miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00027;let-7;AACT01066545.1/5002-5073 51511:Ciona savignyi
          Length = 72

 Score =  143 bits (72), Expect = 5e-34
 Identities = 72/72 (100%)
 Strand = Plus / Plus

                                                                      
Query: 10 cacagatgaggtagttggttgtattgttttacaccttcggcgataactatacagccagct 69
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cacagatgaggtagttggttgtattgttttacaccttcggcgataactatacagccagct 60

                      
Query: 70 aactttactgtg 81
          ||||||||||||
Sbjct: 61 aactttactgtg 72




>RF00027;let-7;AABS01000095.1/49271-49200 7719:Ciona intestinalis
          Length = 72

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 16 tgaggtagttggttgtattgttt 38
          |||||||||||||||||||||||
Sbjct: 7  tgaggtagttggttgtattgttt 29