miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00691;mir-146;AADN02043396.1/1249-1345 9031:Gallus gallus
(chicken)
Length = 97
Score = 192 bits (97), Expect = 8e-49
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 17 ttggcagttcccagctctgagaactgaattccatggactggtttcaattccatgcgttca 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggcagttcccagctctgagaactgaattccatggactggtttcaattccatgcgttca 60
Query: 77 gtccatggtattcagttctctagcttggctgcatcaa 113
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtccatggtattcagttctctagcttggctgcatcaa 97
>RF00691;mir-146;CAAA01220328.1/4488-4574 10090:Mus musculus
(house mouse)
Length = 87
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 26 cccagctctgagaactgaattccatgg 52
|||||||||||||||||||||||||||
Sbjct: 8 cccagctctgagaactgaattccatgg 34
>RF00691;mir-146;AAVX01275541.1/618-713 7868:Callorhinchus milii
(ghost shark)
Length = 96
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 27 ccagctctgagaactgaattccatggactggt 58
|||||| ||||||||||||||||||| |||||
Sbjct: 9 ccagctgtgagaactgaattccatgggctggt 40
>RF00691;mir-146;AAWZ01011696.1/200150-200239 28377:Anolis
carolinensis (green anole)
Length = 90
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 agctctgagaactgaattccat 50
||||||||||||||||||||||
Sbjct: 11 agctctgagaactgaattccat 32
