccaaattataaggcgctttgac 99
>RF00906;MIR1122;ABXC01001279.1/17843-17947 4558:Sorghum bicolor
(sorghum)
Length = 105
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 123 caaaaaagtcaaagcgacttataatttggaacggagggagtac 165
|||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 46 caaaaaagtcaaagtgacttataatttgaaacggagggagtac 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 129 agtcaaagcgacttataatttggaacggagggagta 164
||||||||| ||||||||||||||| ||||||||||
Sbjct: 66 agtcaaagcaacttataatttggaatggagggagta 101
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 114 tgaatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagta 164
|||||||||| ||||||||||| ||||||| ||||||||||||||||||
Sbjct: 55 tgaatgaacctaaaaagtcaaatttacttatattttggaacggagggagta 5
>RF00906;MIR1122;ABXC01001510.1/32715-32871 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 94 tgtctagatacatagcaaaatgaatgaaccaaaaaagtcaaagcgacttataatttggaa 153
||||||||||||||| |||| |||| | | | |||| |||| || |||||| |||||||
Sbjct: 83 tgtctagatacatagtaaaaaaaatgtatctagaaagccaaaacgtcttatagtttggaa 142
Query: 154 cggagggagtaca 166
|||||||||||||
Sbjct: 143 cggagggagtaca 155
>RF00906;MIR1122;ABXC01000087.1/99966-100106 4558:Sorghum bicolor
(sorghum)
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 137 cgacttataatttggaacggagggagta 164
||||||||||||||||||||||||||||
Sbjct: 32 cgacttataatttggaacggagggagta 5
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 114 tgaatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagta 164
|||||||||| ||||||||||| |||||| ||||||||||||||||||
Sbjct: 68 tgaatgaacctaaaaagtcaaatttgcttatattttggaacggagggagta 118
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 114 tgaatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagta 164
|||||||||| ||||||||||| |||||| ||||||||||||||||||
Sbjct: 103 tgaatgaacctaaaaagtcaaatttgcttatattttggaacggagggagta 153
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 114 tgaatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagta 164
|||||||||| ||||||||||| |||||| ||||||||||||||||||
Sbjct: 101 tgaatgaacctaaaaagtcaaatttgcttatattttggaacggagggagta 151
>RF00906;MIR1122;ABXC01001527.1/885-965 4558:Sorghum bicolor
(sorghum)
Length = 81
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 138 gacttataatttggaacggagggagta 164
|||||||||||||||||||||||||||
Sbjct: 31 gacttataatttggaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 138 gacttataatttggaacggagggagtac 165
|||||||||||||| |||||||||||||
Sbjct: 51 gacttataatttgggacggagggagtac 78
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactctctccgttccaaattataag 37
|||||| |||||||||||||||||||
Sbjct: 4 ctactccctccgttccaaattataag 29
>RF00906;MIR1122;ABXC01000415.1/124553-124445 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 ctactctctccgttccaaattataag 37
||||||||||||||||||||||||||
Sbjct: 4 ctactctctccgttccaaattataag 29
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 140 cttataatttggaacggagggagta 164
|||||||||||||||||||||||||
Sbjct: 81 cttataatttggaacggagggagta 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 126 aaaagtcaaagcgacttataatttggaacggagggagta 164
||||| |||| || ||||||||||||||||||| |||||
Sbjct: 43 aaaagccaaaacgtcttataatttggaacggagagagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 ctactctctccgttccaaattataag 37
|||||| |||||||||||||||||||
Sbjct: 106 ctactccctccgttccaaattataag 81
>RF00906;MIR1122;ABXC01006180.1/72632-72485 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 140 cttataatttggaacggagggagtac 165
||||||||||||||||||||||||||
Sbjct: 120 cttataatttggaacggagggagtac 145
>RF00906;MIR1122;ABXC01002968.1/30248-30403 4558:Sorghum bicolor
(sorghum)
Length = 156
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 139 acttataatttggaacggagggagta 164
||||||||||||||||||||||||||
Sbjct: 30 acttataatttggaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactctctccgttccaaattataag 37
|||||| |||||||||||||||||||
Sbjct: 4 ctactccctccgttccaaattataag 29
>RF00906;MIR1122;ABXC01000869.1/217-331 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 127 aaagtcaaagcgacttataatttggaacggagggagta 164
|||| |||| || |||||||||||||||||||||||||
Sbjct: 74 aaagccaaaacgtcttataatttggaacggagggagta 111
>RF00906;MIR1122;ABXC01006108.1/73971-74122 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 132 caaagcgacttataatttggaacggagggagta 164
|||| ||||||| ||||||||||||||||||||
Sbjct: 37 caaaacgacttacaatttggaacggagggagta 5
>RF00906;MIR1122;ABXC01006238.1/21919-22080 4558:Sorghum bicolor
(sorghum)
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 126 aaaagtcaaagcgacttataatttggaacggagggagtac 165
||||| |||| || |||||||| |||||||||||||||||
Sbjct: 43 aaaagccaaaacgtcttataatgtggaacggagggagtac 4
>RF00906;MIR1122;ABXC01002915.1/67233-67385 4558:Sorghum bicolor
(sorghum)
Length = 153
Score = 48.1 bits (24), Expect = 4e-05
Identities = 83/100 (83%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 66 ttttgctatgcacctagatataatattatgtctagatacatagcaaaatgaatgaaccaa 125
||||||||||||| |||||||| | |||||||| || ||||| |||| |||| | | |
Sbjct: 103 ttttgctatgcacttagatatac-actatgtctaaatgcatagtaaaagcaatgtatcta 45
Query: 126 -aaaagtcaaagcgacttataatttggaacggagggagta 164
|||||||||| | ||||||||||||| |||||||||||
Sbjct: 44 gaaaagtcaaaatgtcttataatttggagcggagggagta 5
>RF00906;MIR1122;ABXC01004300.1/32074-32218 4558:Sorghum bicolor
(sorghum)
Length = 145
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 137 cgacttataatttggaacggagggagta 164
||||||| ||||||||||||||||||||
Sbjct: 32 cgacttacaatttggaacggagggagta 5
>RF00906;MIR1122;AC157502.2/65328-65172 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 110 aaaatgaatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagta 164
|||||||||||||| ||||||| || ||||||| |||| |||||||||||||
Sbjct: 59 aaaatgaatgaacctaaaaagtaaattttacttatattttgaaacggagggagta 5
>RF00906;MIR1122;ABXC01006511.1/264469-264340 4558:Sorghum bicolor
(sorghum)
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 139 acttataatttggaacggagggagtac 165
||||||||||||||| |||||||||||
Sbjct: 30 acttataatttggaatggagggagtac 4
>RF00906;MIR1122;ABRL01001248.1/28987-28884 65489:Oryza barthii
Length = 104
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 140 cttataatttggaacggagggagtaca 166
|||||||| ||||||||||||||||||
Sbjct: 29 cttataatatggaacggagggagtaca 3
>RF00906;MIR1122;AC147498.15/3925-4071 3880:Medicago truncatula
(barrel medic)
Length = 147
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 111 aaatgaatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagta 164
||||||||||||| ||||||| || ||||||| |||| |||||||||||||
Sbjct: 58 aaatgaatgaacctaaaaagtaaattttacttatattttgaaacggagggagta 5
>RF00906;MIR1122;CU137656.2/37315-37460 3880:Medicago truncatula
(barrel medic)
Length = 146
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 114 tgaatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagtacat 167
|||||||||| ||||||| ||| |||||| |||| ||||||||||||||||
Sbjct: 92 tgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagtacat 145
>RF00906;MIR1122;AC207600.4/94361-94205 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 114 tgaatgaaccaaaaaagtcaaagcgacttataatttggaacggagggagtacat 167
|||||||||| ||||||| ||| |||||| |||| ||||||||||||||||
Sbjct: 103 tgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagtacat 156
>RF00906;MIR1122;ABXC01000255.1/62068-61965 4558:Sorghum bicolor
(sorghum)
Length = 104
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 140 cttataatttggaacggagggagtac 165
|||||||||||||| |||||||||||
Sbjct: 29 cttataatttggaatggagggagtac 4
>RF00906;MIR1122;ABXC01004672.1/95113-95007 4558:Sorghum bicolor
(sorghum)
Length = 107
Score = 44.1 bits (22), Expect = 6e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 66 ttttgctatgcacctagatataatattatgtctagatacatagcaa 111
|||||||| ||||||||||||| | |||||||||||||||||||
Sbjct: 76 ttttgctaagcacctagatatacgct-atgtctagatacatagcaa 32
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 144 taatttggaacggagggagtac 165
||||||||||||||||||||||
Sbjct: 91 taatttggaacggagggagtac 112
>RF00906;MIR1122;EU626553.1/80133-80237 4572:Triticum urartu
Length = 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tttggaacggagggagtacatg 168
||||||||||||||||||||||
Sbjct: 84 tttggaacggagggagtacatg 105
>RF00906;MIR1122;AY465427.2/1983-1848 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 147 tttggaacggagggagtacatg 168
||||||||||||||||||||||
Sbjct: 22 tttggaacggagggagtacatg 1
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 138 gacttataatttggaacggagggagtacat 167
|||||||| || ||||||||||||||||||
Sbjct: 135 gacttatatttaggaacggagggagtacat 164
>RF00906;MIR1122;AC124836.2/101751-101630 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 139 acttataatttggaacggagggagta 164
||||||||| ||||||||||||||||
Sbjct: 93 acttataatatggaacggagggagta 118
>RF00906;MIR1122;AAAA02017235.1/6832-6953 39946:Oryza sativa Indica
Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 139 acttataatttggaacggagggagta 164
||||||||| ||||||||||||||||
Sbjct: 30 acttataatatggaacggagggagta 5
