miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00694;mir-137;AAWZ01010620.1/48359-48459 28377:Anolis
carolinensis (green anole)
Length = 101
Score = 93.7 bits (47), Expect = 4e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 17 acgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgtag 75
||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 22 acgggtattcttgggtatataatacagatggcgttgttattgcttgagaatacgcgtag 80
>RF00694;mir-137;AADN02012896.1/32588-32489 9031:Gallus gallus
(chicken)
Length = 100
Score = 77.8 bits (39), Expect = 2e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 17 acgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgtag 75
|||||||||||||||| ||||||| |||| |||||||||||||||||||||| |||||
Sbjct: 22 acgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcgtag 80
>RF00694;mir-137;AAPN01296459.1/4449-4348 9258:Ornithorhynchus
anatinus (platypus)
Length = 102
Score = 69.9 bits (35), Expect = 5e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 17 acgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgtag 75
||||||||||||||||| ||||||| ||| ||| ||||||||||| ||||||| |||||
Sbjct: 22 acgggtattcttgggtacataatacggatggcgctgttattgcttgagaatacgcgtag 80
>RF00694;mir-137;AAFR03049204.1/9121-9021 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 101
Score = 69.9 bits (35), Expect = 5e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 17 acgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgtag 75
||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||||||
Sbjct: 22 acgggtattcttgggtagataataccaatggcgctgttattgcttgagaatacacgtag 80
>RF00694;mir-137;BAAE01237923.1/971-872 8090:Oryzias latipes
(Japanese medaka)
Length = 100
Score = 69.9 bits (35), Expect = 5e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 17 acgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgtag 75
|||||||||||||||| ||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 22 acgggtattcttgggtggataatacggatcacgttgttattgcttaagaatacgcgtag 80
>RF00694;mir-137;BAAF04063265.1/5995-5897 8090:Oryzias latipes
(Japanese medaka)
Length = 99
Score = 67.9 bits (34), Expect = 2e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 15 ccacgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgta 74
|||||||||||||||||| ||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 20 ccacgggtattcttgggttgataatacagatgtcgatgttattgcttgagaatacgcgta 79
Query: 75 gc 76
||
Sbjct: 80 gc 81
>RF00694;mir-137;ABRO01064648.1/7203-7302 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 100
Score = 65.9 bits (33), Expect = 8e-11
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 17 acgggtattcttgggtatataatacagattgcgttgttattgcttaagaatac 69
|||||||||||||||| ||||||| |||| ||||||||| ||||||||||||
Sbjct: 22 acgggtattcttgggtggataatacggattacgttgttatagcttaagaatac 74
>RF00694;mir-137;AL929343.7/129004-128905 7955:Danio rerio
(zebrafish)
Length = 100
Score = 61.9 bits (31), Expect = 1e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 17 acgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgtag 75
|||||||||||||||| ||||||| | | |||||||||||||||||||||| |||||
Sbjct: 22 acgggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcgtag 80
>RF00694;mir-137;CAAK05033301.1/18518-18419 7955:Danio rerio
(zebrafish)
Length = 100
Score = 61.9 bits (31), Expect = 1e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 17 acgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgtag 75
|||||||||||||||| ||||||| | | |||||||||||||||||||||| |||||
Sbjct: 22 acgggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcgtag 80
>RF00694;mir-137;CAAE01013623.1/560-657 99883:Tetraodon
nigroviridis
Length = 98
Score = 58.0 bits (29), Expect = 2e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 15 ccacgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgta 74
|||||||||||||||||| ||||||||||| | ||||||||||| ||||||| ||||
Sbjct: 20 ccacgggtattcttgggttgataatacagatgtggatgttattgcttgagaatacgcgta 79
Query: 75 g 75
|
Sbjct: 80 g 80
>RF00694;mir-137;ABPK01025702.1/584-484 57307:Labeotropheus
fuelleborni
Length = 101
Score = 58.0 bits (29), Expect = 2e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 15 ccacgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgta 74
|||||||||||||||||| ||||||||||| | ||||||||||| ||||||| ||||
Sbjct: 21 ccacgggtattcttgggttgataatacagatgtggatgttattgcttgagaatacgcgta 80
Query: 75 g 75
|
Sbjct: 81 g 81
>RF00694;mir-137;BAAF04031315.1/5933-5836 8090:Oryzias latipes
(Japanese medaka)
Length = 98
Score = 58.0 bits (29), Expect = 2e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 15 ccacgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgta 74
|||||||||||||||||| ||||||||||| | ||||||||||| ||||||| ||||
Sbjct: 20 ccacgggtattcttgggttgataatacagatatggatgttattgcttgagaatacgcgta 79
Query: 75 g 75
|
Sbjct: 80 g 80
>RF00694;mir-137;AADG05005118.1/28931-28831 7460:Apis mellifera
(honey bee)
Length = 101
Score = 46.1 bits (23), Expect = 7e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 45 ttgcgttgttattgcttaagaatacacgtag 75
||||| ||||||||||| |||||||||||||
Sbjct: 51 ttgcgctgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AAGE02029705.1/92443-92543 7159:Aedes aegypti
(yellow fever mosquito)
Length = 101
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 49 gttgttattgcttaagaatacacgtag 75
||||||||||||| |||||||||||||
Sbjct: 56 gttgttattgcttgagaatacacgtag 82
>RF00694;mir-137;ABKQ02013341.1/3039-2937 377270:Anopheles gambiae
S
Length = 103
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 49 gttgttattgcttaagaatacacgtag 75
||||||||||||| |||||||||||||
Sbjct: 56 gttgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AAZO01004444.1/55394-55292 121224:Pediculus
humanus corporis (human body louse)
Length = 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgttattgcttaagaatacacgtagc 76
||||||||||| ||||||||||||||
Sbjct: 59 tgttattgcttgagaatacacgtagc 84
>RF00694;mir-137;BAAB01088495.1/2035-1935 7091:Bombyx mori
(domestic silkworm)
Length = 101
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgttattgcttaagaatacacgtagc 76
||||||||||| ||||||||||||||
Sbjct: 57 tgttattgcttgagaatacacgtagc 82
>RF00694;mir-137;AAJJ01002111.1/15264-15166 7070:Tribolium
castaneum (red flour beetle)
Length = 99
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgttattgcttaagaatacacgtagc 76
||||||||||| ||||||||||||||
Sbjct: 57 tgttattgcttgagaatacacgtagc 82
