miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00053;mir-7;CU468920.7/50067-49977 7955:Danio rerio (zebrafish)
Length = 91
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 18 tgtggaagacttgtgattgtgttgttgt 45
|||||||||||||||||| |||||||||
Sbjct: 14 tgtggaagacttgtgattttgttgttgt 41
>RF00053;mir-7;AALT01636026.1/624-710 42254:Sorex araneus
(European shrew)
Length = 87
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 ccatgtggaagacttgtgattgtgttgttgt 45
|||| |||||||||||||||| |||||||||
Sbjct: 10 ccatctggaagacttgtgattttgttgttgt 40
>RF00053;mir-7;AC026385.19/122238-122323 10090:Mus musculus (house
mouse)
Length = 86
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 atgtggaagacttgtgattgtgttgtt 43
||||||||||||||||||| |||||||
Sbjct: 12 atgtggaagacttgtgattttgttgtt 38
