miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00892;mir-551;AAFR03046841.1/43899-43813 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 87
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 aggcgacccatacttggtttca 68
||||||||||||||||||||||
Sbjct: 53 aggcgacccatacttggtttca 74
>RF00892;mir-551;AANN01687869.1/1924-1838 9365:Erinaceus europaeus
(western European hedgehog)
Length = 87
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 aggcgacccatacttggtttca 68
||||||||||||||||||||||
Sbjct: 53 aggcgacccatacttggtttca 74
>RF00892;mir-551;AAKN02050963.1/24909-24994 10141:Cavia porcellus
(domestic guinea pig)
Length = 86
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 aggcgacccatacttggtttca 68
||||||||||||||||||||||
Sbjct: 52 aggcgacccatacttggtttca 73
>RF00892;mir-551;ABRQ01321591.1/2376-2461 9813:Procavia capensis
(cape rock hyrax)
Length = 86
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 aggcgacccatacttggtttca 68
||||||||||||||||||||||
Sbjct: 52 aggcgacccatacttggtttca 73
>RF00892;mir-551;AAWZ01032406.1/96128-96215 28377:Anolis
carolinensis (green anole)
Length = 88
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 aggcgacccatacttggtttca 68
||||||||||||||||||||||
Sbjct: 54 aggcgacccatacttggtttca 75
>RF00892;mir-551;ABQF01023095.1/42853-42939 59729:Taeniopygia
guttata
Length = 87
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 aggcgacccatacttggtttca 68
||||||||||||||||||||||
Sbjct: 53 aggcgacccatacttggtttca 74
>RF00892;mir-551;AADN02021036.1/52994-52908 9031:Gallus gallus
(chicken)
Length = 87
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 aggcgacccatacttggtttca 68
||||||||||||||||||||||
Sbjct: 53 aggcgacccatacttggtttca 74
>RF00892;mir-551;AAFR03065316.1/1308-1223 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 86
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 45 ctaggcgacccatacttggtttcaa 69
||||||||||||| |||||||||||
Sbjct: 50 ctaggcgacccattcttggtttcaa 74
>RF00892;mir-551;AAGV020839576.1/977-1062 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 86
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 45 ctaggcgacccatacttggtttcaa 69
||||||||||||| |||||||||||
Sbjct: 50 ctaggcgacccattcttggtttcaa 74
>RF00892;mir-551;AAVX01059360.1/184-266 7868:Callorhinchus milii
(ghost shark)
Length = 83
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aggcgacccatacttggtttc 67
|||||||||||||||||||||
Sbjct: 52 aggcgacccatacttggtttc 72
