miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00700;mir-375;BAAF04058576.1/818-750 8090:Oryzias latipes
(Japanese medaka)
Length = 69
Score = 56.0 bits (28), Expect = 8e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 59 tttgttcgttcggctcgcgttacgcagg 86
||||||||||||||||||||||||||||
Sbjct: 41 tttgttcgttcggctcgcgttacgcagg 68
>RF00700;mir-375;CU468956.14/114092-114163 7955:Danio rerio
(zebrafish)
Length = 72
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 tttgttcgttcggctcgcgttacgcag 85
|||||||||||||||||||||||||||
Sbjct: 44 tttgttcgttcggctcgcgttacgcag 70
>RF00700;mir-375;AADN02016765.1/7226-7294 9031:Gallus gallus
(chicken)
Length = 69
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 59 tttgttcgttcggctcgcgttacgcagg 86
|||||||||||||||||||||| |||||
Sbjct: 41 tttgttcgttcggctcgcgttaggcagg 68
>RF00700;mir-375;CU929360.7/11656-11724 7955:Danio rerio
(zebrafish)
Length = 69
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tttgttcgttcggctcgcgtta 80
||||||||||||||||||||||
Sbjct: 41 tttgttcgttcggctcgcgtta 62
>RF00700;mir-375;ABEP02038283.1/5668-5595 7739:Branchiostoma
floridae (Florida lancelet)
Length = 74
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tttgttcgttcggctcgcgtta 80
||||||||||||||||||||||
Sbjct: 46 tttgttcgttcggctcgcgtta 67
