miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00661;mir-31;AACT01023302.1/10702-10781 51511:Ciona savignyi
Length = 80
Score = 159 bits (80), Expect = 7e-39
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 3 gtgactagcactatggcaagatgttggcatagctataaaaatgttaaacatagtgtgcta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgactagcactatggcaagatgttggcatagctataaaaatgttaaacatagtgtgcta 60
Query: 63 atgtctagccttggcgctag 82
||||||||||||||||||||
Sbjct: 61 atgtctagccttggcgctag 80
>RF00661;mir-31;AABS01000260.1/39485-39404 7719:Ciona intestinalis
Length = 82
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 ctatggcaagatgttggcatagctat 38
||||||||||||||||||||||||||
Sbjct: 11 ctatggcaagatgttggcatagctat 36
>RF00661;mir-31;CAAK05021429.1/259-339 7955:Danio rerio
(zebrafish)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 atggcaagatgttggcatagct 36
||||||||||||||||||||||
Sbjct: 13 atggcaagatgttggcatagct 34
>RF00661;mir-31;ABEP02037830.1/78220-78140 7739:Branchiostoma
floridae (Florida lancelet)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 atggcaagatgttggcatagct 36
||||||||||||||||||||||
Sbjct: 13 atggcaagatgttggcatagct 34
>RF00661;mir-31;ABKQ02012146.1/10104-10027 377270:Anopheles
gambiae S
Length = 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tggcaagatgttggcatagcta 37
||||||||||||||||||||||
Sbjct: 14 tggcaagatgttggcatagcta 35
