miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00455;mir-15;AADN02005381.1/19629-19713 9031:Gallus gallus
(chicken)
Length = 85
Score = 165 bits (83), Expect = 1e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 ccttggcataacgtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccttggcataacgtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatat 61
Query: 61 tgtgctgcctcaaaaatacaagg 83
|||||||||||||||||||||||
Sbjct: 62 tgtgctgcctcaaaaatacaagg 84
>RF00455;mir-15;ABRP01194837.1/2584-2662 132908:Pteropus vampyrus
(large flying fox)
Length = 79
Score = 73.8 bits (37), Expect = 3e-13
Identities = 64/71 (90%), Gaps = 4/71 (5%)
Strand = Plus / Plus
Query: 13 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 72
|||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||
Sbjct: 12 gtagcagcacataatg--ttgtggatttg--aaaggtgcaggccatattgtgctgcctca 67
Query: 73 aaaatacaagg 83
||||| |||||
Sbjct: 68 aaaatgcaagg 78
>RF00455;mir-15;AAVX01075355.1/1195-1112 7868:Callorhinchus milii
(ghost shark)
Length = 84
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gtagcagcacataatggtttgtg 35
|||||||||||||||||||||||
Sbjct: 14 gtagcagcacataatggtttgtg 36
