miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00241;mir-8;AAFR03037717.1/783-855 13616:Monodelphis domestica
          (gray short-tailed opossum)
          Length = 73

 Score = 50.1 bits (25), Expect = 4e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 45 ttctaacactgtctggtaaagatgc 69
          |||||||||||||||||||||||||
Sbjct: 41 ttctaacactgtctggtaaagatgc 65




>RF00241;mir-8;AAHX01032846.1/18098-18178 10116:Rattus norvegicus
          (Norway rat)
          Length = 81

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 47 ctaacactgtctggtaaagatg 68
          ||||||||||||||||||||||
Sbjct: 51 ctaacactgtctggtaaagatg 72




>RF00241;mir-8;ABRQ01038381.1/1702-1622 9813:Procavia capensis
          (cape rock hyrax)
          Length = 81

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 47 ctaacactgtctggtaaagatg 68
          ||||||||||||||||||||||
Sbjct: 51 ctaacactgtctggtaaagatg 72