miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;ABXC01000415.1/124553-124445 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 56.0 bits (28), Expect = 7e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 7 ttactactccctccgttccaaaatataagatgtttt 42
|||||||||||||||||||||| ||||||| |||||
Sbjct: 109 ttactactccctccgttccaaattataagacgtttt 74
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 7 ttactactccctccgttccaaaatataagatgttttagcttt 48
||||||||| |||||||||||| ||||||| ||||| |||||
Sbjct: 1 ttactactctctccgttccaaattataagacgttttggcttt 42
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 9 actactccctccgttccaaaatataag 35
|||||||||||||||||||||||||||
Sbjct: 3 actactccctccgttccaaaatataag 29
>RF00906;MIR1122;ABXC01002481.1/9459-9348 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaatataagatgttttagcttt 48
||||||||||||||||||| | ||||||||||| |||||
Sbjct: 4 ctactccctccgttccaaattgtaagatgttttggcttt 42
>RF00906;MIR1122;ABXC01001510.1/32715-32871 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataagatgttttagcttt 48
|||||||||||||||||| ||||||| ||||| |||||
Sbjct: 153 tactccctccgttccaaactataagacgttttggcttt 116
>RF00906;MIR1122;ABXC01000869.1/217-331 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataagatgttttagcttt 48
|||||||||||||||||| ||||||| ||||| |||||
Sbjct: 111 tactccctccgttccaaattataagacgttttggcttt 74
>RF00906;MIR1122;ABXC01002870.1/113864-113706 4558:Sorghum bicolor
(sorghum)
Length = 159
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataagatgttttagcttt 48
||||||||||||| |||| ||||||| |||||||||||
Sbjct: 155 tactccctccgtttcaaactataagacgttttagcttt 118
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
||||||||||||||||||||||||||
Sbjct: 163 tactccctccgttccaaaatataaga 138
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaatataaga 36
||||||||||||||| ||||||||||
Sbjct: 1 tactccctccgttcctaaatataaga 26
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
||||||||||||||||||||||||||
Sbjct: 166 tactccctccgttccaaaatataaga 141
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 actactccctccgttccaaaatataaga 36
||||||||||||||||| ||||||||||
Sbjct: 2 actactccctccgttcctaaatataaga 29
>RF00906;MIR1122;AAAA02003905.1/26512-26644 39946:Oryza sativa
Indica Group
Length = 133
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 8 tactactccctccgttccaaaatata 33
||||||||||||||||||||||||||
Sbjct: 2 tactactccctccgttccaaaatata 27
>RF00906;MIR1122;AAAA02009296.1/3612-3735 39946:Oryza sativa Indica
Group
Length = 124
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 7 ttactactccctccgttccaaaatataaga 36
|||||||||||||||| |||||||||||||
Sbjct: 124 ttactactccctccgtcccaaaatataaga 95
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataag 35
|||||||||||||||||||||||||
Sbjct: 118 tactccctccgttccaaaatataag 94
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataag 35
|||||||||||||||||||||||||
Sbjct: 153 tactccctccgttccaaaatataag 129
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataag 35
|||||||||||||||||||||||||
Sbjct: 151 tactccctccgttccaaaatataag 127
>RF00906;MIR1122;AY196347.1/5474-5564 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 91
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataagatgtttt 42
||||||||||||| ||| |||||||||||||||
Sbjct: 88 ctactccctccgtcccacaatataagatgtttt 56
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 tactactccctccgttccaaaatataaga 36
|||||||||||||||||| ||||||||||
Sbjct: 166 tactactccctccgttcctaaatataaga 138
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaatataaga 36
|||||||||||||||| ||||||||||
Sbjct: 1 ctactccctccgttcctaaatataaga 27
>RF00906;MIR1122;AAAA02030656.1/4636-4541 39946:Oryza sativa
Indica Group
Length = 96
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataa 34
|||||||||||||||||||||||||
Sbjct: 93 ctactccctccgttccaaaatataa 69
>RF00906;MIR1122;AAAA02003301.1/35949-35819 39946:Oryza sativa
Indica Group
Length = 131
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 tactactccctccgttccaaaatataaga 36
||||||||||||||| |||||||||||||
Sbjct: 130 tactactccctccgtcccaaaatataaga 102
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||||| |||||||||||
Sbjct: 5 tactccctccgttctaaaatataaga 30
>RF00906;MIR1122;AP002744.2/5581-5711 39947:Oryza sativa Japonica
Group
Length = 131
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 tactactccctccgttccaaaatataaga 36
||||||||||||||| |||||||||||||
Sbjct: 130 tactactccctccgtcccaaaatataaga 102
>RF00906;MIR1122;AAAA02004166.1/9974-9858 39946:Oryza sativa
Indica Group
Length = 117
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 tactactccctccgttccaaaatataaga 36
||||||||||||||| |||||||||||||
Sbjct: 2 tactactccctccgtcccaaaatataaga 30
>RF00906;MIR1122;AC079888.10/111519-111651 39947:Oryza sativa
Japonica Group
Length = 133
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataa 34
|||||||||||||||||||||||||
Sbjct: 130 ctactccctccgttccaaaatataa 106
>RF00906;MIR1122;AC138197.3/31250-31161 39947:Oryza sativa
Japonica Group
Length = 90
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 ttactactccctccgttccaaaatataag 35
|||||||||||||||| ||||||||||||
Sbjct: 90 ttactactccctccgtcccaaaatataag 62
>RF00906;MIR1122;AAAA02015448.1/20736-20847 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataa 34
|||||||||||||||||||||||||
Sbjct: 109 ctactccctccgttccaaaatataa 85
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataag 35
|||||||||||||||||||||||||
Sbjct: 91 tactccctccgttccaaaatataag 67
>RF00906;MIR1122;AAAA02005722.1/24068-24224 39946:Oryza sativa
Indica Group
Length = 157
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 tactactccctccgttccaaaatataaga 36
||||||||||||||| |||||||||||||
Sbjct: 156 tactactccctccgtcccaaaatataaga 128
>RF00906;MIR1122;AF325196.1/34233-34141 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 9 actactccctccgttccaaaatataaga 36
|||||||||||||| |||||||||||||
Sbjct: 91 actactccctccgtcccaaaatataaga 64
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 tactactccctccgttccaaaatataag 35
|||||||||||||||||| |||||||||
Sbjct: 2 tactactccctccgttcctaaatataag 29
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 tactactccctccgttccaaaata 31
||||||||||||||||||||||||
Sbjct: 93 tactactccctccgttccaaaata 70
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 actactccctccgttccaaaatataaga 36
||||||||||||||||| ||||||||||
Sbjct: 3 actactccctccgttcctaaatataaga 30
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
||||||||||||||| ||||||||||
Sbjct: 166 tactccctccgttcctaaatataaga 141
>RF00906;MIR1122;AAAA02017212.1/23354-23464 39946:Oryza sativa
Indica Group
Length = 111
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 8 tactactccctccgttccaaaatataag 35
||||||||||||||| ||||||||||||
Sbjct: 110 tactactccctccgtaccaaaatataag 83
>RF00906;MIR1122;AAAA02020856.1/51643-51799 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatata 33
||||||||||||||||||||||||
Sbjct: 154 ctactccctccgttccaaaatata 131
>RF00906;MIR1122;AACV01003599.1/47670-47777 39947:Oryza sativa
Japonica Group
Length = 108
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 9 actactccctccgttccaaaatataaga 36
||||||||||||||||||| ||||||||
Sbjct: 106 actactccctccgttccaatatataaga 79
>RF00906;MIR1122;AAAA02005495.1/1425-1318 39946:Oryza sativa Indica
Group
Length = 108
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 9 actactccctccgttccaaaatataaga 36
||||||||||||||||||| ||||||||
Sbjct: 106 actactccctccgttccaatatataaga 79
>RF00906;MIR1122;AAAA02034673.1/6609-6720 39946:Oryza sativa Indica
Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataagatgttttagct 46
|||||||||||| |||||||||||| | ||||||||
Sbjct: 108 tactccctccgtcccaaaatataagcttttttagct 73
>RF00906;MIR1122;AK242602.1/3859-3737 39947:Oryza sativa Japonica
Group
Length = 123
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 9 actactccctccgttccaaaatataaga 36
|||||||||||||| |||||||||||||
Sbjct: 121 actactccctccgtcccaaaatataaga 94
>RF00906;MIR1122;AL731597.3/103356-103467 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 8 tactactccctccgttccaaaatataag 35
||||||||||||||| ||||||||||||
Sbjct: 111 tactactccctccgtcccaaaatataag 84
>RF00906;MIR1122;AP008217.1/23244951-23245072 39947:Oryza sativa
Japonica Group
Length = 122
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatata 33
||||||||||||||||||||||||
Sbjct: 119 ctactccctccgttccaaaatata 96
>RF00906;MIR1122;AC147498.15/3925-4071 3880:Medicago truncatula
(barrel medic)
Length = 147
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 actactccctccgttccaaaatataag 35
||||||||||||||| |||||||||||
Sbjct: 3 actactccctccgtttcaaaatataag 29
>RF00906;MIR1122;AK248893.1/1282-1190 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaatataaga 36
||||||||||||||||| |||||||||
Sbjct: 4 ctactccctccgttccataatataaga 30
>RF00906;MIR1122;AAAA02034559.1/3133-3272 39946:Oryza sativa
Indica Group
Length = 140
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaatata 33
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaaatata 27
>RF00906;MIR1122;AAAA02003593.1/26423-26497 39946:Oryza sativa
Indica Group
Length = 75
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataagat 37
|||||||||||| ||||||||||||||
Sbjct: 71 tactccctccgtcccaaaatataagat 45
>RF00906;MIR1122;AACV01018415.1/900-764 39947:Oryza sativa
Japonica Group
Length = 137
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 8 tactactccctccgttccaaaatataagatgtttt 42
|||||||||||| || || ||||||||||||||||
Sbjct: 2 tactactccctctgtccctaaatataagatgtttt 36
>RF00906;MIR1122;AAAA02016488.1/7317-7428 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 actactccctccgttccaaaatataag 35
|||||||||||||| ||||||||||||
Sbjct: 110 actactccctccgtcccaaaatataag 84
>RF00906;MIR1122;AP002972.3/107404-107293 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 7e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaatataagatgttttagctttg 49
|||||||||||| |||||||||||| |||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagcatttttagctttg 43
>RF00906;MIR1122;AAAA02013497.1/8427-8281 39946:Oryza sativa
Indica Group
Length = 147
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 actactccctccgttccaaaatataag 35
|||||||||||||| ||||||||||||
Sbjct: 3 actactccctccgtcccaaaatataag 29
>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataaga 36
||||||||||||| |||||||||||||
Sbjct: 132 ctactccctccgtcccaaaatataaga 106
>RF00906;MIR1122;AAAA02007333.1/13137-13002 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataaga 36
||||||||||||||||| |||||||||
Sbjct: 133 ctactccctccgttccataatataaga 107
>RF00906;MIR1122;AACV01008275.1/11041-11180 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaatata 33
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaaatata 27
>RF00906;MIR1122;AACV01008227.1/1-122 39947:Oryza sativa Japonica
Group
Length = 122
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaatata 33
|||||||||||||||||||||||
Sbjct: 3 tactccctccgttccaaaatata 25
>RF00906;MIR1122;AC130724.2/11285-11174 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 actactccctccgttccaaaatataag 35
|||||||||||||| ||||||||||||
Sbjct: 3 actactccctccgtcccaaaatataag 29
Score = 46.1 bits (23), Expect = 7e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 7 ttactactccctccgttccaaaatataagatgttttagctttg 49
|||||||| ||||||| ||||||||||| | |||||||||||
Sbjct: 112 ttactactacctccgtcccaaaatataacaacttttagctttg 70
>RF00906;MIR1122;AAAA02006989.1/4212-4341 39946:Oryza sativa
Indica Group
Length = 130
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaatataaga 36
||||||||||||||| |||||||||||
Sbjct: 4 ctactccctccgttctaaaatataaga 30
>RF00906;MIR1122;AP008216.1/22670503-22670626 39947:Oryza sativa
Japonica Group
Length = 124
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataaga 36
||||||||||||| |||||||||||||
Sbjct: 121 ctactccctccgtcccaaaatataaga 95
>RF00906;MIR1122;CT832702.1/1285-1384 39946:Oryza sativa Indica
Group
Length = 100
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 ttactactccctccgttccaaaatata 33
|||||||||||||||||| ||||||||
Sbjct: 1 ttactactccctccgttctaaaatata 27
>RF00906;MIR1122;AL662977.3/22853-22707 39947:Oryza sativa Japonica
Group
Length = 147
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 actactccctccgttccaaaatataag 35
|||||||||||||| ||||||||||||
Sbjct: 145 actactccctccgtcccaaaatataag 119
>RF00906;MIR1122;AAAA02015207.1/7418-7517 39946:Oryza sativa Indica
Group
Length = 100
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 ttactactccctccgttccaaaatata 33
|||||||||||||||||| ||||||||
Sbjct: 100 ttactactccctccgttctaaaatata 74
>RF00906;MIR1122;AC136219.2/91733-91617 39947:Oryza sativa Japonica
Group
Length = 117
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataaga 36
|||||||||||||| ||||||||||||
Sbjct: 114 ctactccctccgtttcaaaatataaga 88
>RF00906;MIR1122;AACV01012472.1/10900-10769 39947:Oryza sativa
Japonica Group
Length = 132
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 actactccctccgttccaaaatataag 35
|||||||||||||| ||||||||||||
Sbjct: 130 actactccctccgtcccaaaatataag 104
>RF00906;MIR1122;AAAA02004209.1/3478-3367 39946:Oryza sativa
Indica Group
Length = 112
Score = 46.1 bits (23), Expect = 7e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaatataagatgttttagctttg 49
|||||||||||| |||||||||||| |||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagcatttttagctttg 43
>RF00906;MIR1122;AACV01008813.1/4556-4689 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaatata 33
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaaatata 27
>RF00906;MIR1122;AAAA02034107.1/9075-8937 39946:Oryza sativa Indica
Group
Length = 139
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataaga 36
||||||||||||| |||||||||||||
Sbjct: 136 ctactccctccgtcccaaaatataaga 110
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 actactccctccgttccaaaatataag 35
||||| |||||||||||||||||||||
Sbjct: 3 actacaccctccgttccaaaatataag 29
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 242 ctactccctccgtcccaaaatataag 217
>RF00906;MIR1122;AC153121.15/95512-95668 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
|||||||||||||| |||||||||||
Sbjct: 154 ctactccctccgtttcaaaatataag 129
>RF00906;MIR1122;ABXC01006180.1/72632-72485 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||||||||| |||||||
Sbjct: 144 tactccctccgttccaaattataaga 119
>RF00906;MIR1122;ABXC01001527.1/885-965 4558:Sorghum bicolor
(sorghum)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||||||||| ||||||
Sbjct: 4 ctactccctccgttccaaattataag 29
>RF00906;MIR1122;ABXC01002968.1/30248-30403 4558:Sorghum bicolor
(sorghum)
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||||||||| ||||||
Sbjct: 4 ctactccctccgttccaaattataag 29
>RF00906;MIR1122;ABXC01006238.1/21919-22080 4558:Sorghum bicolor
(sorghum)
Length = 162
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaatataagatgttttagcttt 48
|||||||||||||||| | ||||||| ||||| |||||
Sbjct: 5 tactccctccgttccacattataagacgttttggcttt 42
>RF00906;MIR1122;ABXC01000646.1/88636-88479 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||||||||| ||||||
Sbjct: 155 ctactccctccgttccaaattataag 130
>RF00906;MIR1122;ABXC01002366.1/89795-89952 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||||||||| ||||||
Sbjct: 155 ctactccctccgttccaaattataag 130
>RF00906;MIR1122;DQ154924.1/3536-3603 4571:Triticum turgidum
Length = 68
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaata 31
||||||||||||||||||||||
Sbjct: 4 ctactccctccgttccaaaata 25
>RF00906;MIR1122;AY491681.1/77211-77302 4568:Triticum monococcum
Length = 92
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||| |||||||||||||
Sbjct: 88 tactccctccgtcccaaaatataaga 63
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaata 31
||||||||||||||||||||||
Sbjct: 4 ctactccctccgttccaaaata 25
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
|||||||||||||||| |||||||||
Sbjct: 165 ctactccctccgttcctaaatataag 140
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
|||||||||||||||| |||||||||
Sbjct: 165 ctactccctccgttcctaaatataag 140
>RF00906;MIR1122;AAAA02032192.1/8285-8403 39946:Oryza sativa
Indica Group
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 actactccctccgttccaaaatataa 34
|||||||||||||||| |||||||||
Sbjct: 3 actactccctccgttctaaaatataa 28
>RF00906;MIR1122;AP008209.1/35984076-35984203 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 125 ctactccctccgtcccaaaatataag 100
>RF00906;MIR1122;AAAA02026282.1/2845-2975 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataaga 30
>RF00906;MIR1122;AC111016.2/25572-25452 39947:Oryza sativa Japonica
Group
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||| |||||||||||||
Sbjct: 117 tactccctccgtcccaaaatataaga 92
>RF00906;MIR1122;AACV01002075.1/518-362 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 154 ctactccctccgtcccaaaatataag 129
>RF00906;MIR1122;AAAA02013156.1/16499-16354 39946:Oryza sativa
Indica Group
Length = 146
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaatataagatgtttta 43
||||| ||||||||| |||||||||||| |||||
Sbjct: 4 ctacttcctccgttctaaaatataagatatttta 37
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||| |||||||||||||
Sbjct: 131 tactccctccgtcccaaaatataaga 106
>RF00906;MIR1122;AAAA02035134.1/58354-58198 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 154 ctactccctccgtcccaaaatataag 129
>RF00906;MIR1122;AC090873.4/89374-89493 4530:Oryza sativa (rice)
Length = 120
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataaga 30
>RF00906;MIR1122;AC226266.1/92361-92224 63629:Oryza minuta
Length = 138
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||| |||||||||||||
Sbjct: 134 tactccctccgtcccaaaatataaga 109
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||||||| ||||||||
Sbjct: 159 ctactccctccgttccacaatataag 134
>RF00906;MIR1122;AAAA02003606.1/3920-3764 39946:Oryza sativa Indica
Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 154 ctactccctccgtcccaaaatataag 129
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||| |||||||||||||
Sbjct: 109 tactccctccgtcccaaaatataaga 84
>RF00906;MIR1122;AP008209.1/8919908-8919797 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 109 ctactccctccgtcccaaaatataag 84
>RF00906;MIR1122;AACV01021941.1/12785-12674 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||| ||||||||||||||||||||
Sbjct: 109 ctactacctccgttccaaaatataag 84
>RF00906;MIR1122;AP008213.1/28683389-28683301 39947:Oryza sativa
Japonica Group
Length = 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaata 31
||||||||||||||||||||||
Sbjct: 86 ctactccctccgttccaaaata 65
>RF00906;MIR1122;AACV01021306.1/37655-37776 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||| |||||||||||||
Sbjct: 118 tactccctccgtcccaaaatataaga 93
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 9 actactccctccgttccaaaatataagatgtttt 42
|||||||||||||| | ||||||||||| |||||
Sbjct: 3 actactccctccgtcctaaaatataagaagtttt 36
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
||||||||||||||| ||||||||||
Sbjct: 76 tactccctccgttcctaaatataaga 51
>RF00906;MIR1122;AP008216.1/11618978-11618822 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 154 ctactccctccgtcccaaaatataag 129
>RF00906;MIR1122;AP003410.4/123214-123103 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 109 ctactccctccgtcccaaaatataag 84
>RF00906;MIR1122;AP008207.1/42089526-42089634 39947:Oryza sativa
Japonica Group
Length = 109
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtcccaaaatataag 29
>RF00906;MIR1122;AAAA02006623.1/10234-10353 39946:Oryza sativa
Indica Group
Length = 120
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||| |||||||||||||
Sbjct: 116 tactccctccgtcccaaaatataaga 91
>RF00906;MIR1122;AP008213.1/3607812-3607697 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 113 ctactccctccgtcccaaaatataag 88
>RF00906;MIR1122;AAAA02034091.1/42794-42914 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||| |||||||||||||||
Sbjct: 117 tactccctccattccaaaatataaga 92
>RF00906;MIR1122;AL662959.3/95147-95258 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtcccaaaatataag 29
>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 109 ctactccctccgtcccaaaatataag 84
>RF00906;MIR1122;AAAA02000569.1/43583-43659 39946:Oryza sativa
Indica Group
Length = 77
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtcccaaaatataag 29
>RF00906;MIR1122;AACV01025228.1/13353-13452 39947:Oryza sativa
Japonica Group
Length = 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtcccaaaatataag 29
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 tactactccctccgttccaaaatata 33
||||||||||||||| ||||||||||
Sbjct: 2 tactactccctccgtcccaaaatata 27
>RF00906;MIR1122;AC078829.10/4988-5143 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgttccaaaatataag 35
||||||||||||| ||||||||||||
Sbjct: 153 ctactccctccgtcccaaaatataag 128
>RF00906;MIR1122;AP008218.1/18423778-18423640 39947:Oryza sativa
Japonica Group
Length = 139
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 actccctccgttccaaaatata 33
||||||||||||||||||||||
Sbjct: 6 actccctccgttccaaaatata 27
>RF00906;MIR1122;AP004994.2/80471-80627 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||| |||||||||||||
Sbjct: 153 tactccctccgtcccaaaatataaga 128
>RF00906;MIR1122;AC093492.3/33191-33068 39947:Oryza sativa Japonica
Group
Length = 124
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgttccaaaatataaga 36
|||||||||||| |||||||||||||
Sbjct: 120 tactccctccgtcccaaaatataaga 95
>RF00906;MIR1122;AACV01023162.1/1695-1577 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 actactccctccgttccaaaatataa 34
|||||||||||||||| |||||||||
Sbjct: 3 actactccctccgttctaaaatataa 28
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 9 actactccctccgttccaaaatataa 34
|||||||||||||| |||||||||||
Sbjct: 117 actactccctccgtcccaaaatataa 92
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgttccaaaatataag 35
|||||||||||||||| |||||||||
Sbjct: 4 ctactccctccgttcctaaatataag 29
