miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00653;mir-22;BAAF04020956.1/20-107 8090:Oryzias latipes
          (Japanese medaka)
          Length = 88

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 57 gtaaagctgccagttgaagagct 79
          |||||||||||||||||||||||
Sbjct: 53 gtaaagctgccagttgaagagct 75




>RF00653;mir-22;CT030218.5/50207-50290 7955:Danio rerio
          (zebrafish)
          Length = 84

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 58 taaagctgccagttgaagagct 79
          ||||||||||||||||||||||
Sbjct: 50 taaagctgccagttgaagagct 71




>RF00653;mir-22;CAAE01014999.1/1459406-1459318 99883:Tetraodon
          nigroviridis
          Length = 89

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 58 taaagctgccagttgaagagct 79
          ||||||||||||||||||||||
Sbjct: 55 taaagctgccagttgaagagct 76